| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BS168_reference_genome | 2,063,773 | T→A | 100% | pseudogene (391/654 nt) | yobHc ← | fragment of putative DNA phage repair protein; putative defective prophage 6 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 2,063,773 | 0 | T | A | 100.0% | 291.5 / ‑6.6 | 85 | pseudogene (391/654 nt) | yobHc | fragment of putative DNA phage repair protein; putative defective prophage 6 |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (48/36); minor base C (1/0); total (49/36) | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
TATCCAATTCCTAGACTTATTGTTCGACCAACTTTATTATATGTACGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACTCTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAGCATGATAGTACAACTGGTTTCCCATTATTCCGAACTTCTTTTCAAGCAGCTCTAAAGGAAATT > BS168_reference_genome/2063640‑2063901 | tATCCAATTCCTAGACTTATTGTTCGACCAACTTTATTATATGTACGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTAc < 1:126311/139‑1 (MQ=255)tATCCAATTCCTAGACTTATTGTTCGACCAACTTTATTATATGTACGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTAc < 7:301902/139‑1 (MQ=255)tATCCAATTCCTAGACTTATTGTTCGACCAACTTTATTATATGTACGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTAc < 7:157743/139‑1 (MQ=255)tATCCAATTCCTAGACTTATTGTTCGACCAACTTTATTATATGTACGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTAc < 3:52275/139‑1 (MQ=255) tCCAATTCCTAGACTTATTGTTCGCCCAACTTTATTATATGTACGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAAACTGACACTTAcc > 1:216417/1‑138 (MQ=255) tCCAATTCCTAGACTTATTGTTCGACCAACTTTATTATATGTACGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTAcc > 2:87616/1‑138 (MQ=255) tCCAATTCCTAGACTTATTGTTCGACCAACTTTATTATATGTACGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTAcc > 3:340841/1‑138 (MQ=255) tCCAATTCCTAGACTTATTGTTCGACCAACTTTATTATATGTACGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTAcc > 6:408255/1‑138 (MQ=255) tCCAATTCCTAGACTTATTGTTCGACCAACTTTATTATATGTACGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTAcc < 1:64760/138‑1 (MQ=255) tCCAATTCCTAGACTTATTGTTCGACCAACTTTATTATATGTACGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCa < 7:59498/139‑1 (MQ=255) aaTTCCTAGACTTATTGTTCGACCAACTTTATTATATGTACGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCaaaa < 6:301755/139‑1 (MQ=255) ttCCTAGACTTATTGTTCGACCAACTTTATTATATGTACGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAAc > 2:1111/1‑138 (MQ=255) tCCTAGACTTATTGTTCGACCAACTTTATTATATGTACGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTAc > 2:10013/1‑131 (MQ=255) tCCTAGACTTATTGTTCGACCAACTTTATTATATGTACGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTAc < 1:10013/131‑1 (MQ=255) cTAGACTTATTGTTCGACCAACTTTATTATATGTACGTGCCCTTCTTGCGACTTCCTCACAACTCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGCCCCTTACCACAACGAAt > 8:304764/1‑139 (MQ=21) gACTTATTGTTCGACCAACTTTATTATATGTACGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATc < 4:340841/137‑1 (MQ=255) gACTTATTGTTCGACCAACTTTATTATATGTACGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTg > 6:147230/1‑139 (MQ=255) aTTGTTCGACCAACTTTATTATATGTACGTGCCCTTCTTGCGCCTTCCTCACAAATCTCCAAGCGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCt > 6:339768/1‑139 (MQ=255) aTTGTTCGACCAACTTTATTATATGTACGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCt > 3:362931/1‑139 (MQ=255) aTTGTTCGACCAACTTTATTATATGTACGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCt > 1:106717/1‑139 (MQ=255) aTTGTTCGACCAACTTTATTATATGTAAGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGATCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCACt > 3:211745/1‑139 (MQ=255) aCCAACTTTATTATATGTACGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAAt > 5:70461/1‑139 (MQ=255) aaCTTTATTATATGTACGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGa < 6:335305/139‑1 (MQ=255) tatGTACGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTAc > 4:322786/1‑100 (MQ=255) tatGTACGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTAc < 3:322786/100‑1 (MQ=255) tGTACGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTAttt > 5:324280/1‑137 (MQ=255) tGTACGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTAttt > 1:417545/1‑137 (MQ=255) tGTACGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGATCCTAttt > 2:170339/1‑137 (MQ=255) gTACGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGcccc > 2:301522/1‑114 (MQ=255) gTACGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGcccc < 1:301522/114‑1 (MQ=255) tACGTGGCCTTCTTGCGAATTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACGATAACTAATCTGCCCCTGAATCAATGGAGCTCCTATTTCAGa < 4:363346/139‑1 (MQ=255) cccTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCaaaa > 8:53004/1‑95 (MQ=255) cccTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCaaaa < 7:53004/95‑1 (MQ=255) cccTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATgg > 5:31556/1‑118 (MQ=255) cccTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATgg < 6:31556/118‑1 (MQ=255) cttcttGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCaa < 1:1111/139‑1 (MQ=255) tcttGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAAtt > 3:394268/1‑139 (MQ=255) cttGCGACTTCCTCACAAATCTCCAAGAGCTCAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAACCTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTc > 3:427491/1‑139 (MQ=255) cttGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTc > 2:399633/1‑139 (MQ=255) gCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTcc < 5:408255/137‑1 (MQ=255) gCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTcc < 1:87616/137‑1 (MQ=255) cGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGt < 4:394268/138‑1 (MQ=255) cGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTCCAGATAAATCAATTCCGTg < 1:49045/139‑1 (MQ=255) aCTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAg < 1:399633/139‑1 (MQ=255) aCTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACAAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTACGTGAg > 3:276479/1‑139 (MQ=255) ttCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCGCTTTGTATAATCCCTAAACAAAATCTGCCACTTACAAAAACTAATCTGCACCGGCATCAATGGAGCTCATATTTCAGATAAATCAATTCCGTGAGc > 6:277368/1‑138 (MQ=25) ccTCACAAATCTCCAAGATCACAGCTTTAATCTCATCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACGAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAGCAt < 4:211745/138‑1 (MQ=255) ccTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAGCAt < 2:417545/138‑1 (MQ=255) cTCACAAATCTCCAAGCCCACAGCTTTAATCTCTTCTCTCTTAGTATACTCCCTACACAAACTCTGACACTTCCCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCACTTCCGTGAGCATGa < 8:381432/139‑1 (MQ=255) cTCACAAATCTCCAAGAGCACAGCTTTAATCTATTCTCTCTTTGTATAATCCCTAAACAAAATCTTAAACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAGCATGa < 4:218260/139‑1 (MQ=255) acaAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAGCATGAt < 2:106717/137‑1 (MQ=255) tcCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAg < 1:287317/124‑1 (MQ=255) tcCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAg > 2:287317/1‑124 (MQ=255) tcCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAGCATGATAGTACAACt > 6:129890/1‑139 (MQ=255) tcCAAGACCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCATGCATCAATGGAGCTCATATTTAAGATAAATCAATTCCGTGAGCATGATAGTACAACt > 3:204121/1‑139 (MQ=21) aaGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAGCATGATAGTACAACTGGt > 8:294933/1‑139 (MQ=255) agagCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAGCATGATAGTACAACTGGtt < 4:362931/139‑1 (MQ=255) cacaGCTTTAATCTCTTCTCACTTTGTATAATCCCTAAACAAAAACTGACACTTACCAAAACTAATCTGCCCCTGCATCAAAGGAGCTCCTATTTAAGAAAAATCAAATCCGTGAGCATGATAGTACAACTGGTTTcc > 2:311839/1‑138 (MQ=255) tcttctctCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAGCATGATAGTACAACTGGTTTCCCATTATTCCg > 4:365795/1‑135 (MQ=255) tcttctctCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAGCATGATAGTACAACTGGTTTCCCATTATTCCg < 3:365795/135‑1 (MQ=255) ttctctCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTcc < 4:25024/96‑1 (MQ=255) ttctctCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTcc > 3:25024/1‑96 (MQ=255) ttctctCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAGCATGATAGTACAACTGGTTTCCCATTATTCCGAActtc > 1:266499/1‑139 (MQ=255) ttctctCTTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAGCATGATAGTACAACTGGTTTCCCATTATTCCGAActtc > 7:131616/1‑139 (MQ=255) tctTTGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAGCATGATAGTACAACTGGTTTCCCATTATTCCGAACTTCtttt > 8:352938/1‑138 (MQ=255) tGTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAGCATGATAGTACAACTGGTTTCCCATTATTCCGAACTTCTTTTCAag < 5:339768/138‑1 (MQ=255) gTATAATCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAGCAAGATAGTACAACTGGTTTCCCATTATTCCGAACTTCTTTTCAag > 1:61885/1‑137 (MQ=255) aTCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAg < 2:393626/86‑1 (MQ=255) aTCCCTAAACAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAg > 1:393626/1‑86 (MQ=255) aaaCAAAATCTGACACTTACCAACACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAGCATGATAGTCCAACTGGTTTCGCATTATTCCGACCTTCTTTTCAAGCAGCTCTAAAgg > 2:416468/1‑138 (MQ=17) aaaCAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTAtt > 4:152526/1‑58 (MQ=255) aaaCAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTAtt < 3:152526/58‑1 (MQ=255) aaaCAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGa < 8:288616/63‑1 (MQ=255) aaaCAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGa > 7:288616/1‑63 (MQ=255) aaaCAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTcc < 2:262477/75‑1 (MQ=255) aaaCAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTcc > 1:262477/1‑75 (MQ=255) aaaCAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAGCATGATAGTACAACTGGTTTCCCATTATTCCGACCTTCTTTTCAAGCAGCTCTAAAgg > 4:164464/1‑138 (MQ=255) aaaCAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAGCATGATAGTACAACTGGTTTCCCATTATTCCGAACTTCTTTTCAAGCAGCTCTAAAgg > 8:194837/1‑138 (MQ=255) aaaCAAAATCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAGCATGATAGTACAACTGGTTTCCCATTATTCCGAACTTCTTTTCAAGCAGCTCTAAAgg > 8:383092/1‑138 (MQ=255) aaaCAAAATATGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTACGTGAGCATGATAGTACAACTGGTTTCCCATTATTCCGAACTTCTTTTCAAGCAGCTCTAAAgg > 7:290879/1‑138 (MQ=255) aaTCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAGCAt < 1:354680/77‑1 (MQ=255) aaTCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAGCAt > 2:354680/1‑77 (MQ=255) aaTCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAGCATGATAGTACAACTGGTTTCCCATTATTCCGAACTTCTTTTCAAGCAGCTCTAAAGGAAAtt > 7:244301/1‑137 (MQ=255) aaTCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAGCATGATAGTACAACTGGTTTCCCATTATTCCGAACTTCTTTTCAAGCAGCTCTAAAGGAAAtt > 6:107553/1‑137 (MQ=255) aaTCTGACACTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAGCATGATAGTACAACTGGTTTCCCATTATTCCGAACTTCTTTTCAAGCAGCTCTAAAGGAAAtt > 5:392854/1‑137 (MQ=255) | TATCCAATTCCTAGACTTATTGTTCGACCAACTTTATTATATGTACGTGCCCTTCTTGCGACTTCCTCACAAATCTCCAAGAGCACAGCTTTAATCTCTTCTCTCTTTGTATAATCCCTAAACAAAATCTGACTCTTACCAAAACTAATCTGCCCCTGCATCAATGGAGCTCCTATTTCAGATAAATCAATTCCGTGAGCATGATAGTACAACTGGTTTCCCATTATTCCGAACTTCTTTTCAAGCAGCTCTAAAGGAAATT > BS168_reference_genome/2063640‑2063901 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |