| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | Exported | 5,302 | A→C | 5.4% | intergenic (+571/‑586) | ampR → / → lacZalpha | /vntifkey=4//vntifkey=4 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | Exported | 5,302 | 0 | A | C | 5.4% | 50926.2 / inf | 18710 | intergenic (+571/‑586) | ampR/lacZalpha | /vntifkey=4//vntifkey=4 |
| Reads supporting (aligned to +/- strand): ref base A (10519/6644); new base C (97/1366); total (10628/8082) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 0.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 19318 total aligned reads displayed.
TTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACT > Exported/5165‑5441 | gTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACg > 3:246802/1‑139 (MQ=255) ttGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGc > 8:49829/1‑139 (MQ=255) ttGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGc < 8:182296/139‑1 (MQ=255) cAAGACGATAGTTACCGGATAAGGCGCCGCGGGCGGGCTGAACGGGGGGTGCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGa < 5:198816/139‑1 (MQ=255) aaGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCg > 5:267479/1‑137 (MQ=255) aaGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGGGCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGaa < 3:57299/139‑1 (MQ=255) gACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAgg < 4:118401/139‑1 (MQ=255) aTAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGgag > 6:140090/1‑138 (MQ=255) tcgtaaCCGGATAAGGCGCCGCGGGCGGGCTGACCGGGGGGTTCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGaa < 6:248211/134‑1 (MQ=255) ttACCGGATACGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAgg < 3:99550/139‑1 (MQ=255) aCCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTccc > 7:86861/1‑124 (MQ=255) aCCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCg > 2:264916/1‑139 (MQ=255) aCCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCg > 2:152720/1‑139 (MQ=255) ccGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCg < 1:100569/138‑1 (MQ=255) ccGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCG‑CACGCTTCCCGAAGGGAGAAAGGCGGa < 1:1761/139‑1 (MQ=255) cGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGa < 2:7607/139‑1 (MQ=255) cGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGa < 5:169683/139‑1 (MQ=255) ttttAAGGCGGCGGGGGCGGGCTGAAGGGGGGGTTGGTGCAC‑ACAGCCCAGCTTGGAGCTAACGACCTAAACCTAACTGATATACCTACAGCGTTATTTATGAGAACGCGCCACGCTTCCCGAAGGGAGAAAGGCGGAc < 6:161861/136‑1 (MQ=255) aGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTa > 6:199584/1‑139 (MQ=255) aGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTa > 3:133917/1‑139 (MQ=255) ggCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTAt > 4:251093/1‑139 (MQ=255) ggCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTAt > 1:265231/1‑139 (MQ=255) aGCGGTCGGGCTGAACGGGGGGTTCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCgg > 7:189659/1‑138 (MQ=255) gggCTGAACGGGGGGTTCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCgg > 8:14959/1‑138 (MQ=255) gaccGGGGGGTGCGTCCCC‑ACCGCCCAGCTGGGAGCAAACGACCTACACCGAACTCAGAAACCTACAGCGGGCGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGt < 4:67704/136‑1 (MQ=255) gAACGGGGGGTTCGTGCAC‑TCAGCCCTGCTTGGAGCGAACGACCTACACCTAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGt < 2:99316/139‑1 (MQ=255) gAACGGGGGGTTCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACTCCGAACTGAGATCCCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGt < 1:8702/139‑1 (MQ=255) gAACGGGGGGTTCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGACGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGt < 8:83592/139‑1 (MQ=255) gAACGGGGGGTTCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGa < 6:69155/115‑1 (MQ=255) gAACGGGGGGTGCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACCCCGAACTGAGATACCTCCAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGt < 7:241631/139‑1 (MQ=255) aaCGGGGGGTGCGGGCAC‑CCAGCCCAGCTTGGAGCGAACGACCTACCCCGAACTGAGATACCTACAGCGGGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGt < 5:107182/138‑1 (MQ=255) aaggggggGTCGGGGACAACCGCCCAGTGTGGAGCTACCGACAAACACCCAACTCTCATACCTACAGCTGTTGCTTTCACAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACTGGTATCCGGTAAGCGGCAGGGt < 2:53640/136‑1 (MQ=255) gggTTCGTGCAC‑ACAGCCCAGCTAGGAGCGAACGACCTACCCCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGaa > 7:39981/1‑137 (MQ=255) ttCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGga < 1:23890/139‑1 (MQ=255) gtCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCAACACCGAACTGACATACCTACAGCGGTAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGga < 6:265615/138‑1 (MQ=255) tCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGgag > 4:87411/1‑139 (MQ=255) tGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAACGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAgc > 8:34323/1‑139 (MQ=255) acaGCCCAGCGTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGCGAGCGCACg > 7:289134/1‑139 (MQ=255) caGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGt > 4:289900/1‑119 (MQ=255) caGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGa < 4:228712/139‑1 (MQ=255) aGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAgcgc > 2:111301/1‑67 (MQ=255) cccAGCTTGGAGCGAACGACCTACACCGCACTGACATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCATCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAcgg > 6:94089/1‑139 (MQ=255) cccAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGCCAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAggg > 8:105770/1‑139 (MQ=255) cccAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGt > 2:235595/1‑116 (MQ=255) cccAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGt < 3:228878/116‑1 (MQ=255) cccAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAggg > 6:284258/1‑139 (MQ=255) aGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGt < 3:116796/113‑1 (MQ=255) gAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTGAGCGGCAGGGTCGGAACAGGAGAGCGCa < 8:236053/124‑1 (MQ=255) aGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGt < 1:46634/106‑1 (MQ=255) aGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAgg > 2:33747/1‑139 (MQ=255) aGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAgg > 3:179456/1‑139 (MQ=255) aCGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGt < 6:124686/101‑1 (MQ=255) aCGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGa > 8:198509/1‑138 (MQ=255) aCGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGa > 5:89731/1‑138 (MQ=255) tACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGTGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCt > 7:5433/1‑139 (MQ=255) cacCGCACTGAGATACCTACCGCGTGACCTATGAGAACGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCt < 5:142903/137‑1 (MQ=255) ccaaCTGAGATACCTACCCCGTCAGCTAATACAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTAt < 1:156047/137‑1 (MQ=255) cGACCTGAGATACCAACCGCGGGCGCTATGAGAACGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTACGCGGCAGGGGCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTAt < 7:204957/139‑1 (MQ=255) aaCTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGa > 6:223188/1‑49 (MQ=255) aaCTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGt > 1:195071/1‑88 (MQ=255) aaCTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTAt > 8:130014/1‑137 (MQ=255) aaCTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCt > 8:28001/1‑139 (MQ=255) aaCTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCt > 7:22432/1‑139 (MQ=255) aaCTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACCCTTCCCGAAGGGAGAAAGGCGGCCAGGTATCCGGTAAGCGGCAGGGTCGGACCAGGAGCGCGCACGAGGGAGCTGCCAGGGGGAACCGCCTGGTAGCt > 7:266212/1‑139 (MQ=255) aCTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTgg < 7:11624/133‑1 (MQ=255) aCTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCtt > 7:138232/1‑139 (MQ=255) aCTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCtt > 4:269527/1‑139 (MQ=255) aCTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCtt > 2:191118/1‑139 (MQ=255) agaTACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTCTCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTta > 4:149938/1‑137 (MQ=255) agaTACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAACCGCCTGGTATCTTtata > 4:43225/1‑139 (MQ=255) acaTACCTACCGCGTGAGCTATGAGAACGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTtata < 5:66273/137‑1 (MQ=255) ccTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCt > 3:34242/1‑139 (MQ=255) aCAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTc > 7:172517/1‑139 (MQ=255) aGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCgg > 3:28376/1‑139 (MQ=255) cGTGAGCTATTATACCGCCCCACGCATCCCGAAGGGAGAATGGCGGACCGGTAGCCGTTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTAGCTTTATAGTCCTGTCggtt < 8:67573/139‑3 (MQ=255) cGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAATGGCGCACAGGTATCAGGTAAGCGGCAGGCTCGGAACAGGAGAGCGCACGAGGGAGCTACCAGGGGAAAACGCCTGGTATCTATATAGTCCTGTCGGGt > 7:156804/1‑139 (MQ=255) cGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAgg > 1:12835/1‑104 (MQ=255) cGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGt > 1:66331/1‑139 (MQ=255) cGTGAGCTAAGAGAAAGCGCCACGATTCAAGAAGCGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGCTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCggga > 3:205871/1‑138 (MQ=255) tGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGt < 1:2993/69‑1 (MQ=255) tGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGttt > 6:49158/1‑139 (MQ=255) tGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGttt > 5:246691/1‑139 (MQ=255) aGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATc < 6:1084/51‑1 (MQ=255) aGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGga < 5:126717/77‑1 (MQ=255) aGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGaaa < 2:21322/106‑1 (MQ=255) aGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACTCCTGATATCTTTATAGTCCTGTCGGGATTCg > 8:25434/1‑139 (MQ=255) aGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCt > 3:265506/1‑111 (MQ=255) aGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCg > 5:45160/1‑139 (MQ=255) gCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGt > 8:166564/1‑113 (MQ=255) gCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGGCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGc < 3:78730/139‑1 (MQ=255) ccTATGCGAAAGCGCCACGCTTCCCGAAGGGAGAAAGCCGGACAGGTATCCGGTAAGCGGCAGGGTCAGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGc < 2:173824/138‑1 (MQ=255) gagaAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGt > 1:219244/1‑61 (MQ=255) gagaAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTtata > 8:218581/1‑117 (MQ=255) agaAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACctc > 3:150145/1‑139 (MQ=255) aGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCt > 5:285333/1‑100 (MQ=255) aGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGt > 7:70871/1‑103 (MQ=255) aGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGAc > 5:224159/1‑139 (MQ=255) aGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGAc > 4:205691/1‑139 (MQ=255) aGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGCGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGa > 4:18011/1‑138 (MQ=255) aGCGCCACGCTTCCCGAAGAGAGAAAGGCGGACACGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGACGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGAc > 4:134006/1‑139 (MQ=255) | TTACCGGGTTGGACTCAAGACGATAGTTACCGGATAAGGCGCAGCGGTCGGGCTGAACGGGGGGTTCGTGCAC‑ACAGCCCAGCTTGGAGCGAACGACCTACACCGAACTGAGATACCTACAGCGTGAGCTATGAGAAAGCGCCACGCTTCCCGAAGGGAGAAAGGCGGACAGGTATCCGGTAAGCGGCAGGGTCGGAACAGGAGAGCGCACGAGGGAGCTTCCAGGGGGAAACGCCTGGTATCTTTATAGTCCTGTCGGGTTTCGCCACCTCTGACT > Exported/5165‑5441 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |