| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BS168_reference_genome | 2,366,410 | C→A | 6.0% | M403I (ATG→ATT) | ypiA ← | conserved protein of unknown function |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 2,366,410 | 0 | C | A | 6.0% | 321.7 / 4.1 | 109 | M403I (ATG→ATT) | ypiA | conserved protein of unknown function |
| Reads supporting (aligned to +/- strand): ref base C (64/37); new base A (3/4); total (67/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.23e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 | |||||||||||
Only 100 of 109 total aligned reads displayed.
CATGTAATTCCCTCCTCTATCGTTCGTATAATCTATATACTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCT > BS168_reference_genome/2366273‑2366545 | cATGTAATTCCCTCCTCTATCGTTCGTATAATCTATATACTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTACa < 8:269910/139‑1 (MQ=255) gTAATTCCCTCCTCTATCGTTCGTATAATCTATATACTTATATGTTCCACATGAATGGTTAATATTCCTGATTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTGTCTTCAAGCTCTTCATTTGCTCCGTCCAtt > 4:228038/1‑138 (MQ=255) tCCCTCCTCTATCGTTCGTATAATCTATATACTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAg > 8:156396/1‑138 (MQ=255) cctcctCTATCGTTCGTATAATCTATATACTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAAc > 6:124154/1‑139 (MQ=255) tcctcTATCGTTCGTATAATCTATATACTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCTCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAAACt > 5:273981/1‑139 (MQ=255) tcctcTATCGTTCGTATAATCTATATACTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCaa > 7:231218/1‑133 (MQ=255) tcctcTATCGTTCGTATAATCTATATACTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCaa < 8:231218/133‑1 (MQ=255) tcctcTATCGTTCGTATAATCTATATACTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCt > 5:82842/1‑139 (MQ=255) ctctATCGTTCGTATAATCTATATACTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCttt > 4:18130/1‑139 (MQ=255) ctctATCGTTCGTATAATCTATATACTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCttt > 5:110702/1‑139 (MQ=255) tcgttcgtATAATCTATATAATTAAATGTTACACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATACGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATATCAAGAACCTTTTTCa > 5:379047/1‑138 (MQ=255) ttcgtATAATCTATATACTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAg > 3:185403/1‑139 (MQ=255) ttcgtATAATCTATATACTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAg > 3:124137/1‑139 (MQ=255) cgtATAATCTATATACTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCg > 5:128668/1‑139 (MQ=255) cgtATAATCTATATACTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCg > 8:119428/1‑139 (MQ=255) tatataCTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGctt > 7:367447/1‑139 (MQ=255) tataCTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGcttct > 1:266498/1‑139 (MQ=255) tataCTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGcttct > 4:363985/1‑139 (MQ=255) tataCTTATATGTTCCACATGAATGGTGAACATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTCTCTTCCAGCTCTTCATTGGCCCCGTCAATTTCAAGAACCTTTTTCAAAAGCGGAAGCGcttct > 6:106698/1‑139 (MQ=255) ataCTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCaa > 2:360027/1‑109 (MQ=255) ataCTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCaa < 1:360027/109‑1 (MQ=255) tataTGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTg > 4:260708/1‑138 (MQ=255) atatGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTTGCTCCGTCCATTTAAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTTaa > 5:16694/1‑139 (MQ=255) atatGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCTTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCattttta > 2:198788/1‑136 (MQ=255) atatGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTg > 1:78623/1‑137 (MQ=255) atatGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTg > 8:297818/1‑137 (MQ=255) atatGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTg > 6:103516/1‑137 (MQ=255) atatGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGaa > 3:379266/1‑139 (MQ=255) atatGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGaa > 6:388352/1‑139 (MQ=255) atatGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTAGAAAGCGGCAGCGCTTATTTTTgt > 3:266612/1‑137 (MQ=255) atatGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCATCGATTCGCAAAATCTTTTCTTCAAGCTCTTCATTTGCTCCGTCCATTTCAAGAACCTTTTTCAAAATCGGCAGCGCTTATTTTTGa > 5:97840/1‑138 (MQ=255) tatGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTg > 3:410314/1‑136 (MQ=255) tatGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTg > 2:323328/1‑136 (MQ=255) tatGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTg > 5:192412/1‑136 (MQ=255) tatGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTg > 5:198806/1‑136 (MQ=255) tatGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCGTTTTg > 2:246817/1‑136 (MQ=255) tGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCTTCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGATCCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAATAc > 5:91666/1‑139 (MQ=255) tGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGACCCTTTTTCAAAAGCGGCAGCGCTTGATTTTgctgac > 2:214273/1‑134 (MQ=255) tGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGAc > 4:309137/1‑139 (MQ=255) tGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGAc > 2:65758/1‑139 (MQ=255) gTTCCACTTGAATGGTTAATATTCATGATTTTGTTTAAAATTAATCCTCTATTCTCAAACTCTTTTCTTCATGCTCTTCATTGGCTCCGTCTATTTCAATATCGTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGAc < 6:97840/138‑1 (MQ=255) ttCCACATGAATGTTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGAAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACct < 3:300746/139‑1 (MQ=255) ttCCACATGAATGGTGAACATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTCTCTTCCAGCTCTTCATTGGCCCCGTCAATTTCAAGAACCTTTTTCAAAAGCGGAAGCGCTTCTTTCTGCAGGcc < 5:106698/138‑1 (MQ=255) ttCCAAATGAATGGTTAATATTCCTGATTATCTATAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGAcc < 2:78623/138‑1 (MQ=255) tCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGCACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACctt > 6:327363/1‑139 (MQ=255) tCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACctt > 3:81094/1‑139 (MQ=255) cacaTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCTTTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGAcc < 7:32906/135‑1 (MQ=255) cacaTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACcttct > 8:182676/1‑139 (MQ=255) cacaTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACcttct > 4:373894/1‑139 (MQ=255) cacaTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAACAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGAcc > 8:32906/1‑135 (MQ=255) cacaTGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGACCATTTCAAGAACCTTATTCAAAAGCCGCAGCGCTTCTTTTTGAAGAActtct > 6:167384/1‑139 (MQ=255) acaTTATTGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAATAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACcttctt < 6:379047/139‑1 (MQ=255) tGGTAAATAATCGTTCTTATCTAGAAAAATCATCCGCGATTCGCAAAATCGTTTATTCAAGCTCTTCATTGGCTCCGCCCATTTAAAGAACCTTTTTCAAACGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAg < 2:423784/139‑1 (MQ=255) gTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAgg > 6:196150/1‑138 (MQ=255) gTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAgg > 4:307175/1‑138 (MQ=255) gTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCGTGTTTTTTAAGAGCGTGTTCTAATAGGa > 1:423784/1‑139 (MQ=255) cTGCTTATCTAGAAAATTCATCCTCTATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTa < 1:206706/139‑1 (MQ=255) cTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTa > 3:37917/1‑139 (MQ=255) cTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTa > 7:298889/1‑139 (MQ=255) cTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCGTGTTTTTTAAGACCTTGGTGTAATATGATGCTTGGGTa > 1:389253/1‑139 (MQ=255) tGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTAt > 3:387661/1‑139 (MQ=255) tGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTAt > 5:372976/1‑139 (MQ=255) tATCTAGAAAATTCATCCTCGATTCGCAAAATCGTCTCTTCCAGCTCTTCATTGGCCCCGTCAATTTCAAGAACCTTTTTCAAAAGCGGAAGCGCTTCTTTCTGCAGGCCTTCTTCTAATAAGAAGCTTGCGTATTcg > 3:210160/1‑137 (MQ=255) tCTAGAAAATTCATCCTCGCTTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGGCCATTTCAAGAACCTTTTTCAAAAGCGGCCGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCata < 1:214273/138‑1 (MQ=255) tCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCata > 7:137895/1‑138 (MQ=255) gAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAg < 8:298889/138‑1 (MQ=255) gAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGa < 5:106826/139‑1 (MQ=255) gAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGa < 3:363985/139‑1 (MQ=255) aTCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATctct < 1:261223/138‑1 (MQ=255) cTCGTTTCCAAAATTCGTTTATTCAAGCTGTTAATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTAtc < 7:155280/138‑1 (MQ=255) gtttCGCAAAATGGTTTCTTCAAGGTCTTAATTGGATCCTTCAATTTAAAGAACTTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTAtcctcc < 6:273981/137‑1 (MQ=255) gATTCTAAAATTCGTTTGTTGAAGATGTTCATTGGCGCCGTCAATTTGAAGAAGCTTTTTCAAAAGCGGCAGCTCTTCTTTTTGAAGAAATTCTTATAATAGTAAGATTGCGTATTCAAATAAGATATCTCTAtcctcc < 4:191616/139‑1 (MQ=255) gATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTAtcctcc < 6:71846/139‑1 (MQ=255) gATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTAtcct < 8:329056/137‑1 (MQ=255) ttCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCg < 1:327925/139‑1 (MQ=255) cAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTaa < 4:37917/139‑1 (MQ=255) cAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTaa < 7:16906/139‑1 (MQ=255) cttcAATCTCATCATTGGCTACGTCCATTTCAAGAACCTTTTTCGAAAGAGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGc < 4:266612/139‑1 (MQ=255) cttcAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAgg < 5:124154/138‑1 (MQ=255) cAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGc < 5:177039/136‑1 (MQ=255) cAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGc < 5:103516/136‑1 (MQ=255) cAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGc < 4:379266/136‑1 (MQ=255) aGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCt < 5:388352/139‑1 (MQ=255) ctctTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCa < 7:182676/139‑1 (MQ=255) ttCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATctct > 1:253116/1‑105 (MQ=255) ttCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATctct < 2:253116/105‑1 (MQ=255) tCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTACCGGTAATGAAGATAGTCAGCCTGAAAg > 8:228186/1‑138 (MQ=255) cATGGGCTCCGTCCATTACAAGAACCTTTTTCAAACGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGACGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGa < 4:10290/139‑1 (MQ=255) aTTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGa < 4:124137/138‑1 (MQ=255) aTTGGCTCCGTCCATTTCAAGAACATTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGAt < 6:82842/139‑1 (MQ=255) ggCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTa < 3:419149/81‑1 (MQ=255) ggCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTa > 4:419149/1‑81 (MQ=255) ccGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGa < 6:43252/88‑1 (MQ=255) ccGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGa > 5:43252/1‑88 (MQ=255) ccGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGCAAGCTTGCGTAATCATATAATAAATCTCTATCCTCCCTGTAATGAAGATAGGCAGCCTCAAATGATTGtttag > 5:396621/1‑137 (MQ=255) ccGTCAATTTCAAGAACCTTTTTCAAAAGCGGAAGCGCTTCTTTCTGCAGGCCTTCTTCTAATAAGAAGCTTGCGTATTCGTATAAGAAATCTCTGTCCTCCCGGTag < 7:335171/108‑2 (MQ=255) ccGTCAATTTCAAGAACCTTTTTCAAAAGCGGAAGCGCTTCTTTCTGCAGGCCTTCTTCTAATAAGAAGCTTGCGTATTCGTATAAGAAATCTCTGTCCTCCCGGTag > 8:335171/1‑107 (MQ=255) gTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCt < 3:18130/139‑1 (MQ=255) tCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTAtcctcc < 8:194886/99‑1 (MQ=255) tCCATTTAAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTAtcctcc > 7:194886/1‑99 (MQ=255) | CATGTAATTCCCTCCTCTATCGTTCGTATAATCTATATACTTATATGTTCCACATGAATGGTTAATATTCCTGCTTATCTAGAAAATTCATCCTCGATTCGCAAAATCGTTTCTTCAAGCTCTTCATTGGCTCCGTCCATTTCAAGAACCTTTTTCAAAAGCGGCAGCGCTTCTTTTTGAAGACCTTCTTCTAATAGGAAGCTTGCGTATTCATATAAGAAATCTCTATCCTCCCGGTAATGAAGATAGGCAGCCTCAAAGGATTGTTTTGCT > BS168_reference_genome/2366273‑2366545 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |