| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | BS168_reference_genome | 3,935,825 | Δ1 bp | coding (1190/1191 nt) | rlmI ← | large subunit ribosomal RNA m5C1962 methyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 3,935,823 | 0 | T | . | 98.9% | 396.8 / ‑2.0 | 90 | intergenic (+35/+1) | ywbE/rlmI | conserved protein of unknown function/large subunit ribosomal RNA m5C1962 methyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base . (46/42); total (48/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
CAGTGAAGGATATTTTGACGAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCATTTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAGGCGGCAT > BS168_reference_genome/3935685‑3935954 | cAGTGAAGGATATTTTGACGAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGCCCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCat > 2:205555/1‑139 (MQ=255)cAGTGAAGGATATTTTGACGAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGCACAGGGCAGCTTTTTGat > 5:324909/1‑139 (MQ=255)cAGTGAAGGATATTTTGACGAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCat > 3:93434/1‑139 (MQ=255) aaGGATATTTTGACGAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACATAAAAAAAAAGCTGCCCCTGAACAGGGCAGCTTGTTCattatt > 7:415869/1‑136 (MQ=255) agtatatTTTCACCAAATCAAACTTTCCTCCCCATGGCATAAAAGCCCGGCTTGACGATGGCCGCAGGGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTAtttt < 4:94935/136‑1 (MQ=255) agcatatTTTCACCAAATCAAACTTTCAGCCGCAGGGCATAAACGGCCGTCTTTACGATGCCCGCAGCGCCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTAtttt < 2:10223/136‑1 (MQ=255) ggATATTTTGACGAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCAGCCGCGACCAGCACATCGTTTCTACAT‑AAAAAAAATCTGCCCCTCAACAGGGCAGCTTTTT‑AATTAttttt > 8:405792/1‑139 (MQ=255) gATATTTTGACGAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGCTCATTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTAtttttt > 7:97488/1‑139 (MQ=255) gATATTTTGACGAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTAtttttt > 3:531707/1‑139 (MQ=255) gATATTTTGACGAAATCAAACTTTAATCCGCATGGCATTAATGTCGGTCTTGACGAGGGCCGCTTGGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTAtttttt < 6:170897/139‑1 (MQ=255) atTTTGACGAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTg > 1:482493/1‑139 (MQ=255) aatcaaaaaTTTCAGCCGCTTGCCATTAATGTCGGTTTTTAATTTGGCGGCTTCGCCCGCTACCAGCAGATAGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGAc < 2:482493/134‑1 (MQ=255) aaagaaaaCTTTCATCCGCAGGGCATAAAAGTCCGTCGGGACGATGCCCCCAGCGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGTACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGAc < 2:309274/134‑1 (MQ=255) aaaaaaaaTTTTAATCCTAATGCCATTAAAGTCGTTTTTCACTAGGGCCGCTGCGCCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGAc < 5:545195/134‑1 (MQ=255) aaaaaaaaCTTTCATCCGCTTGGAATAAAAGGCGGTCTTCACGATGGCCGAAGCGCCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGAc < 4:531707/134‑1 (MQ=255) aaaaCAAACTTTCATCCGAATGGCTTTAAAGTCCGTCTTTAAGTTGGCCGCAGCGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGAc < 3:459737/139‑1 (MQ=255) aaaTCACACTTCCACCCCCATGCAATTAAAGCCCGGCTTGAACATGCCCCCAGCGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGAc < 4:442396/139‑1 (MQ=255) aaaTCAAACTTTCATCCGCATGGCATTAAAGGCCGTCTTGAAGATGGCCGCATCAGCCGCGACCAGCATATCTTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGAc < 7:405792/139‑1 (MQ=255) aaaTCAAACTTTCAACCCCATGCCATAAACGCCCTCCTGCACGAGGCCCCCATCGCCCGCGACCAGCAGATCGTTTCTACAA‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGAc < 4:450408/139‑1 (MQ=255) aaaTCAAACTTACATCCGAAGGGCATAAACGGCCGTTTTAAAGAGGCCCGCTGGGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGAc < 8:370497/139‑1 (MQ=255) aaaCCAAACTTTCATCCGCTTGCAATTAACGTCCGTCTTGACTTGGGCCGCAGCGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGAc < 5:130070/139‑1 (MQ=255) aaaCCAAACTTCCATCCCCAGGCCATAAACGCCCGTCTTGACGAGGCCCGCCGCGCCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGAc < 5:468090/139‑1 (MQ=255) aaTCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGAc > 2:93622/1‑138 (MQ=255) aTCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGCCCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCAGCACAGGGCAGCTGTTTCA‑TTATTTTTTCTGCAGAAGGAccc > 5:34915/1‑138 (MQ=255) aaaaTTTCATCCGCCTGGCATTAATGTCCGTCTTGACGTGGGCCGCAGCGCCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACtt < 8:275655/139‑1 (MQ=255) atttgaaTCCCCTTGGAATTAACGTCGGTTTTGATGTGGGCCGCCGCGCCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTc < 2:393631/133‑1 (MQ=255) aCTTTCATCCGCATGGCATTAACGTCCGTCTTTATGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTc < 6:386031/139‑1 (MQ=255) aTCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCTCGACCAGCACATCGTTTCTACAT‑AAAAAAAAGCTGCCACTGTACACGGGAGCTTTTTCA‑TTATATTTTATGCAGAAGTCCCCCTTTAAGGTAg > 1:370489/1‑139 (MQ=255) cATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGcc > 7:431028/1‑139 (MQ=255) aaGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAAt > 4:181225/1‑139 (MQ=255) cGTCTTGAAGATGGCCGCATTGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGAc > 3:178915/1‑106 (MQ=255) cGTCTTGAAGATGGCCGCATTGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGAc < 4:178915/106‑1 (MQ=255) cGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACTT‑AAAAAAAAACTGACCCTGAACAGGGCAGCTTTTTGA‑TTATTTTTTCTGCAGAAGGACCCCTATCAGGTAGATGCCTTACGGAAATGACg > 7:342971/1‑138 (MQ=255) cGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCg > 5:138367/1‑138 (MQ=255) cGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCg > 1:303628/1‑138 (MQ=255) cGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCg > 4:268408/1‑138 (MQ=255) cGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCg > 7:30431/1‑138 (MQ=255) cGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTATTCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCg > 6:58746/1‑138 (MQ=255) cGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTAATTT‑TTTTTTATGCAGAAGGACCACTTTCAGGTATTTGCCTTCCGGAAATGCCg > 7:215122/1‑138 (MQ=255) ggCCGCATCGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTGA‑TTATTTTTTATGCAGAAGGACCACTTTAAGGTATTTGCCTTCCGGAAATGCCGAAAAGGTTTTGa > 2:269210/1‑138 (MQ=255) ggCCGCATCGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGa > 4:224649/1‑138 (MQ=255) ggCCGCATCGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGa > 6:45483/1‑138 (MQ=255) ggCCGCATCGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGa > 7:213430/1‑138 (MQ=255) ggCCGCATCGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGa > 3:161450/1‑138 (MQ=255) ggCCGCATCGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCACGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGa > 4:304974/1‑138 (MQ=255) ccGCATCGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGTACCAATTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAAt > 2:368374/1‑139 (MQ=255) ggCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCgg < 8:431028/139‑1 (MQ=255) ggCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCgg < 3:181225/139‑1 (MQ=255) gCCGCGACCAGCAGATCTTTTCTACAT‑AAAAAAAAGCTGCCGCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTTGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATGCTCCGGc > 6:259638/1‑139 (MQ=255) cccGCGACCAGCATATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGc < 1:269210/138‑1 (MQ=255) ccGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCa < 3:3690/139‑1 (MQ=255) aCCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGt > 8:170058/1‑138 (MQ=255) cagaagATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTaaa < 8:502529/139‑1 (MQ=255) gcagATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGACATCCTCCGGCAGCGTAAAtt > 5:102052/1‑139 (MQ=255) cagCTCGTTTCTACAT‑AAAAAAACGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTc < 4:56571/139‑1 (MQ=255) aTCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTc < 8:213430/139‑1 (MQ=255) cgattCTAAAA‑AATAAAAACATGACACTGATCAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGAACACTTTCAGGTAGTTGCCTTACGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCaa < 2:227319/136‑1 (MQ=255) gTTTGTAAAT‑AAATAAAAGCTGCCCCTGAAGAGGGCAGCTTTTTGA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGGCTTCCGGTAATGCCGATATCGTTTTGTAATCCTCCGGCAGCGTAAATTCCTCaa < 4:42925/138‑1 (MQ=255) gTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCaa < 2:303628/138‑1 (MQ=255) gTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAAt > 7:521293/1‑139 (MQ=255) gTTTCTAAAT‑TAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATTCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCaa < 6:517800/138‑1 (MQ=255) tttCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAAt > 8:262908/1‑138 (MQ=255) ttatACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCaa < 2:531245/133‑1 (MQ=255) ttCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAATTTCCTCAATGa > 2:354848/1‑139 (MQ=255) ttCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAACTTCCTCAATGa > 8:419258/1‑139 (MQ=255) tCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGa < 4:557240/138‑1 (MQ=255) cTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATc > 4:104674/1‑139 (MQ=255) cAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGACATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCgtg > 7:30410/1‑139 (MQ=255) cAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCgtg < 6:34915/139‑1 (MQ=255) cAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCgtg < 8:215122/139‑1 (MQ=255) cAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCgtg < 3:268408/139‑1 (MQ=255) t‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTa < 7:170058/139‑1 (MQ=255) aaaaaaGCTGCCCCTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCg > 6:525528/1‑139 (MQ=255) caGCTGCCCCTGTACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCa < 2:370489/138‑1 (MQ=255) ccccTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGt < 4:161450/138‑1 (MQ=255) ccccTGAACAGGGCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGt < 1:499015/138‑1 (MQ=255) ccccTGAACAGGGAAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGt < 4:300814/138‑1 (MQ=255) gggCAGCTTTTTCA‑TTATTTTTTATGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTACACAATGAACGTGTAGGGTTCATTTGTATCTTTAAAgg > 2:107564/1‑139 (MQ=255) ggCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCaa < 3:327253/105‑1 (MQ=255) ggCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCaa > 4:327253/1‑105 (MQ=255) ggCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAggc > 1:395989/1‑139 (MQ=255) ggCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAggc > 8:283436/1‑139 (MQ=255) ggCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAggc > 3:419043/1‑139 (MQ=255) ggCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAggc > 3:65320/1‑139 (MQ=255) ggCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAggc > 3:531495/1‑139 (MQ=255) ggCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAggc > 2:115010/1‑139 (MQ=255) ggCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAggc > 6:469167/1‑139 (MQ=255) ggCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAggc > 5:426389/1‑139 (MQ=255) ggCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAggc > 7:102217/1‑139 (MQ=255) ggCAGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCAGTTGTTTCTTTAACggc > 7:170408/1‑139 (MQ=255) aGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAggcggc < 8:102217/139‑1 (MQ=255) aGCTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAggcggc < 3:280321/139‑1 (MQ=255) cTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGGTCATTTGTTTCTTTAAAGGCGGCAt > 7:484004/1‑139 (MQ=255) cTTTTTCA‑TTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATAGTGTAGCGTTGATTTGTTTTTTTTAAagcgggaa > 2:531147/1‑136 (MQ=255) | CAGTGAAGGATATTTTGACGAAATCAAACTTTCATCCGCATGGCATTAAAGTCCGTCTTGAAGATGGCCGCATCGGCCGCGACCAGCAGATCGTTTCTACAT‑AAAAAAAAGCTGCCCCTGAACAGGGCAGCTTTTTCATTTATTTTTTCTGCAGAAGGACCACTTTCAGGTAGTTGCCTTCCGGAAATGCCGAAATCGTTTTGAAATCCTCCGGCAGCGTAAATTCCTCAATGATCGTGTAGCGTTCATTTGTTTCTTTAAAGGCGGCAT > BS168_reference_genome/3935685‑3935954 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |