| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | BS168_reference_genome | 2,387,885 | (A)7→8 | coding (704/735 nt) | yphF ← | putative lipoprotein of unknown function |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 2,387,878 | 1 | . | A | 91.5% | 1038.9 / 86.7 | 306 | coding (711/735 nt) | yphF | putative lipoprotein of unknown function |
| Reads supporting (aligned to +/- strand): ref base . (7/19); new base A (161/119); total (168/138) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.47e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 336 total aligned reads displayed.
AACACAGGACACTATATGTGTATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑A‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCTTTTTTTGAGGCAAGAAGCCAGCTCAG > BS168_reference_genome/2387729‑2388023 | aaCACAGGACACTATATGTGTATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCt < 1:3819017/150‑1 (MQ=255) acacAGGACACTATATGTGTATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑a > 2:3316738/1‑150 (MQ=255) acacAGGACACTATATGTGTATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑a < 2:2251186/150‑1 (MQ=255) gACACTATTTGTGTATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑a‑aaa‑a‑aa < 1:2016499/150‑1 (MQ=255) acacTATATGTGTATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑a‑aaa‑a‑aaa > 2:4270595/1‑149 (MQ=255) acacTATATGTGTATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑a‑aaa‑a‑aaa < 1:1355342/150‑2 (MQ=255) acTATATGTGTATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑a‑aaa‑a‑aaaaa < 2:579448/150‑4 (MQ=255) cTATATGTGTATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑a‑aaa‑a‑aaacag < 1:3283379/150‑5 (MQ=255) tatGTGTATGCCGTTGTCCTATTTGAATATGACACCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAATATAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTGCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGtt < 2:901036/150‑1 (MQ=255) tatGTGTATGACGTTGTCCTATTTGAATATGACATCTTTAGTAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGtt < 2:4562404/150‑1 (MQ=255) gtgtATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCt < 2:1253398/150‑1 (MQ=255) gtgtATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCt < 2:4023125/150‑1 (MQ=255) tATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGtt > 1:3771617/1‑150 (MQ=255) tATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGtt > 2:3727514/1‑150 (MQ=255) tATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCCCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGtt < 2:710073/150‑1 (MQ=255) gACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGt < 1:4012684/150‑1 (MQ=255) aCGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTc > 2:3220223/1‑150 (MQ=255) gTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑A‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCAtt > 1:1635286/1‑150 (MQ=255) tGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCAttt > 2:3660161/1‑150 (MQ=255) tGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCAttt > 2:3133023/1‑150 (MQ=255) gTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTa < 1:3598130/150‑1 (MQ=255) gTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAAGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTa > 2:2189251/1‑150 (MQ=255) tCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTAc < 2:1086928/150‑1 (MQ=255) ccTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAAGCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTAcc < 1:231680/150‑1 (MQ=255) tATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGt > 1:3677779/1‑150 (MQ=255) aTTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGta > 2:2539231/1‑150 (MQ=255) tttGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTTTGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGGTCCTGTTTGTCATTTTCCGtat > 1:1106317/1‑150 (MQ=255) tttGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGtat > 2:1317162/1‑150 (MQ=255) tttGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGgat > 2:1904808/1‑150 (MQ=255) gAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATAtt > 2:31676/1‑150 (MQ=255) atatGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATAtttt > 2:4617631/1‑150 (MQ=255) atGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTCTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATGTACCGTATGTTTTAc > 2:2681925/1‑150 (MQ=255) gACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAg < 2:1404496/150‑1 (MQ=255) gACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAg < 1:4852129/150‑1 (MQ=255) cATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGGGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATAATTTACAGaa > 2:3584596/1‑150 (MQ=255) cATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATCTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGaa > 2:4818708/1‑150 (MQ=255) aTCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGaaa > 2:2153216/1‑150 (MQ=255) tCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGGAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTTCCGTAAAATTTACAGaaaa > 1:4722660/1‑150 (MQ=255) tCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGaaaa > 2:3512111/1‑150 (MQ=255) tCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGaaaa > 2:2900586/1‑150 (MQ=255) ttttgtaaaTTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAAcg < 2:4872358/144‑1 (MQ=255) tttAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAAcg > 1:4268034/1‑150 (MQ=255) tAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAAcgcg < 2:2017726/150‑1 (MQ=255) aaaaTTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGGTTGTCATTTACCGTATATTTTACAGAAAACGCgggg > 2:1122550/1‑150 (MQ=255) aTTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGGAAACGCGGGGACa > 1:3451602/1‑150 (MQ=255) tttCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑A‑AAA‑ATAA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACaa > 1:1589083/1‑150 (MQ=255) tcATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCACAGGAGAAAGGTTCATTCCTTTTTCCTATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCCTATATTTTACAGAAAACGCGGGGACAAAggg > 1:3093631/1‑150 (MQ=255) cTCATTCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAGGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGttt < 2:3900737/150‑1 (MQ=255) aaTCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCAt > 2:2797183/1‑150 (MQ=255) aTTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAATGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCac > 1:4183660/1‑149 (MQ=255) gtAATATAAATAAACCTTTCTCCCTAGTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCaaa < 1:2105386/149‑1 (MQ=255) atatAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑A‑AAA‑A‑AATCAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCa > 2:3420376/1‑150 (MQ=255) tataAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCat < 1:1785887/150‑1 (MQ=255) taAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCctat > 2:4235821/1‑150 (MQ=255) aaaaaaaCCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATc < 1:2428973/150‑1 (MQ=255) aaaaaCCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCt < 2:1456798/150‑1 (MQ=255) aaaaaCCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGGTCATTCCTTTTTCATTTCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCt > 1:3187611/1‑150 (MQ=255) aaaaaCATTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCt > 1:4324024/1‑150 (MQ=255) aaCCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAAACATATCCTGGa > 2:680122/1‑150 (MQ=255) aCCTTTCTCCCTATTTGTATGCCAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGAt < 1:1247934/150‑1 (MQ=255) cTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGAttt < 1:3480761/150‑1 (MQ=255) tttCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTc > 2:3038168/1‑150 (MQ=255) ctcCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGt < 2:1678004/150‑1 (MQ=255) tcCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATACCATTTCCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTc < 2:2429058/150‑1 (MQ=255) cccTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGGTTTCAGGcc > 2:2379138/1‑150 (MQ=255) ccTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGGTTCATGCCAAATCATATCCTGGATTTCAGTccc > 1:3880451/1‑150 (MQ=255) cTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCg > 1:4437471/1‑150 (MQ=255) tATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAACCATATCCTGGATTTCAGTCCCgg > 2:1585266/1‑150 (MQ=255) aTTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCggg > 2:942823/1‑150 (MQ=255) ttGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGtt < 1:4639083/150‑1 (MQ=255) tGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGttt < 1:2727367/150‑1 (MQ=255) gCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACg < 2:443060/150‑1 (MQ=255) cAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGt > 2:1534004/1‑150 (MQ=255) cAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGt < 1:877872/150‑1 (MQ=255) cAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑ATAAA‑A‑AA‑CACGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGATTCATGCCAAATCATATCCTGGATTTCACTCCCGGGTTTAAACGt < 1:140524/150‑1 (MQ=255) aaGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGtt > 2:3980257/1‑150 (MQ=255) aGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGtct > 2:2276644/1‑148 (MQ=255) gggAGAAGGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGtttt < 2:3268771/150‑1 (MQ=255) gggAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGtttt < 1:2206839/150‑1 (MQ=255) ggAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGttttt > 2:781950/1‑150 (MQ=255) gagaAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTCCAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGtttttt < 2:1711019/150‑1 (MQ=255) gagaAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGtttttt > 2:336317/1‑150 (MQ=255) gagaAAGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGtttttt < 1:1054388/150‑1 (MQ=255) aaaGGTTCTTTCCTTTTTCATACCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGc < 2:1767843/150‑1 (MQ=255) atggTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCt < 1:2333363/148‑1 (MQ=255) aaGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCt < 2:3841618/150‑1 (MQ=255) aGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCtt < 1:976329/150‑1 (MQ=255) aGGTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTCTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCtt > 1:2586649/1‑150 (MQ=255) gTTCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATATCAGTCCCGGGTTTAAACGTTTTTTTGCtttt < 1:621012/150‑1 (MQ=255) ttCATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCttttt < 1:3387523/150‑1 (MQ=255) tCATTCCTTTTCCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCtttttt < 2:2616159/150‑1 (MQ=255) cATTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCttttttt > 1:3147539/1‑150 (MQ=255) cATTCCTTTTTCATACCATTTTCA‑A‑AAACA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCttttttt < 2:4352848/150‑1 (MQ=255) aTTCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGCTTTCAGTCCCGGGTTTAAACGTTATTTTGCTTTTTTTg > 2:3490629/1‑150 (MQ=255) ttCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTTCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCTTTTTTTGa < 2:1631629/150‑1 (MQ=255) ttCCTTTTTCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCTTTTTTTGa > 2:5115/1‑150 (MQ=255) ttttCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCTTTTTTTGGGGCaa > 2:1194368/1‑150 (MQ=255) tttCATATCATTTTCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCTTTTTTTGAGGCaag < 1:2987338/150‑1 (MQ=255) ttttCTAA‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCTTTTTTTGAGGCAAGAAGCCAGCTc < 1:4580550/150‑1 (MQ=255) ttCT‑A‑AAA‑A‑AATCAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCTTTTTTTGAGGCAAGAAGCCAGCTCAg < 1:1503049/150‑1 (MQ=255) | AACACAGGACACTATATGTGTATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑A‑AAA‑A‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCTTTTTTTGAGGCAAGAAGCCAGCTCAG > BS168_reference_genome/2387729‑2388023 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |