| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | BS168_reference_genome | 3,770,066 | (A)8→9 | intergenic (‑258/+38) | ywzF ← / ← csbD | conserved protein of unknown function/stress response protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 3,770,058 | 1 | . | A | 97.5% | 244.5 / ‑1.2 | 79 | intergenic (‑250/+46) | ywzF/csbD | conserved protein of unknown function/stress response protein |
| Reads supporting (aligned to +/- strand): ref base . (2/0); new base A (50/27); total (52/27) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.44e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.69e-01 | |||||||||||
TATAAAAGTTTACAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCG‑‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCTTCAGC > BS168_reference_genome/3769928‑3770187 | tataAAAGTTTACAACTTATGTCATCATTATATAGAAGACGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCG‑‑a‑‑a‑aa < 5:262605/135‑1 (MQ=255) cAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAATGCGA‑A‑‑A‑AAAAAAGACAAGa > 5:238370/1‑135 (MQ=255) cAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGa > 8:276215/1‑135 (MQ=255) aaCTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGaaa > 3:67112/1‑136 (MQ=255) tcatcaTTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGt > 7:67973/1‑136 (MQ=255) tcatcaTTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGt > 5:67371/1‑136 (MQ=255) atTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAATAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCt > 6:159388/1‑136 (MQ=255) atTATATAGAAGAGGCCTATTAATTCAAAGAATATTAAAAAAATTTAGTTACCTTGACCAAATCCGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTcc < 6:13395/135‑1 (MQ=255) tatataGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACTAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGc > 6:212472/1‑136 (MQ=255) tatataGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACTTCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGc > 6:276493/1‑136 (MQ=255) atataGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGcc > 6:4072/1‑136 (MQ=255) agagGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCg > 2:367137/1‑136 (MQ=255) agGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACTTCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTa > 6:234539/1‑136 (MQ=255) agGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTa > 1:187788/1‑136 (MQ=255) agGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTa > 3:408458/1‑136 (MQ=255) agGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTa > 2:296490/1‑136 (MQ=255) agGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTa > 7:53545/1‑136 (MQ=255) agGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTa > 1:273727/1‑136 (MQ=255) agGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCATCTTCCGTa > 4:27221/1‑136 (MQ=255) agGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCATGACTCTTCAGTa > 6:313654/1‑136 (MQ=255) agGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCG‑‑a‑‑a‑aaa < 2:148790/98‑1 (MQ=255) agGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCG‑‑a‑‑a‑aaa > 1:148790/1‑98 (MQ=255) ggCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACTAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTAc < 5:212472/136‑1 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTAc > 5:21848/1‑135 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTAc > 6:148510/1‑135 (MQ=255) ccTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACTTTTCGTTTCCTGCCTCTGCCGTACGa > 6:92402/1‑136 (MQ=255) ccTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGa > 3:84759/1‑136 (MQ=255) ccTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGa > 7:369342/1‑136 (MQ=255) tATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATTTTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAACACAAGAAACATTACGTTTCCTGCCTCTTCCGTACGAt > 2:363181/1‑135 (MQ=255) tATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAA‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 1:73564/1‑136 (MQ=255) tATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAA‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 7:262659/1‑136 (MQ=255) tATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAA‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 1:43138/1‑136 (MQ=255) tATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAtt > 1:336815/1‑136 (MQ=255) tATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 8:137470/1‑135 (MQ=255) tATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 4:406815/1‑135 (MQ=255) tATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 8:268628/1‑135 (MQ=255) tATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 3:95169/1‑135 (MQ=255) tATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 7:126136/1‑135 (MQ=255) tATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 3:159821/1‑135 (MQ=255) tATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 1:56220/1‑135 (MQ=255) tATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 2:389027/1‑135 (MQ=255) tATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGAACGAt > 4:403539/1‑135 (MQ=255) tATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCG‑‑a‑‑a‑aaa < 6:10047/93‑1 (MQ=255) tATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCG‑‑a‑‑a‑aaa > 5:10047/1‑93 (MQ=255) tATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCG‑‑A‑‑ACAAAAACGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 4:59247/1‑135 (MQ=255) aTTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCt > 2:253694/1‑136 (MQ=255) aTTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCt > 6:260105/1‑136 (MQ=255) aaaGAATATTTAAAAAATTTAGTTACCTTCACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCG‑‑AATA‑AAAAAAGACAAGAAACATTTCGTTTCCTGCGACTTCCGTAAGATTATTCTTTa > 3:415233/1‑136 (MQ=255) aaGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATc < 6:69113/136‑1 (MQ=255) ttAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTGTATCTGAAAAtt > 7:98965/1‑136 (MQ=255) aaaaaTTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTa < 7:268628/135‑1 (MQ=255) aaaaaTTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTAt < 4:67112/136‑1 (MQ=255) tttAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTg > 7:27162/1‑136 (MQ=255) tttAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTg < 1:303020/136‑1 (MQ=255) gACCAAATCAGCTTCTTTTTTTGTTATATTTAATCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGa < 6:121082/134‑1 (MQ=255) ccAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATc < 5:415298/136‑1 (MQ=255) aaaTCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCt > 2:232616/1‑136 (MQ=255) aaaTCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCt > 8:47483/1‑136 (MQ=255) aaaTCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCt > 2:231533/1‑136 (MQ=255) gCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGa < 1:389027/136‑1 (MQ=255) gCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTAGGCTTTCCCGATATCCTTTTGGa < 6:21848/136‑1 (MQ=255) gCTTCTTTTTTTGTTATATTTAATCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGa < 6:198048/136‑1 (MQ=255) cttcttTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAA‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGa < 2:43138/136‑1 (MQ=255) cttTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTc > 4:293230/1‑136 (MQ=255) tttttGTTATATTTATTGACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGc < 8:126136/135‑1 (MQ=255) tttttGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAAGATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGc < 5:385686/135‑1 (MQ=255) tttttGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGc < 8:27162/135‑1 (MQ=255) tttttGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGc < 5:113709/135‑1 (MQ=255) tttttGTTATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGc < 7:47483/135‑1 (MQ=255) ttATATTTATTCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTg < 4:397921/135‑1 (MQ=255) tatttattCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCt < 7:185836/135‑1 (MQ=255) tttattCACATCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTAt > 7:214674/1‑136 (MQ=255) aTCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGc > 2:28549/1‑136 (MQ=255) aTCAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGc < 1:253694/136‑1 (MQ=255) cAGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCt < 3:27221/136‑1 (MQ=255) acaaaaaGCGAAA‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTATATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCt < 4:415233/134‑1 (MQ=255) aGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCtt > 8:354643/1‑136 (MQ=255) aGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCtt > 3:195278/1‑136 (MQ=255) aGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCt < 5:234539/135‑1 (MQ=255) aGAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCt < 5:260105/135‑1 (MQ=255) gAAAAAGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCtt > 4:346696/1‑135 (MQ=255) aaaGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCTTCAGc < 4:408458/136‑1 (MQ=255) aaaGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCTTCAGc < 4:159821/136‑1 (MQ=255) aaaGCGA‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCTTCAGc < 1:367137/136‑1 (MQ=255) | TATAAAAGTTTACAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCG‑‑A‑‑A‑AAAAAAGACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCTTCAGC > BS168_reference_genome/3769928‑3770187 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |