Predicted mutation
evidence seq id position mutation freq annotation gene description
RA BS168_reference_genome 2,541,998 C→T 5.4% N316N (AAC→AAT yqhQ → conserved protein of unknown function

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*BS168_reference_genome2,541,9980CT 5.4% 257.3 / 2.5 74N316N (AAC→AATyqhQconserved protein of unknown function
Reads supporting (aligned to +/- strand):  ref base C (29/41);  new base T (2/2);  total (31/43)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.06e-01

GGTACCCGGGACTTTGGCTTCAGCTGTTAACCACAAAGGAACCTAAGGATGAACAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTACAACCTATTATTGCTGTATTAATTGCGCTGGGAGCGTTCGGTTTCCTCTATGTGCTGGTAACCAATCCCGGAGA  >  BS168_reference_genome/2541862‑2542135
                                                                                                                                        |                                                                                                                                         
ggTACCCGGGACTTTGGCTTCAGCTGTTAACCACAAAGGAACCTAAGGATGAACAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCTGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGt                                                                                                                                         >  1:343558/1‑139 (MQ=255)
       gggACTTTGGCTTCAGCTGTTAACCACAAAGGAACCTAAGGATGAACAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTa                                                                                                                                   >  2:261488/1‑138 (MQ=255)
         gACTTTGGCTTCAGCTGTTAACCACAAAGGAACCTAAGGATGAACAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTaaaa                                                                                                                                >  2:62651/1‑139 (MQ=255)
              tGGCTTCAGCTGTTAACCACAAAGGAACCTAAGGATGAACAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCg                                                                                                                            <  5:123209/138‑1 (MQ=255)
              tGGCTTCAGCTGTTAACCACAAAGGAACCTAAGGATGAACAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCg                                                                                                                            <  3:392560/138‑1 (MQ=255)
              tGGCTTCAGCTGTTAACCACAAAGGAACCTAAGGATGAACAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGt                                                                                                                           >  6:177799/1‑139 (MQ=255)
                    cAGCTGTTAACCACAAAGGAACCTAAGGATGAACAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGcc                                                                                                                       <  5:284832/137‑1 (MQ=255)
                     aGCTGTTAACCACAAAGGAACCTAAGGATGAACAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCg                                                                                                                            >  4:345772/1‑131 (MQ=255)
                     aGCTGTTAACCACAAAGGAACCTAAGGATGAACAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCg                                                                                                                            <  3:345772/131‑1 (MQ=255)
                          ttAACCACAAAGGAACCTAAGGATGAACAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTAt                                                                                                                >  8:218036/1‑138 (MQ=255)
                          ttAACCACAAAGGAACCTAAGGATGAACAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTAt                                                                                                                >  2:35847/1‑138 (MQ=255)
                          ttAACCACAAAGGAACCTAAGGATGAACAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTAGCCCTGCTAt                                                                                                                >  3:293421/1‑138 (MQ=255)
                               cacaAAGGAACCTAAGGATGAACAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACttt                                                                                                          <  7:197033/139‑1 (MQ=255)
                                    aGGAACCTAAGGATGAACAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCCTCTAAAATCCGTTGCCCTGCTATTACTTTCGGAg                                                                                                     >  6:253353/1‑139 (MQ=255)
                                    aGGAACCTAAGGATGAACAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGcc                                                                                                                       >  1:233508/1‑121 (MQ=255)
                                    aGGAACCTAAGGATGAACAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGcc                                                                                                                       <  2:233508/121‑1 (MQ=255)
                                    aGGAACCTAAGGATGAACAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACttt                                                                                                          <  8:90374/134‑1 (MQ=255)
                                    aGGAACCTAAGGATGAACAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACttt                                                                                                          >  7:90374/1‑134 (MQ=255)
                                       aaCCTAAGGATGAACAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTg                                                                                                  <  1:136182/139‑1 (MQ=255)
                                         ccTATGGATGTACTGGTTGAAGTTGCCTTCGAAAGCTTTATCGATCTTCTCAGACTCGTAGCTTTGTCTGAGAAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATGCGTTGGCCTGATATTACTTTCGGAGGTTGa                                                                                                <  4:293421/139‑1 (MQ=255)
                                         ccTAAGGATGAACAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCTGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGa                                                                                                <  2:343558/139‑1 (MQ=255)
                                         ccTAAGGATGAACAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGa                                                                                                <  1:261488/139‑1 (MQ=255)
                                         ccTAAGGATGAACAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGa                                                                                                <  4:411083/139‑1 (MQ=255)
                                                 tGAACAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTAt                                                                                         >  1:99226/1‑138 (MQ=255)
                                                   aaCAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGt                                                                                                                                         <  5:49517/88‑1 (MQ=255)
                                                   aaCAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTTCCCTGCTATTACTTTCGGAGGTGGa                                                                                                <  4:302547/129‑1 (MQ=255)
                                                   aaCAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGa                                                                                                >  3:302547/1‑129 (MQ=255)
                                                   aaCAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGa                                                                                                >  3:155940/1‑129 (MQ=255)
                                                   aaCAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGa                                                                                                <  4:155940/129‑1 (MQ=255)
                                                   aaCAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGtt                                                                                           >  5:300754/1‑134 (MQ=255)
                                                   aaCAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGtt                                                                                           <  6:300754/134‑1 (MQ=255)
                                                   aaCAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCATTCTCACAACGt                                                                                                                                         >  6:49517/1‑88 (MQ=255)
                                                    aCAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAat                                                                                     >  4:134753/1‑139 (MQ=255)
                                                    aCAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAat                                                                                     >  4:236445/1‑139 (MQ=255)
                                                      aGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAatca                                                                                   <  2:99226/139‑1 (MQ=255)
                                                       ggTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAatcat                                                                                  <  1:90125/139‑1 (MQ=255)
                                                        gTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAatcatc                                                                                 <  2:86185/139‑1 (MQ=255)
                                                             aGTTGCCATCTAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTa                                                                            <  3:128064/139‑1 (MQ=255)
                                                             aGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTa                                                                            <  8:76970/139‑1 (MQ=255)
                                                             aGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTa                                                                            <  1:62651/139‑1 (MQ=255)
                                                               ttGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTACa                                                                          <  3:236445/139‑1 (MQ=255)
                                                                 gCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTACaa                                                                         <  1:266777/138‑1 (MQ=255)
                                                                 gCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTACaa                                                                         <  3:134753/138‑1 (MQ=255)
                                                                 gCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTACaa                                                                         <  6:234294/138‑1 (MQ=255)
                                                                 gCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTACaa                                                                         <  3:89601/138‑1 (MQ=255)
                                                                  ccATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTACAAcc                                                                       >  8:52819/1‑139 (MQ=255)
                                                                  ccATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTGGCCCTGCGATTACTTTCGGAGGTGGCCAGTGATGAATCATCGTGTACAAcc                                                                       >  6:224245/1‑139 (MQ=255)
                                                                      cGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTACAACCtat                                                                    >  8:308621/1‑138 (MQ=255)
                                                                         aaGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTACAACCTattatt                                                                <  7:52819/139‑1 (MQ=255)
                                                                           gCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTACAACCTATTATTGc                                                              <  7:308621/139‑1 (MQ=255)
                                                                                    aaCTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTACAACCTATTATTGCTGTATTAAt                                                     <  2:214452/139‑1 (MQ=255)
                                                                                                   aaGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTACaa                                                                         >  3:117191/1‑104 (MQ=255)
                                                                                                   aaGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTACaa                                                                         <  4:117191/104‑1 (MQ=255)
                                                                                                       aTTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTACAACCTATTATTGCTGTATTAATTGCGCTGGGAGCGTTCGGt                                  <  5:253353/139‑1 (MQ=255)
                                                                                                       aTTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTACAACCTATTATTGCTGTATTAATTGCGCTGGGAGCGTTCGGt                                  <  5:27877/139‑1 (MQ=255)
                                                                                                       aTTGGCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTACAACCTATTATTGCTGTATTAATTGCGCTGGGAGCGTTCGGt                                  <  6:40271/139‑1 (MQ=255)
                                                                                                          gTCTGAGCAAAATCAGAAGCCTTCTCACAATGTCATCTAAAATCCGTTGCCCTGCTa                                                                                                                 >  7:258247/1‑57 (MQ=255)
                                                                                                          gTCTGAGCAAAATCAGAAGCCTTCTCACAATGTCATCTAAAATCCGTTGCCCTGCTa                                                                                                                 <  8:258247/57‑1 (MQ=255)
                                                                                                          gTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGa                                                                                                <  7:204095/74‑1 (MQ=255)
                                                                                                          gTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGa                                                                                                >  8:204095/1‑74 (MQ=255)
                                                                                                          gTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTa                                                                            <  3:335741/94‑1 (MQ=255)
                                                                                                          gTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTa                                                                            >  4:335741/1‑94 (MQ=255)
                                                                                                          gTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTACAACCTATTATTGCTGTATTAATTGCGCTGGGAGCGTTCGGttt                                <  1:366908/138‑1 (MQ=255)
                                                                                                          gTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTACAACCTATTATTGCTGTATTAATTGCGCTGGGAGCGTTCGGttt                                <  8:138374/138‑1 (MQ=255)
                                                                                                          gTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTACAACCTATTATTGCTGTATTAATTGCGCTGGGAGCGTTCGGTTTc                               >  3:57728/1‑139 (MQ=255)
                                                                                                             tGAGCAAAATCAGAAGCCTTCTCACAATGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGa                                                                                                <  5:193573/71‑1 (MQ=255)
                                                                                                             tGAGCAAAATCAGAAGCCTTCTCACAATGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGa                                                                                                >  6:193573/1‑71 (MQ=255)
                                                                                                                gCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTAtt                                                                                                               >  7:181705/1‑53 (MQ=255)
                                                                                                                gCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTAtt                                                                                                               <  8:181705/53‑1 (MQ=255)
                                                                                                                    aaTCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTACAACCTATTATTGCTGTATTAATTGCGCTGGGAGCGTTCGGTTTCCTCTATGTGc                     >  6:404143/1‑139 (MQ=255)
                                                                                                                     aTCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTACaa                                                                         >  6:395824/1‑86 (MQ=255)
                                                                                                                     aTCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTACaa                                                                         <  5:395824/86‑1 (MQ=255)
                                                                                                                           aGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTACAACCTATTATTGCTGTCTTAATTGCGCTGGGAGCGTTCGGTTTCCTCTATGTGCTGGTAAc              <  5:177799/139‑1 (MQ=255)
                                                                                                                                    acaACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTACAACCTATTATTGCTGTATTAATTGCGCTGGGAGCGTTCGGTTTCCTCTATGTGCTGGTAACAAATCCCg      >  3:9876/1‑138 (MQ=255)
                                                                                                                                        cGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTACAACCTATTATTGCTGTATTAATTGCGCTGGGAGCGTTCGGTTTCCTCTATGTGCTGGTAACCAATCCCGgaga  >  7:80297/1‑138 (MQ=255)
                                                                                                                                        cGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTACAACCTATTATTGCTGTATTAATTGCGCTGGGAGCGTTCGGTTTCCTCTATGTGCTGGTAACCAATCCCGgaga  >  3:14957/1‑138 (MQ=255)
                                                                                                                                        |                                                                                                                                         
GGTACCCGGGACTTTGGCTTCAGCTGTTAACCACAAAGGAACCTAAGGATGAACAGGTTGAAGTTGCCATCGAAAGCTTTAACGAACTTCTCAGACTCGAAGCATTGTCTGAGCAAAATCAGAAGCCTTCTCACAACGTCATCTAAAATCCGTTGCCCTGCTATTACTTTCGGAGGTGGACAGTTATGAATCATCGTGTACAACCTATTATTGCTGTATTAATTGCGCTGGGAGCGTTCGGTTTCCTCTATGTGCTGGTAACCAATCCCGGAGA  >  BS168_reference_genome/2541862‑2542135

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: