| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BS168_reference_genome | 3,308,994 | A→G | 5.0% | K43R (AAA→AGA) | yutJ → | putative NADH dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 3,308,994 | 0 | A | G | 5.0% | 256.3 / 3.0 | 81 | K43R (AAA→AGA) | yutJ | putative NADH dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base A (29/47); new base G (2/2); total (31/50) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.39e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGAATTCAAATGAAAAAATTGGTCTTGATCGGCGGAGGTTACGGGAACATGCGCGTTCTTCATCGCTTATTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGATATCACATCAATTGATATTGTACAAAAACAAGTGCTGTTCCA > BS168_reference_genome/3308858‑3309132 | ggAATTCAAATGAAAAAATTGGTCTTGATCGGCGGAGGTTACGGGAACATGCGCGTTCTTCATCGCTTATTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGaaaa < 4:203462/139‑1 (MQ=255) aaTTCAAATGAAAAAATTGGTCTTGATCGGCGGAGGTTACGGGAACATGCGCGTTCTTCATCGCTTATTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGaaaa > 6:200666/1‑137 (MQ=255) aaTTCAAATGAAAAAATTGGTCTTGATCGGCGGAGGTTACGGGAACATGCGCGTTCTTCATCGCTTATTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACa < 2:4635/139‑1 (MQ=255) aaTTCAAATGAAAAAATTGGTCTTGATCGGCGGAGGTTACGGGAACATGCGCGTTCTTCATCGCTTATTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACa < 3:137278/139‑1 (MQ=255) aaTTCAAATGAAAAAATTGGTCTTGATCGGCGGAGGTTACGGGAACATGCGCGTTCTTCATCGCTTATTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACa < 6:220260/139‑1 (MQ=255) aTTCAAATGAAAAAATTGGTCTTGATCGGCGGAGGTTACGGGAACATGCGCGTTCTTCATCGCTTATTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAg < 1:80543/139‑1 (MQ=255) ttCAAATGAAAAAATTGGTCTTGATCGGCGGAGGTTACGGGAACATGCGCGTTCTTCATCGCTTATTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGa < 1:42392/139‑1 (MQ=255) ttCAAATGAAAAAATTGGTCTTGATCGGCGGAGGTTACGGGAACATGCGCGTTCTTCATCGCTTATTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGa < 7:417860/139‑1 (MQ=255) aaaaaaTTGGTCTTGATCGGCGGAGGTTACGGGAACATGCGCGTTCTTCATCGCTTATTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAAtattat > 7:175809/1‑138 (MQ=255) aaaTTGGTCTTGATCGGCGGAGGTTACGGGAACATGCGCGTTCTTCATCGCTTATTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGccc < 3:356327/139‑1 (MQ=255) aTTGGTCTTGATCGGCGGAGGTTACGGGAACATGCGCGTTCTTCATCGCTTATTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCtt < 2:149097/139‑1 (MQ=255) gATCGGCGGAGGTTACGGGAACATGCGCGTTCTTCATCGCTTATTGCCAAACCAGCTGCCTGATGATGTTTCAATGACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCa < 7:127200/136‑1 (MQ=255) gATCGGCGGAGGTTACGGGAACATGCGCGTTCTTCATCGCTTATTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCa < 7:296117/136‑1 (MQ=255) aTCGGCGGAGGGTACGGGAACATGCGCGTTCTTCATCGCTTATTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGca < 2:392576/139‑1 (MQ=255) aGGTTACGGGAACATGCGCGTTCTTCATCGCTTATTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCt < 1:322231/139‑1 (MQ=255) gTTACGGGAACATGCGCGTTCTTCATCGCTTATTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCTCAGGCACAATTTCTGa > 7:6913/1‑139 (MQ=255) ttACGGGAACATGCGCGTTCTTCATCGCTTATTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGAc < 3:214230/139‑1 (MQ=255) ttACGGGAACATGCGCGTTCTTCATCGCTTATTGCCAAACCAGCTGCCTGATGATGTATCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGAc < 2:105274/139‑1 (MQ=255) cGGGAACATGCGCGTTCTTCATCGCTTATTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAAtatta > 5:353029/1‑108 (MQ=255) cGGGAACATGCGCGTTCTTCATCGCTTATTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAAtatta < 6:353029/108‑1 (MQ=255) cGGGAACATGCGCGTTCTTCATCGCTTATTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACca < 3:213422/138‑1 (MQ=255) cGGGAACATGCGCGTTCTTCATCGCTTATTGCCAAACCAGCTGCCTGATGATGCTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACcat < 7:279993/139‑1 (MQ=255) agaTGCTCGTTGATCATCGCTTAATGCCAAACCAGCTGGCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGATAACAGAATATTATGCCCTTGCCGCAGGGACAATTTCTGACGATCatat < 6:294818/137‑1 (MQ=255) aCATGCGCGTTCTTCATCGCTTATTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAGATCAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCatat > 3:269110/1‑139 (MQ=255) aCATGCGCGTTCTTCATCGCTTATTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAGAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCatat > 3:269114/1‑139 (MQ=255) cATGCGCGTTCTTCATCGCTTATTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCatat > 5:58211/1‑138 (MQ=255) aTCGCTTATTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTCTGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTcc < 2:147405/138‑1 (MQ=255) ttATTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACa > 6:224735/1‑75 (MQ=255) ttATTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACa < 5:224735/75‑1 (MQ=255) aTTGCCAAACCAGCTGCCTGATGATGTTTCCATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGACCTTGCAGCAGGCACAATTTCTGACCATCATAGCAGAGTGTCATTCCCAGAGCAc > 2:37588/1‑139 (MQ=255) aTTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCAc > 7:118686/1‑139 (MQ=255) aTTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCAc > 1:197691/1‑139 (MQ=255) ttGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCAcc < 8:113927/139‑1 (MQ=255) ccAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCt < 8:6913/138‑1 (MQ=255) aaCCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGcc > 8:283489/1‑139 (MQ=255) cAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTgg < 1:160584/139‑1 (MQ=255) cAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTgg < 2:197691/139‑1 (MQ=255) cAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTgg < 2:367952/139‑1 (MQ=255) gCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCAcc > 2:271260/1‑128 (MQ=255) gCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCAcc < 1:271260/128‑1 (MQ=255) gCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGAt > 4:186740/1‑139 (MQ=255) gCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGAt < 8:175809/139‑1 (MQ=255) atgatgTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATa < 5:200666/139‑1 (MQ=255) tttCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGa > 4:331692/1‑139 (MQ=255) aaTCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGatat < 5:288856/138‑1 (MQ=255) aTCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGATATca > 5:263201/1‑139 (MQ=255) aCGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGATATcaca < 7:238550/138‑1 (MQ=255) cGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGAc > 4:196778/1‑74 (MQ=255) cGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGAc < 3:196778/74‑1 (MQ=255) aaatGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGATATCACATCAAt < 4:145739/135‑1 (MQ=255) aaTTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGATATCACATCAAt < 7:283489/138‑1 (MQ=255) aaTTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGATATCACATCAAt < 3:95581/138‑1 (MQ=255) aTTGACAGAAATCCTTATCTCTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCAAAATTTCTGAGCATCATATCAGAGTGTCATTCCCAGAGCACCGTCGCGTGGATGTCCAATACGGTGATATCACATCAAtt < 7:179757/138‑1 (MQ=255) aCAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGATATCACATCAATTGatat < 8:118686/139‑1 (MQ=255) aCAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGATATCACATCAATTGatat < 2:303867/139‑1 (MQ=255) aGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCatat > 1:37347/1‑71 (MQ=255) aGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCatat < 2:37347/71‑1 (MQ=255) aGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGATATCACATCAATTGatat < 7:294386/137‑1 (MQ=255) aGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGATATCACATCAATTGatat > 8:294386/1‑137 (MQ=255) aGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGATATCACATCAATTGATATTg > 5:341138/1‑139 (MQ=255) aTCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGATATCACATCAATTGATATTGTACa < 3:246253/139‑1 (MQ=255) aTCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGATATcaca > 8:275206/1‑116 (MQ=255) aTCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGATATcaca < 7:269111/116‑1 (MQ=255) aTCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGATATcaca < 7:275206/116‑1 (MQ=255) aTCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGATATcaca > 8:269111/1‑116 (MQ=255) aTCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGATATCACATCAATTGATATTGTACAAAAAc > 5:140233/1‑138 (MQ=255) tGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCata < 6:49448/55‑1 (MQ=255) tGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCata > 5:49448/1‑55 (MQ=255) gCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCagag > 1:239316/1‑74 (MQ=255) gCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCagag < 2:239316/74‑1 (MQ=255) cTTGAGAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGATATCACATCAATTGATATTGTACAAAAACAAGTGc < 4:269110/137‑1 (MQ=255) cTTGAGAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGATATCACATCAATTGATATTGTACAAAAACAAGTGc < 4:269114/137‑1 (MQ=255) cTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTTTCATTCCCAGAGCACCCTCGCCTgg < 1:268895/86‑1 (MQ=255) cTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGTGCACCCTCGCCTGGATGTCCAATACGGTGATATCACATCAATTGATATTGTACAAAAACAAGTGCTg > 3:401471/1‑139 (MQ=255) cTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGatat > 3:326363/1‑105 (MQ=255) cTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGatat < 4:326363/105‑1 (MQ=255) cTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGATATCACAt < 7:171960/110‑1 (MQ=255) cTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGATATCACAt > 8:171960/1‑110 (MQ=255) cTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGATATCACATCAATTGATATTGTACAAAAACAAGTGc < 3:94788/137‑1 (MQ=255) cTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGATATCACATCAATTGATATTGTACAAAAACAAGTGCTg > 2:178356/1‑139 (MQ=255) cTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGATATCACATCAATTGATATTGTACAAAAACAAGTGCTg > 5:188914/1‑139 (MQ=255) cTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTCTCATTCCCAGAGCACCCTCGCCTgg > 2:268895/1‑86 (MQ=255) cTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATATCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGATATCACATCAATTGATATTGTACAAAAACAAGTGCTg > 5:152497/1‑139 (MQ=255) aaaCAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGATATCACATCAATTGATATTGTACAAAAACAAGTGCTGTTCCa < 4:224388/139‑1 (MQ=255) | GGAATTCAAATGAAAAAATTGGTCTTGATCGGCGGAGGTTACGGGAACATGCGCGTTCTTCATCGCTTATTGCCAAACCAGCTGCCTGATGATGTTTCAATCACGTTAATTGACAGAAATCCTTATCACTGCTTGAAAACAGAATATTATGCCCTTGCCGCAGGCACAATTTCTGACCATCATATCAGAGTGTCATTCCCAGAGCACCCTCGCCTGGATGTCCAATACGGTGATATCACATCAATTGATATTGTACAAAAACAAGTGCTGTTCCA > BS168_reference_genome/3308858‑3309132 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |