| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BS168_reference_genome | 1,565,774 | G→T | 15.8% | intergenic (‑65/‑75) | ylbA ← / → ylbB | conserved hypothetical protein/putative enzyme |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 1,565,774 | 0 | G | T | 15.8% | 194.3 / 10.1 | 103 | intergenic (‑65/‑75) | ylbA/ylbB | conserved hypothetical protein/putative enzyme |
| Reads supporting (aligned to +/- strand): ref base G (45/34); new base T (2/17); total (47/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.43e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 103 total aligned reads displayed.
TCCATTAAGTCGTCTAGCCAGCTGAGCTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTATTAGATAA > BS168_reference_genome/1565639‑1565907 | tCCATTAAGTCGTCTAGCCAGCTGAGCTCAGCCTTAACCCCTACAAGTCCGCTTTCAGAAAACTTCAACACTGACACCTCCTTATAAAAATAACCTTTCCTGCCAATAATAGTATTAAACCGTTAAACTTTAAATGaa > 8:43062/1‑138 (MQ=255) aaGTCGTCTAGCCAGCTGAGCTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAAtcttct < 3:53235/138‑1 (MQ=255) aGTCGTCTAGCCAGCTGAGCTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCATGACAATCATAGTATGAAAGCGTTAAACTTTAAATGAAtcttcttc > 2:86234/1‑139 (MQ=255) tcTAGCCCGCTGAGCTCCGCCTTAACCCCTTCAAGTCCGCTTTCAGTAACCTTCAACACTGACCCCTCCTTATAAAAAATACCTTTCCTGACAATCATAGTATGAAAGCGGTAAACTTTCAATGAATCTGCTGCtttt > 2:274863/1‑138 (MQ=255) tcTAGCCCGCTGAGCTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCATATAAAAATTACCTTTCCTGACAAACATAGTATGAAAGCGTTAAAATTTAAAATAATCTTCTTCtttt > 6:230509/1‑138 (MQ=255) tcTAGCCAGCTGAGCTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATATTCTTCttttt > 5:245725/1‑138 (MQ=255) tcTAGCCAGCTGAGCTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTGAAACTTTCAATGAATCTTCTTCtttt > 8:298654/1‑138 (MQ=255) tcTAGCCAGCTGAGCTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCAGAGTATGAAAGCGTTAAACTTTCAATGAATGTTCTTCtttt > 2:13980/1‑138 (MQ=255) tcTAGCCAGCTGAGCTCAGCCTTAACCCCTTCAAGTCCGCTGTCAGTAAAATTCACCACTGACCCCGACATATAAAAATTACCATTACTGACAATCATAGTATGAAATCCGTAAAATTTCAAAGAAACTACTTCTTTTg > 6:10438/1‑139 (MQ=255) tcTAGCCAGCTGAGCACAGCCTTAACCCCTTCAAGTCCGCATACAGTAAACATCAACACTGACCCCTCCTTATAAAAATTACCATTCCTGACAAACATAGTATGAAAGCCTTAAACTTTCAATTAATCTTCTTCtttt > 6:4533/1‑138 (MQ=255) ccAGCTGAGCTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCACCACTGACCCCGCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAg > 4:108199/1‑138 (MQ=255) aGCTGAGCTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTAt > 7:377367/1‑139 (MQ=255) cTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCaaaaa > 4:31832/1‑139 (MQ=255) gCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTAACTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATTCAAaaatta > 5:364676/1‑138 (MQ=255) aCCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAAtttt > 6:54760/1‑138 (MQ=255) cccTTCAATTCCGCTTTCAGTAACCTTCAACACGGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTAAAAGTTTCAATGAATCTTCTTCTTTTGAAAGTATGAAAAAATTAATTTTTgac < 5:57244/139‑1 (MQ=255) cccTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTAAAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgac < 3:416108/139‑1 (MQ=255) cacTTCAAGTCCGGTTTCTGTAAACTTCAACACTGACCCCTCTTTAAAAAAATTACGTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATTAATCTTATTCTTTTGAATGTATGCAAAAATTAATTTTTgac < 6:364676/137‑1 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgacga > 3:200532/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgacga > 3:195604/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgacga > 4:71407/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgacga > 4:2402/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgacga > 6:198102/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgacga > 7:176124/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAAATACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGAATGAAAAAATTAAATTTTgacga > 8:395464/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCATATAAAAATTAACTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgacga > 4:389413/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTACTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTAAAACTTTCAATGAATATTCTTCTTTTTAATGTATGCAAAAATTAAATTTTtacga > 3:401653/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCGCCTTATAAAAATTACCTTTCCTGACAAACATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgacga > 1:213870/1‑138 (MQ=255) ttCAAGTCCGCTTTCAGTAAACTTCAACACTGACCACTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTAAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTgacga > 5:201090/1‑138 (MQ=255) ttCAAGTCCGCTTTAAGTAAACTTCAACACTGAACCCTCCTAATAAAAATTAACAATCATGACAATCATAGTATGAAAGCGTTAAACTTTAAATGAATCATCTTCTTATGAAAGTAAGCAAAAATTAAATTTTgaaga > 5:340506/1‑138 (MQ=255) acgTCCGCTTTCAGAAAACTTCAACACTCACCCCTCATTATAAAAATTACATTTCCTGACAATCATAGAATGAAAGCGTTAAAATTTCAATCAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACaa < 1:183237/136‑1 (MQ=255) aatgccGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAAt < 8:67847/135‑1 (MQ=255) aaGTCCGCTTTCAGAAAACTTCAACACTCCCCCCTCCTTAAAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGATAAACTTTCAATGAATGTTGTTCTTTTGAAAGTATGCAAAATTAAAATTTTGACGACaa < 8:377367/138‑1 (MQ=255) ggCTTTCAGTAAAATTAAAAACTGACCCCTCCTTATAAAAATTACATTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTATTCTTTTGAAAGTATTAAAAATTTAATTTTTGACGACAATAGCAc < 6:368134/138‑1 (MQ=255) cgcgtgcAGTACACTTCACCACGGCCCCCGCCTTATAAAAATTCACTGGCCTGCCAATCATCGTAGGAACGCGTACCACTTGCATTGAATCTGCTTCTTGTTAAAGTAGGCAAAAATTAAATTTTGACGACAATAGCAc < 4:55970/133‑1 (MQ=255) cGCTTTCATTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTCAAAATCAAATTATTAAAGCTTTAAACTTTCAATTAATCTTCTTATTTTGAAAGTATGAAAAAATTAAATTTTCACGACAATAGCAc < 1:86234/139‑1 (MQ=255) cGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCAc < 7:226038/139‑1 (MQ=255) cGCTTTCAGTAAACTTCAACACTGACCCCTCCTAATAAAAATTACCTTTCCTGAAAATAATAGTATGAAAGCGTTAAACTTTCAATTAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCAc < 4:162222/139‑1 (MQ=255) cGCTTTCAGTAAACTTCAACACTGACCCCTCATTATAAAAATTACCTTTCCTGACAATCATAGTATCAACGCGTAAAACTATCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAATTTTTCACGACAATAGCAc < 5:230509/139‑1 (MQ=255) gCTTTCAGAAAACTTCAACACTGACCCCTCATTATAAAAATTACCTTTCCTGACAATCATAGTTTTAAAGCGTTAAACTTTAAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACt < 7:298654/139‑1 (MQ=255) cTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCAc > 7:145581/1‑137 (MQ=255) cTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACATTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCAc > 2:81250/1‑137 (MQ=255) aaCTACAACCCTGACCCCACCTTATAAAAATTACCTTACCTGACAAACATAGTATGACAGGGTAAAACTTTCAATGAATCTTCTGCTTTTGAATGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTaaa < 1:73615/137‑1 (MQ=255) aaCACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACTACAATAGCACTAGACTAAAGGAGGtt > 5:125675/1‑138 (MQ=255) aaCACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGtt > 5:97490/1‑138 (MQ=255) aaCACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGAAGACAATAGCACTAGACTAAAGGAGGtt > 1:141987/1‑138 (MQ=255) aCCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGAt > 8:50776/1‑139 (MQ=255) aCCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGAt > 2:397291/1‑139 (MQ=255) aCCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGAt > 1:166876/1‑139 (MQ=255) aCCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGAt > 3:333079/1‑139 (MQ=255) aCCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGAt > 8:250523/1‑139 (MQ=255) aCCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGAt > 3:179018/1‑139 (MQ=255) aCCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGAATGCAAAAATTAAATTTTGACTACAATAGCACTAGACTAAAGGAGGTTAAACGGAt > 1:393255/1‑139 (MQ=255) tcctTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACa > 2:50611/1‑138 (MQ=255) ataAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAAt > 4:310428/1‑138 (MQ=255) aaTTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCAc < 5:298929/100‑1 (MQ=255) aTTACCTTTCCTGACAATCATAGTATGAAATCTTTAAACTTTCAATTAATCTTATTATTTTTAAATTATGAAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGAt < 2:74287/139‑1 (MQ=255) acttttCCTCACAATATTATTTTTAAAGCTTTAATATTTAAATGATTCTTTTTATTTTCAAATTTTCAAAAATTTAATTTTTCACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCt < 6:265688/135‑1 (MQ=255) ccTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCtga > 7:360408/1‑139 (MQ=255) ccTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAATGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCtgatga > 7:358783/1‑137 (MQ=255) ccTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCtgatga > 7:156509/1‑137 (MQ=255) aaaaaaatatTATCAATGCTTAAAAATTTAAATTAATTTTATTTTTTTTAAATTATTAAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGc < 5:54760/131‑1 (MQ=255) cacATAGTATCAAAGCGTTAAACTTTCAATTAATCTTATTCTTTTTAAAGTATCAAAAAATAAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACt < 3:2402/137‑1 (MQ=255) aTCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACt < 3:310428/139‑1 (MQ=255) aTAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTATTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTg < 1:50611/138‑1 (MQ=255) atcaaaGCGTAAAACTTTCAATTAATATTATTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAata < 4:91102/135‑1 (MQ=255) aTGAAAGAGTTAAAATTTCAATCAATCTTCTTCTTTTTAAAGTATCAAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAata < 8:176124/138‑1 (MQ=255) aaaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTg > 6:423215/1‑138 (MQ=255) atgCGTTAATATTTAATTTAATCTTATTTTTTTTAATTTTTGAAAATATAAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 2:141987/137‑1 (MQ=255) aggCGTTAAACTTTAAATTAATATTATTTTTTTTAAAGTATGAAAAAATTATATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 4:146548/137‑1 (MQ=255) acttgTTAAACTTTCAATGAATATTCTTCTTTTTAAAGTATGCAATAATTAAATTTTCACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 7:395464/135‑1 (MQ=255) acgctttAAAGTTACAATCAACATTCTTCTTTTTAAAGAATCAAAAAATAAATTTTTGACGACAATAGCACTATACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 7:391487/134‑1 (MQ=255) acgCGTTAAAGTTTCAATGAATCTTCTTCTTTTCAAATTATCCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 1:13980/137‑1 (MQ=255) aatcGTTAAACTTTAAATGAATTTTATTTTTTTCAAAGTATCAAAAATTTAAATTTTGACGACAATAGCACTAGACTAACGTAGGTTAAACGGATGACAAAAATAAAATATCTGATGACAGCCGACTTGCAATATTGCa < 6:208471/136‑1 (MQ=255) aaggtttAAACTTTCATTTAATATTTTTATTTTTAAATTATTAAAAAATAAATTTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 8:156509/134‑1 (MQ=255) aacctttAAACTTTCAATCAATCTTATTCTTTTGAAAGTATCCAAAAATAAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAACAGATCTGATGACAGCCGACTTGCAATATTGCa < 7:43062/134‑1 (MQ=255) aaGGGTTAAATTTTCATTGATTCTTATTCTTTTGAAAGTATCCAAAAATTAAATTTTCACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 8:375429/139‑1 (MQ=255) aaGCTTTAAACTTTCAATTATTCTTCTTCTTTTTAAATTATGAAAAAATAAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 6:245725/139‑1 (MQ=255) aaGCTTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 4:396603/139‑1 (MQ=255) aaGCTTTAAACTTTCAATCAATATTCTTCTTTTTAAATTTTCAAAAAATTAAATTTTCACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 3:245397/139‑1 (MQ=255) aaGCGTTAAACTTTCAATTAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 5:198102/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTTAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 1:100569/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAATTATCAAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 6:70728/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 3:389413/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 1:51535/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 5:423215/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 7:250523/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 7:50776/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 8:145581/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 4:333079/139‑1 (MQ=255) aaGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATCCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGc < 3:108199/138‑1 (MQ=255) aaGCGTTAAACTTTCAATGAAACTTCTTCTTTTCAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 7:26080/139‑1 (MQ=255) aaGCGTTAAACTTTAAATTAATCTTCTTATTTTTAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 6:97490/139‑1 (MQ=255) aaGCGTTAAAATTTCAATTAATCTTATTCTTTTTAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 3:71407/139‑1 (MQ=255) aaGCGTTAAAATTTAAATTAATCTTCTTCTTTTGAAATTATGAAAAAATTAAATTTTCACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCa < 6:125675/139‑1 (MQ=255) gtttCAATTAATCTTCTTCTTTTGAAAGTATCAAAAATTTATATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTATTAGa < 4:200532/138‑1 (MQ=255) atttCAATGATTCTTCTTCTTTTGAATGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGTAGCTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTATTAGa < 6:201090/138‑1 (MQ=255) tttCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTATTAGAt < 1:81250/139‑1 (MQ=255) tCAATTATTCTTATTGTTTTTAATTTATTCAATTAATAATTTTTCACGACAATAGCACTAGACTTAATTAGTTTAAACTGATCACAAAAATAATAGATTTGTTGACAGCCGACTTGCAATATTGCTCTGTATTAGATa < 6:340506/138‑1 (MQ=255) tCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTATTAGAtct > 3:146548/1‑137 (MQ=255) | TCCATTAAGTCGTCTAGCCAGCTGAGCTCAGCCTTAACCCCTTCAAGTCCGCTTTCAGTAAACTTCAACACTGACCCCTCCTTATAAAAATTACCTTTCCTGACAATCATAGTATGAAAGCGTTAAACTTTCAATGAATCTTCTTCTTTTGAAAGTATGCAAAAATTAAATTTTGACGACAATAGCACTAGACTAAAGGAGGTTAAACGGATGACAAAAATAAAAGATCTGATGACAGCCGACTTGCAATATTGCACGGTATTAGATAA > BS168_reference_genome/1565639‑1565907 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |