| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BS168_reference_genome | 3,253,024 | T→G | 19.1% | K142T (AAG→ACG) | comA ← | two‑component response quorum‑sensing regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 3,253,024 | 0 | T | G | 19.1% | 140.5 / 3.1 | 71 | K142T (AAG→ACG) | comA | two‑component response quorum‑sensing regulator |
| Reads supporting (aligned to +/- strand): ref base T (20/36); new base G (12/3); total (32/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.11e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CTGTATTCAATGGACCGCTTGCTTAAATGAAGGGCATCTGCGATTTCTTGGTTTGTAAATCCCTTTTCAACTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGTGGTATATGTATTGGGTGATCTTTTCTTTAGATTCCGTTTTGCTGATGGCACCGTG > BS168_reference_genome/3252886‑3253148 | cTGTATTCAATGGACCGCTTGCTTAAATGAAGGGCATCTGCGATTTCTTGGTTTGTAAATCCCTTTTCAACTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCt < 7:170787/139‑1 (MQ=255) tATTCAATGGACCGCTTGCTTAAATGAAGGGCATCTGCGATTTCTTGGTTTGTAAATCCCTTTTCAACTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGGttgg > 6:55295/1‑137 (MQ=255) tATTCAATGGACCGCTTGCTTAAATGAAGGGCATCTGCGATTTCTTGGTTTGTAAATCCCTTTTCAACTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTg > 4:126486/1‑139 (MQ=255) ttCAATGGACCGCTTGCTTAAATGAAGGGCATCTGCGATTTCTTGGTTTGTAAATCCCTTTTCAACTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGGgttgtt > 3:296571/1‑139 (MQ=255) aTGGACCGCTTGCTTAAATGAAGGGCATCTGCGATTTCTTGGTTTGTAAATCCCTTTTCAACTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGtttttt > 8:48312/1‑139 (MQ=255) tGGACCGCTTGCTTAAATGAAGGGCATCTGCGATTTCTTGGTTTGTAAATCCCTTTTCAACTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGtttttt > 5:402743/1‑138 (MQ=255) tGGACCGCTTGCTTAAATGAAGGGCATCTGCGATTTCTTGGTTTGTAAATCCCTTTTCAACTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTg > 4:393080/1‑139 (MQ=255) tGGACCGCTTGCTTAAATGAAGGGCATCTGCGATTTCTTGGTTTGTAAATCCCTTTTCAACTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCGTTGTTTTTTg > 2:33982/1‑139 (MQ=255) gACCGCTTGCTTAAATGAAGGGCATCTGCGATTTCTTGGTTTGTAAATCCCTTTTCAACTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCt < 4:41091/139‑1 (MQ=255) gACCGCTTGCTTAAATGAAGGGCATCTGAGATTTCTTGGTTTGTAAATCCCTTTTCAACTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCt < 4:389506/139‑1 (MQ=255) aCCGCTTGCTTAAATGAAGGGCATCTGCGATTTCTTGGTTTGTAAATCCCTTTTCAACTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGGGTtttttttttgtg > 2:274586/1‑135 (MQ=255) gcttgcttAAATGAAGGGCATCTGCGATTTCTTGGTTTGTAAATCCCTTTTCAACTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTTCTggat > 6:135178/1‑136 (MQ=255) cttgcttAAATGAAGGGCATCTGCGATTTCTTGGTTTGTAAATCCCTTTTCAACTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTTCTGAGt > 3:7314/1‑138 (MQ=255) aaaTGAAGGGCATCTGCGATTTCTTGGTTTGTAAATCCCTTTTCAACTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAg < 3:126486/137‑1 (MQ=255) aaaTGAAGGGCATCTGCGATTTCTTGGTTTGTAAATCCCTTTTCAACTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAg < 7:411144/137‑1 (MQ=255) aaTGAAGGGCATCTGCGATTTCTTGGTTTGTAAATCCCTTTTCAACTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTg > 4:380061/1‑139 (MQ=255) gggCATCTGCGATTTCTTGGTTTGTAAATCCCTTTTCAACTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCGTTTTTTTTTTATGTGTCATCAGCTGTTTaa > 2:156576/1‑138 (MQ=255) ggCATCTGCGATTTCTTGGTTTGTAAATCCCTTTTCAACTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTTGTGGGTCATCAGCTGTTTAAAg > 4:328540/1‑139 (MQ=255) ggCATCTGCGATTTCTTGGTTTGTAAATCCCTTTTCAACTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTTCTGGGTCATCAGCGGGTTTAAg > 4:129621/1‑139 (MQ=255) aTCTGCGATTTCTTGGTTAGTAAATCCCTTTTCAACTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACTTCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGATTTTTGCTGAGTCATCACCTGTTTATAGTa > 8:132060/1‑138 (MQ=255) tCTGCGATTTCTTGGTTTGTAAATCCCTTTTCAACTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCGTTGTTTTTTTCTGAGTCATAAGCTGTTTAAAGTaat > 4:92776/1‑138 (MQ=255) aTTTCTTGGTTTGTAAATCCCTTTTCAACTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGGGTTGTTTTTTTGTGGGTAATAAGCGTTTTAAATTTAGAaaaa > 4:29281/1‑138 (MQ=255) tttCTTGGTTTGTAAATCCCTTTTCAACTTCTTGAAGAATGAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAAt < 1:419763/138‑1 (MQ=255) aTCCCTTTTCAACTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTcc < 3:380061/139‑1 (MQ=255) aTCCCTTTTCAACTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCGTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTcc < 4:9218/139‑1 (MQ=255) aaCTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTAc < 1:156576/138‑1 (MQ=255) aaCTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACg < 1:33982/139‑1 (MQ=255) aaCTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACg < 6:422406/139‑1 (MQ=255) aaCTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACg < 7:304605/139‑1 (MQ=255) aaCTTCTTGAAGAATCAGGCATTCTCTAGGTGGGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTGTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACg < 6:190815/139‑1 (MQ=255) acagcttGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCGTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGt < 5:52298/135‑1 (MQ=255) aatgcttGAAGAATCATTCATTCTCTTGGTGTGAGCTCATCTTGTTATTTTTGAGTGTAAGGAGCAGGCTTTGTTTTTTTCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTAc < 1:172434/133‑1 (MQ=255) aCTTCTTGAAGAATCAGTCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGt < 6:402743/139‑1 (MQ=255) aCTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGt < 5:135178/139‑1 (MQ=255) aCTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGt < 4:7314/139‑1 (MQ=255) aCTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGt < 3:328540/139‑1 (MQ=255) aCTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGAAAATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGt < 6:33900/139‑1 (MQ=255) cttcttGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGGCATGAGCAGTTTAAAGTAATCAAAATAGACTAAAATTTCTACGTTTACTACGTg > 4:213562/1‑139 (MQ=255) gaagaaTCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGTGGta < 3:92776/136‑1 (MQ=255) gaagaaTCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGTGGta < 7:48312/136‑1 (MQ=255) gaagaaTCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGTGGta < 3:393080/136‑1 (MQ=255) gaagaaTCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCGTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGTGGta < 2:336451/136‑1 (MQ=255) gaaTCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGTGGTATATGTa < 3:29281/139‑1 (MQ=255) gaaTCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGTGGTATATGTa < 3:129621/139‑1 (MQ=255) aGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGGGTTGTTTTTTTGTGAGTGATCATCTGTTTTAAGTTAGCAAAATAGACTTAAATTTCTGCGTTGTTTACGGGGTTTATGttagttg > 6:52298/1‑133 (MQ=255) aGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGTGGTATATGTAtttg < 7:367250/138‑3 (MQ=255) gacagctctAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGTGGTATATGTATTGGGTg < 7:421495/134‑1 (MQ=255) aTTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGTGGTATATGTATTGGGTGAt < 5:412312/139‑1 (MQ=255) tctcTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGGTTTTTTTTTTTATGTGTCATAATCTGTTTAAAGTTATCAAAATCTACTAAAATTTATCCGTTGAGTACGTGGTATATGTATTTGGTGAtct > 2:384629/1‑139 (MQ=255) ctctAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGTGGTATATGTATTGGGTGAtctt > 7:402681/1‑139 (MQ=255) gtgtGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGTGGTATATGTATTGGGTGAtcttttcttt < 1:384629/139‑1 (MQ=255) tgAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGTGGTATATGTATTGGGTGATCTTTTCTTTAGa < 5:378124/139‑1 (MQ=255) aGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGGGTTGTTTTTTTGGGGTTACTGATCGGGTTTAATTTAGCAAAATAGACAAAAATTTATCCGGTGATTTCCTGGTTTTTGTTTTTGGTGATGTtttatttatgtt > 2:353564/1‑135 (MQ=255) aGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGGGTTGTTTTTTTCTGGGTCATCAGCTGTTTTAAGTTAGCAAAATAGACTAAAATTTCTCCGTTGAGTACGTGGTATTTGTTTTTGGTGTtcttttctttgtgtg > 8:421495/1‑134 (MQ=255) aGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGGTGAGTCATCAGGGGTTTAAAGTAAGCAAAATCGACTAAAATTTCTGCGTTGAGTACGTGGTATATGTATTGGGTGGTGTTTTGTTTTGAtt > 6:342364/1‑139 (MQ=255) aGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGTGGTATATGTATTGGGTGATCTTTTCTTTAGAtt > 5:164074/1‑139 (MQ=255) aGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACGAAAATTTATCCGGTGCGTACGTGGTATATGTATTTGGTGATCTTTTCTTTATAtt > 1:42026/1‑139 (MQ=255) aGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCGTTTTTTTTTTGTGAGTGATGACCAGTTTTAAGTTATCAAAAAACAATAAAAATTATCCGTTTAGTACGTGGTTTATTTTTTTGGTGGtgttttatttttgtt > 2:163051/1‑134 (MQ=255) aGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCGTTGTTTTTTTCTGAGTCATCAGCTGTTTAAAGTTAGCAAAAAAGACTAAAATTTATACGGTGAGTACGTGGTATTTTTTTTGGGTGATCTTTTATTTAGAtt > 3:306981/1‑139 (MQ=255) aGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCGTTGTTTTTTGGTTAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACGAAAATTTTTACGTTGAGTTCGTGGTATATGTATTGGGTTATGTTTTGTTTTGAtt > 1:221769/1‑139 (MQ=255) gTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACg > 3:168246/1‑95 (MQ=255) gTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACg < 4:168246/95‑1 (MQ=255) gTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGTGGTATATGTATTGGGTGATCTTTTCTTTAGATTCCGTTTTGCt > 5:151026/1‑139 (MQ=255) cTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGTGGTATATGTATTGGGTGATCTTTTCTTTAGATTCCGTTTTGCTGa < 6:151026/138‑1 (MQ=255) tttGAGAGGAAGGAGCCGGCGTTGTTTTTTGCTGAGTCATCAGCGGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGTGGTATATGTATTGGGTGATCTTTTCTTTAGATTCCGTTTTGCTGATGGc > 1:223534/1‑139 (MQ=255) tGAGATGAAGGAGGCGGCTTTCTTTTATGCTGAGTCATCAGCTGTTTAAAGAAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGTGGTATATGTATTGGGTGATCTTATCTTTAGATTCCGTTTTGCTGATGGCa < 7:132060/138‑1 (MQ=255) tGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGTGGTATATGTATTGGGTGATCTTTTCTTTAGATTCCGTTTTGCTGATGGCa < 3:177548/138‑1 (MQ=255) tGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGTGGTATATGTATTGGGTGATCTTTTCTTTAGATTCCGTTTTGCTGATGGCa < 2:223534/138‑1 (MQ=255) tGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGTGGTATATGTATTGGGTGATCTTTTCTTTAGATTCCGTTTTGCTGATGGCa < 1:353564/138‑1 (MQ=255) tGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGTGGTATATGTATTGGGTGATCTTTTCTTTAGATTCCGTTTTGCTGATGGCa < 5:55295/138‑1 (MQ=255) aggaaggaGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGTGGTATATGTATTGGGTGATCTTTTCTTTAGATTCCGTTTTGCTGATGGCACCGTg < 3:310654/139‑1 (MQ=255) gaaggaGCCGGCTTTGTTTTTTTCTGAGTCATCACCTGTTTAAAGTAATCAAAATCGACTAAAATTTATGCGGTGAGTACGTGGTATTTTTATTTGGTGATATTTTATTTAGATTACGGTTTTCTGATGGCCCCGTg > 1:323463/1‑137 (MQ=255) cGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGTGGTATATGTATTGGGTGATCTTTTCTTTAGATTCCGTTTTGCTGATGGCa < 2:232017/124‑1 (MQ=255) cGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATAGACTAAAATTTCTCCGTTGAGTACGTGGTATATGTATTGGGTGATCTTTTCTTTAGATTCCGTTTTTCTGATGGCa > 1:232017/1‑124 (MQ=255) | CTGTATTCAATGGACCGCTTGCTTAAATGAAGGGCATCTGCGATTTCTTGGTTTGTAAATCCCTTTTCAACTTCTTGAAGAATCAGGCATTCTCTAGGTGTGAGCACATCTTGTTCTTTTTGAGAGGAAGGAGCCGGCTTTGTTTTTTGCTGAGTCATCAGCTGTTTAAAGTAAGCAAAATCGACTAAAATTTCTCCGTTGAGTACGTGGTATATGTATTGGGTGATCTTTTCTTTAGATTCCGTTTTGCTGATGGCACCGTG > BS168_reference_genome/3252886‑3253148 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |