| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BS168_reference_genome | 1,748,623 | T→C | 5.6% | S86P (TCC→CCC) | dapA → | 4‑hydroxy‑tetrahydrodipicolinate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 1,748,623 | 0 | T | C | 5.6% | 223.2 / 2.6 | 72 | S86P (TCC→CCC) | dapA | 4‑hydroxy‑tetrahydrodipicolinate synthase |
| Reads supporting (aligned to +/- strand): ref base T (26/41); new base C (2/2); total (29/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.44e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TAGTAGCGGGAACAACTGGAGAATCTCCGACCCTTTCAACTGAAGAAAAAATTGCGCTTTTTGAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTATTACAATAAACCTTCTCAAGAAGGAATGTACCAGCATTTTAAAGCAATTGCGGCAGAGACATCTCTTCCGGTT > BS168_reference_genome/1748489‑1748760 | tagtagCGGGAACAACTGGAGAATCTCCGACCCTTTCAACTGAAGAAAAAATTGCGCTTTTTGAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCACCAACACGAAAGATTCCAt > 4:87427/1‑139 (MQ=255) agtagCGGGAACAACTGGAGAATCTCCGACCCTTTCAACTGAAGAAAAAATTGCGCTAATTGAATAAACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTAGCGCTGGTACTGGGAGCAACAACACGAAAGATTCCAt > 1:424098/1‑138 (MQ=255) gtagCGGTAACAACTGGAGAATCTCCGACCCTTTCAACTGAAGAAAAAATTGCGCTTTTTGAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCAtt < 7:404845/138‑1 (MQ=255) tagCGGGAACAACTGGAGAATCTCCGACCCTTTCAACTGAAGAAAAAATTGCGCTTTTTGAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGTTGGTACTGGGAGCAACAACACGAAAGATTCCAtt > 1:216569/1‑137 (MQ=255) gCGGGAACAACTGGAGAATCTCCGACCCTTTCAACTGAAGAAAAAATTGCGCTTTTTGAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGc > 1:125182/1‑139 (MQ=255) gCGGGAACAACTGGAGAATCTCCGACCCTTTCAACTGAAGAAAAAATTGCGCTTTTTGAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGc > 3:114581/1‑139 (MQ=255) gCGGGAACAACTGGAGAATCTCCGACCCTTTCAACTGAAGAAAAAATTGCGCTTTTTGAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGc > 7:305520/1‑139 (MQ=255) gCGGGAACAACTGGAGAATCTCCGACCCTTTCAACTGAAGAAAAAATTGCGCTTTTTGAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATCCCATTAAGc > 7:137028/1‑139 (MQ=255) gCGGGAACAACTGGAGAATCTCCGACCCTTTCAACTGAAGAAAAAATTGCGCTTTATGAATATACGCTAAAAGAAGTAAACGGACGCGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATACCATTAAGc > 1:98307/1‑139 (MQ=255) aacaacTGGAGAATCTCCGACCCTTTCAACTGAAGAAAAAATTGCGCTTTTTGAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGCGCAACAACCCGAAAGATTCCATAAAGCTGAc > 5:366513/1‑138 (MQ=255) caacTGGAGAATCTCCGACCCTTTCAACTGAAGAAAAAATTGCGCTTTTTGAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACaaa < 7:57029/139‑1 (MQ=255) cattatcCCACCTTTACAAATCAATAAAAAATTGCGTTTTTTTAATATACTTTAAAATACTAAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCt < 3:238771/133‑1 (MQ=255) aaTCACCGACCCTACCAACTCAATAAAAAATTGCGCTTTTTGAATATCCGGTAAAACAAGTACACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGa < 4:188815/139‑1 (MQ=255) ccGACCCTTTCAACTGAAGAAAAAATTGCGCTTTTTGAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAg > 6:408885/1‑139 (MQ=255) cGACCCTTTCAACTGAAGAAAAAATTGCGCTTTTTGAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAg < 8:305520/138‑1 (MQ=255) ttCAACTGAAGAAAAAATTGCGCTTTTTGAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACTAAAGATTCCATTAAGCTGACAAAAAAAGGTGAGGACGCGGGCggg > 8:383427/1‑137 (MQ=255) ttCAACTGAAGAAAAAATTGCGCTTTTTGAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTg > 1:236739/1‑139 (MQ=255) tCAACTGAAGAAAAAATTGCGCTTTTTGAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAg > 1:313514/1‑121 (MQ=255) tCAACTGAAGAAAAAATTGCGCTTTTTGAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAg < 2:313514/121‑1 (MQ=255) cAACTTAAGAAAAAATTGCGCTTTTTGAATATACGGAAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGa < 5:349152/139‑1 (MQ=255) cAACTGAAGAAAAAATTGCGCTTTTTTAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGa < 2:264659/139‑1 (MQ=255) aaatGAATAAAAAATTGAGCTTTTTGAATATACGGTAAAATAAGTAAACGGACGGGTGCCCGATATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGa < 7:199768/135‑1 (MQ=255) aaCTTAATAAAAAATTGCGCTTTTTTAATAAACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGa < 2:125182/138‑1 (MQ=255) aaCTTAAGAAAAAATTGCGCTTTTTGAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGa < 8:248957/138‑1 (MQ=255) aaCTGAAGAAAAAATTGCGCTTTTTGAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGa < 4:114581/138‑1 (MQ=255) aaCTGAAGAAAAAATTGCGCTTTTTGAAAATCCGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGa < 4:397873/138‑1 (MQ=255) aaCTGAAGAAAAAAATGCCGTTTTTTAATATCCGGTAAAAGACGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGa < 7:383427/138‑1 (MQ=255) aCTGAAGAAAAAATTGCGCTTTTTTAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACg < 8:274007/139‑1 (MQ=255) aCTGAAGAAAAAATTGCGCTTTTTGAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACg < 7:22376/139‑1 (MQ=255) agaagaaAAAATTGAGCTTTTTGAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCt > 5:213368/2‑139 (MQ=255) gaagaaAAAATTGCGCTTTTTGAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTg > 8:252018/1‑139 (MQ=255) ttGCGCTTTTTGAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGt < 7:399428/139‑1 (MQ=255) gcTTTTTTAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTAcc < 3:121736/139‑1 (MQ=255) gcTTTTTGAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTAcc < 6:388914/139‑1 (MQ=255) gcTTTTTGAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTAcc < 8:320175/139‑1 (MQ=255) gcTTTTTGAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTAcc < 6:74824/139‑1 (MQ=255) gcTTTTTGAAACTCCGGAAAACGACTACAACGGACGGGTGCCCGTAATCGCTGGTACGGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTAcc < 2:179274/139‑1 (MQ=255) ccTTTTTGTATAAAAGGTAAACCAATTAACCGGAAGGGGGCCCCGTAAAGCTTGTACATGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTAcc < 3:305579/138‑1 (MQ=255) tGAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTa < 2:236739/138‑1 (MQ=255) tGAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTa < 5:408885/138‑1 (MQ=255) tGAATACACGCTAAAAGAACTAAACGGACGGCTGCACGTTATAGCTGGTACTGGGAGCAACAACACGAAAGAATCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTa < 5:253443/138‑1 (MQ=255) taaTATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTAt < 2:267992/137‑1 (MQ=255) gAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTAt < 6:323141/138‑1 (MQ=255) gAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTAt < 7:252018/138‑1 (MQ=255) cGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTATTACAATa < 3:162119/138‑1 (MQ=255) tAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTa > 5:164564/1‑127 (MQ=255) tAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTa < 6:164564/127‑1 (MQ=255) gTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGtt < 6:426092/102‑1 (MQ=255) gTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGtt > 5:426092/1‑102 (MQ=255) gTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTATTACAATAAACCTtctc > 8:50374/1‑136 (MQ=255) gTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTATTACAATAAACCTtctc > 1:278326/1‑136 (MQ=255) tAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTATTACAATAAACCTTCTCaag > 2:400897/1‑138 (MQ=255) aaaCGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGc > 8:323644/1‑96 (MQ=255) aaaCGGACGGGTGCCAGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGc < 7:323644/96‑1 (MQ=255) accggacggGAGCCCGTTATCGCTGGGACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTATTACAATAAACCTTCTCaaga < 5:114629/135‑1 (MQ=255) acggGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGGTGGTTTTCTTGTTACCCCGTATTTCCATAAACCTTCTCGAGAAGGAATg > 1:225966/1‑139 (MQ=255) acggGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGGTTTTTTCCCCGTATTACAATAAACCTTCTCaagcagtctct > 4:1548/1‑134 (MQ=255) gCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTATTACAATAAACCTTCTCAAGAAGGAATGTACCAg < 8:275908/139‑1 (MQ=255) cccGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTATTACAATAAACCTTCTCAAGAAGGAATGTACCAg < 1:107760/138‑1 (MQ=255) cGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATCCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTAt < 1:314434/87‑1 (MQ=255) cGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATCCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTAt > 2:314434/1‑87 (MQ=255) gTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTATTAAAATAAACCTTCTCAAGAAGGAAAGTACCAGCAATTTAAAGCAAt > 7:360810/1‑139 (MQ=255) gggAGCAACAACACGAAAGATTACATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGCCGGGTTTATGCTTGTTACACCGTATTACAAAAAAACTTCTCAAGTATGAATGTACCAGCATTTTAAAGCAAATTCgg > 4:4446/1‑139 (MQ=255) caacaaCCCGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTATTACAATAAACCTTCTCAAGAAGGAATGTACCAGCATTTTAAAGCAATTGCGGCagag > 3:344984/1‑139 (MQ=255) aacaacACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTATTACAATAAACCTTCTCAAGAAGGAATGTACCAGCATTTTAAAGCAATTGCGGCAgaga > 5:101107/1‑139 (MQ=255) aacaacACGAAAGATTACATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTATTACAATAAACCTTCTCAAGAAGGAATGTACCAGCATTTTAAAGCAATTGCGGCAgaga > 7:247801/1‑139 (MQ=255) acaacaCGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTATTACAATAAACCTTCTCAAGAAGGAATGTACCAGCATTTTAAAGCAATTGCGGCAGAGAc < 1:400897/139‑1 (MQ=255) acaacaCGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTATTACAATAAACCTTCTCAAGAAGGAATGTACCAGCATTTTAAAGCAATTGCGGCAGAGAc < 3:87427/139‑1 (MQ=255) aacaCGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTATTACAATAAACCTTCTCAAGAAGGAATGTACCAGCATTTTAAAGCAATTGCGGCAGAGACAt < 2:74261/139‑1 (MQ=255) aaaGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTATTACAATAAACCTTCTCAAGAAGGAATGTACCAGCATTTTAAAGCAATTGCGGCAGAGACATCTCTTc < 1:28866/139‑1 (MQ=255) aaaGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTATTACAATAAACCTTCTCAAGAAGGAATGTACCAGCATTTTAAAGCAATTGCGGCAGAGACATCTCTTc < 8:29479/139‑1 (MQ=255) aaaGATCCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTATTACAATAAACCTTCTCAAGAAGGAATGTACCAGCATTTTAAAGCAATTGCGGCAGAGACATCTCTTc < 8:137028/139‑1 (MQ=255) ttCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTATTAGATTAAACCTTGTCAAGAAGGAATGTACCAGCATTTTAAAGCAATTGCGGCAGAGACATCTCTTCCGGtt < 6:213368/139‑1 (MQ=255) ttCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTATTACAATAAACCTTCTCAAGAAGGAATGTACCAGCATTTTAAAGCAATTGCGGCAGAGACATCTCTTCCGGtt < 2:278326/139‑1 (MQ=255) tCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTATTACAATAAACCTTCTCAAGAAGGAATGTACCAGCATTTTAAAGCAATTGCGGCAGAGAc > 2:262768/1‑125 (MQ=255) tCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTATTACAATAAACCTTCTCAAGAAGGAATGTACCAGCATTTTAAAGCAATTGCGGCAGAGAc < 1:262768/125‑1 (MQ=255) | TAGTAGCGGGAACAACTGGAGAATCTCCGACCCTTTCAACTGAAGAAAAAATTGCGCTTTTTGAATATACGGTAAAAGAAGTAAACGGACGGGTGCCCGTTATCGCTGGTACTGGGAGCAACAACACGAAAGATTCCATTAAGCTGACAAAAAAAGCTGAGGAAGCGGGCGTGGACGCTGTTATGCTTGTTACCCCGTATTACAATAAACCTTCTCAAGAAGGAATGTACCAGCATTTTAAAGCAATTGCGGCAGAGACATCTCTTCCGGTT > BS168_reference_genome/1748489‑1748760 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |