| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BS168_reference_genome | 921,462 | G→C | 5.7% | G330A (GGG→GCG) | sxzZ → | xenosiderophore schizokinen (dihydroxamate) transporter (permease) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 921,462 | 0 | G | C | 5.7% | 294.8 / 6.9 | 82 | G330A (GGG→GCG) | sxzZ | xenosiderophore schizokinen (dihydroxamate) transporter (permease) |
| Reads supporting (aligned to +/- strand): ref base G (38/39); new base C (2/3); total (40/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.78e-01 | |||||||||||
TTCCGCTGTTTTGGGTGCCATTTTGCTTGTTTGCGCGGATATCGGTGCGCGATATATCATTATGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAACAGCTGCTGTACTCATCATAAGCGCTGGTCTCGGACAAAGGTTTATTCCTCCCTGG > BS168_reference_genome/921325‑921600 | ttCCGCTGTTTTGGGTGCCATTTTGCTTGTTTGCGCGGATATCGGTGCGCGATATATCATTATGCCTCAGGAAGTTCCTGTCGGGGTCATGCCCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAggggg > 8:295559/1‑139 (MQ=255)ttCCGCTGTTTTGGGTGCCATTTTGCTTGTTTGCGCGGATATCGGTGCGCGATATATCATTATGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAggggg > 7:18407/1‑139 (MQ=255)ttCCGCTGTTTTGGGTGCCATTTTGCTTGTTTGCGCGGATATCGGTGCGCGATATATCATTATGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAggggg > 7:136255/1‑139 (MQ=255)taacGCTGTTTTTTGTGCCATTTTGCTTGTTTGCGCGGATATCGGTGCGCGATATATCATTATGCCTCAGGAAGTTCCTGTCTGGGTCATGAAAGCCATCATAGGAATGCCTGTTTTTGTGTACATAGCAAGATggggt > 1:174884/4‑138 (MQ=255) cGCTGTTTTGGGTGCCATTTTGCTTGTTTGCGCGGATATCGGTGCGCGATATATCATTATGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCg < 2:300501/139‑1 (MQ=255) cGCTGTTTTGGGTGCCATTTTGCTTGTTTGCGCGGATATCGGTGCGCGATATATCATTATGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCg < 7:394124/139‑1 (MQ=255) gCTGTTTTGGGTGCCATTTTGCTTGTTTGCGCGGATATCGGTGCGCTATATATCATTATGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGa < 3:69238/139‑1 (MQ=255) gCTGTTTTGGGTGCCATTTTGCTTGTTTGCGCGGATATCGGTGCGCGATATATCATTATGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGa < 4:322340/139‑1 (MQ=255) ggTGCCATTTTGCTTGTTTGCGCGGATATCGGTGCGCGATATATCATTATGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGa > 1:334991/1‑138 (MQ=255) cATTTTGCTTGTTTGCGCGGATATCGGTGCGCGATATATCATTATGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTc > 6:83778/1‑139 (MQ=255) tGCTTGTTTGCGCGGATATCGGTGCGCGATATATCATTATGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGttt < 5:91086/138‑1 (MQ=255) cgcgGATATCGGTGCGCGATATATCATTATGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTg < 3:350215/139‑1 (MQ=255) atatCGGTGCGCGATATATCATTATGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCt > 6:401854/1‑139 (MQ=255) cgcgATATATCATTATGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAaaaga > 3:191529/1‑137 (MQ=255) gcgATATATCATTATGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAaaagaaag > 5:204613/1‑139 (MQ=255) tCATTATGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGAt < 5:401854/138‑1 (MQ=255) tCATTATGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGAt < 4:283997/138‑1 (MQ=255) tATGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGAt > 8:64907/1‑134 (MQ=255) tATGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGAt < 7:58232/134‑1 (MQ=255) tATGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGAt < 7:64907/134‑1 (MQ=255) tATGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGAt > 8:58232/1‑134 (MQ=255) tATGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCt > 2:331957/1‑139 (MQ=255) tATGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGACTGAATAGAAAGCATGGATCGTCt > 2:43367/1‑139 (MQ=255) tGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGaaa > 3:363207/1‑91 (MQ=255) tGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGaaa < 4:363207/91‑1 (MQ=255) tGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCttt > 7:219080/1‑139 (MQ=255) tGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCttt > 6:423529/1‑139 (MQ=255) tGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCttt > 5:349113/1‑139 (MQ=255) tGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCttt > 7:367456/1‑139 (MQ=255) tGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCttt > 3:398507/1‑139 (MQ=255) tGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCttt > 8:155699/1‑139 (MQ=255) tGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCttt > 4:244182/1‑139 (MQ=255) tGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGCGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGAt < 4:48431/132‑1 (MQ=255) tGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGCGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGAt > 3:42720/1‑132 (MQ=255) tGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGCGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGAt > 3:48431/1‑132 (MQ=255) tGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGCGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGAt < 4:42720/132‑1 (MQ=255) cAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTg > 4:276605/1‑137 (MQ=255) cAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGt > 1:161416/1‑139 (MQ=255) cAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGt > 3:94249/1‑139 (MQ=255) aGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTgg < 3:276605/137‑1 (MQ=255) aGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGtt > 2:36054/1‑139 (MQ=255) aGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGtt > 8:3006/1‑139 (MQ=255) gAAGTTCCTGTCGGGGTCATGACCGCCATCATAGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTAGTGCGGAGGAAAAGAAAGCATGGTTCGTCTTTTTGGttt > 6:227297/1‑138 (MQ=255) gTTCCTGTCGGGGTCATGACCGCCATCATCGGAATTCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACt < 4:398507/139‑1 (MQ=255) gTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCCAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACt < 7:357710/139‑1 (MQ=255) gTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACt < 8:136255/139‑1 (MQ=255) gTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACt < 3:250246/139‑1 (MQ=255) gTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACt < 5:83778/139‑1 (MQ=255) ttCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTg > 1:189314/1‑139 (MQ=255) ttCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTg > 2:187714/1‑139 (MQ=255) tCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGAt < 3:263899/119‑1 (MQ=255) tCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGAt > 4:263899/1‑119 (MQ=255) ccTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTg < 3:61628/96‑1 (MQ=255) ccTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTg > 4:61628/1‑96 (MQ=255) ggggTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAAc < 2:161416/139‑1 (MQ=255) ggTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAACAg > 1:86312/1‑139 (MQ=255) gTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAACAgc > 8:316461/1‑139 (MQ=255) tGACCGCCATCATCGGAATGCCTGTGTGTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAACAgctgct < 7:155699/139‑1 (MQ=255) gACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAACAGctgctg > 6:308743/1‑139 (MQ=255) ccGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAACAGCTGCTGTa < 1:36054/139‑1 (MQ=255) ccGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAACAGCTGCTGTa < 7:316461/139‑1 (MQ=255) cagCCTTCATCGGAAGTCCGTTGTTTGTGTACAGCGCAAGAATGGGGGCGAATCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGACAGAAGGGATATTCTTTTTGGTTTTACTGGGTTTAACAGCTGCTGTa < 2:174884/137‑1 (MQ=255) ccATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAACAGCTGCTGTa > 3:405807/1‑136 (MQ=255) ccATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAACAGCTGCTGTa < 4:405807/136‑1 (MQ=255) ccATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAACAGCTGCTGTACt > 5:66187/1‑138 (MQ=255) ggAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGa > 2:209264/1‑40 (MQ=255) ggAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGa < 1:209264/40‑1 (MQ=255) ggAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAAc < 1:261181/118‑1 (MQ=255) ggAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAAc > 2:261181/1‑118 (MQ=255) aaTGCCTGTGTTTGTGTACATCGCAAGAAGGGCGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAACAGCTGCTGTACTCATCATAAgcg < 2:351518/139‑1 (MQ=255) aTGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGGTAACAGCTGCTGTACTCATCATAAgcgc < 6:349113/139‑1 (MQ=255) cTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAACAGCTGCTGTACTCATCATAAGCGCTGGt > 6:349134/1‑139 (MQ=255) tgtgTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAACAGCTGCTGTACTCATCATAAGCGCTGGtc > 1:31291/1‑139 (MQ=255) tgtTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAACAGCTGCTGTACTCATCATAAGCGCTGGtc < 1:187714/137‑1 (MQ=255) tgtTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAACAGCTGCTGTACTCATCATAAGCGCTGGtc < 5:423529/137‑1 (MQ=255) tgtgTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAACAGCTGCTGTACTCATCATAAGCGCTGGTCTCGGa < 4:191529/138‑1 (MQ=255) gtgtACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAACAGCTGCTGTACTCATCATAAGCGCTGGTCTCGGACa < 7:3006/139‑1 (MQ=255) tgtACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAACAGCTGCTGTACTCATCATAAGCGCTGGTCTCGGACaa < 7:295559/139‑1 (MQ=255) tgtACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAACAGCTGCTGTACTCATCATAAGCGCTGGTCTCGGACa < 8:219080/138‑1 (MQ=255) tgtACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAACAGCTGCTGTACTCATCATAAGCGCTGGTCTCGGACa > 7:222528/1‑138 (MQ=255) tgtACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAACAGCTGCTGTACTCATCATAAGCGCTGGTCTCGGACa < 2:31291/138‑1 (MQ=255) tgtACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAACAGCTGCTGTACTCATCATAAGCGCTGGTCTCGGACa < 3:244182/138‑1 (MQ=255) tCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAACAGCTGCTGTACTCATCATAAGCGCTGGTCTCGGACAAAGGttt > 8:185930/1‑139 (MQ=255) agaagGGGGGCGAAGCGATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAACAGCTGCTGTACTCATCATAAGCGCTGGTCTCGGACAAAGGTTTATtcc < 8:18407/139‑1 (MQ=255) gaagGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATTGATCGTCTTTTTGGTTTTACTGGGGTTAACAGCTGCTGTACTCATCATAAGCGCTGGTCTCGGACAAAGGTTTATtcct < 5:227297/139‑1 (MQ=255) agGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAACAGCTGCTGTACTCATCATAAGCGCTGGTCTCGGACAAAGGTTTATtcctcc < 1:331957/139‑1 (MQ=255) ggggggCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAACAGCTGCTGTACTCATCATAAGCGCTGGTCTCGGACAAAGGTTTATTCCTccc > 1:237307/1‑139 (MQ=255) gggCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAACAGCTGCTGTACTCAGCATACGCGCTGGTCTCGGACAAAGGTTTATTCCTCCCTgg > 5:242862/1‑139 (MQ=255) | TTCCGCTGTTTTGGGTGCCATTTTGCTTGTTTGCGCGGATATCGGTGCGCGATATATCATTATGCCTCAGGAAGTTCCTGTCGGGGTCATGACCGCCATCATCGGAATGCCTGTGTTTGTGTACATCGCAAGAAGGGGGGCGAAGCTATGAAACTTCGTTTTGGCGTTACTGCGGCTGAAAAGAAAGCATGGATCGTCTTTTTGGTTTTACTGGGGTTAACAGCTGCTGTACTCATCATAAGCGCTGGTCTCGGACAAAGGTTTATTCCTCCCTGG > BS168_reference_genome/921325‑921600 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |