| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | BS168_reference_genome | 2,387,885 | (A)7→8 | coding (704/735 nt) | yphF ← | putative lipoprotein of unknown function |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 2,387,878 | 1 | . | A | 94.8% | 327.7 / 8.7 | 97 | coding (711/735 nt) | yphF | putative lipoprotein of unknown function |
| Reads supporting (aligned to +/- strand): ref base . (4/1); new base A (51/41); total (55/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.85e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 124 total aligned reads displayed.
GTGTATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑AAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCTTTTTTTGAGGCAA > BS168_reference_genome/2387746‑2388010 | gtgtATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑aaaaa > 2:515150/1‑138 (MQ=255)gtgtATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCT‑‑ATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑aaaaa‑aaa > 5:125815/1‑138 (MQ=255) gtATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑aaaaa‑aaa > 1:25942/1‑138 (MQ=255) taagACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑aaaaa‑aaa > 6:519840/4‑137 (MQ=255) tATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCATTCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑aaaaa‑aaa > 3:422248/1‑137 (MQ=255) tATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCTTTCCTTTTTCATATCATTTTCT‑aaaaacaa > 8:537133/1‑135 (MQ=255) tATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑aaaaa‑aaa > 4:209898/1‑137 (MQ=255) tATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑aaaaa‑aaa > 5:122948/1‑137 (MQ=255) tATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑aaaaa‑aaa > 5:395008/1‑137 (MQ=255) tATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑aaaaa‑aaa > 1:31842/1‑137 (MQ=255) tATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑aaaaa‑aaa > 7:428128/1‑137 (MQ=255) tGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATATAAAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑aaaaa‑aaaca > 1:249828/1‑136 (MQ=255) tGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGTGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑AAAAA‑AA‑ccag > 6:34734/1‑136 (MQ=255) tGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAATGTTCATTCATTTTTCATATCATTTTCT‑aaaaa‑aaacag > 1:247354/1‑135 (MQ=255) tGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑aaaaa‑aaacag > 3:317099/1‑135 (MQ=255) tGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑aaaaa‑aaacag > 3:451899/1‑135 (MQ=255) tGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑aaaaa‑aaacag > 2:447694/1‑135 (MQ=255) tGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑aaaaa‑aaacag > 4:449716/1‑135 (MQ=255) tGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑aaaaa‑aaacag > 4:45951/1‑135 (MQ=255) tGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑aaaaa‑aaacag > 6:462229/1‑135 (MQ=255) tGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑aaaaa‑aaacag > 7:565996/1‑135 (MQ=255) tGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑aaaaa‑aaacag > 8:224378/1‑135 (MQ=255) tGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑aaaaa‑aaacag > 1:463998/1‑135 (MQ=255) tGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑aaaaa‑aaacag > 1:344254/1‑135 (MQ=255) tGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑AAAAATAA‑CAg > 2:175948/1‑139 (MQ=255) tGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑AAAAA‑AA‑CAgg > 2:383109/1‑139 (MQ=255) aCGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGt > 7:91300/1‑139 (MQ=255) cGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGtt < 2:553627/139‑1 (MQ=255) ttGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATACTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGAAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTcc > 3:455945/1‑139 (MQ=255) tGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGTTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCt > 5:438034/1‑139 (MQ=255) tGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCt > 3:437602/1‑139 (MQ=255) tGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCt > 3:233375/1‑139 (MQ=255) tGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCt > 3:126114/1‑139 (MQ=255) tGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCt > 1:197044/1‑139 (MQ=255) gTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTg > 7:81119/1‑139 (MQ=255) tCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGt > 7:56908/1‑139 (MQ=255) tCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGt < 4:451899/139‑1 (MQ=255) tCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGt > 8:276291/1‑139 (MQ=255) tCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGt > 2:136452/1‑139 (MQ=255) tCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCAATCCTTATTCAAATCATATTCTAAAAAA‑AA‑CAGCTACCTGt > 6:197914/1‑139 (MQ=255) gAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCAt < 1:134804/138‑1 (MQ=255) atatGACATCTTTAGAAAATTTCTCATCCTCAATCTTTTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCATTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTa > 7:549951/1‑139 (MQ=255) atatGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGTAGAAAGGTTCATTCATTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTa > 3:268641/1‑139 (MQ=255) atatGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTa > 7:527692/1‑139 (MQ=255) atatGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCGGTTTGTCATTTa > 3:172594/1‑139 (MQ=255) atGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTAcc > 7:38318/1‑139 (MQ=255) tGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTAcc < 6:235641/138‑1 (MQ=255) tGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTAcc < 5:261682/138‑1 (MQ=255) tGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTAcc < 2:197044/138‑1 (MQ=255) tGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTAcc < 7:224378/138‑1 (MQ=255) tGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTAcc < 2:344254/138‑1 (MQ=255) aCATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGta > 1:500030/1‑139 (MQ=255) aCATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGt < 3:209898/138‑1 (MQ=255) aCATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGt < 6:395008/138‑1 (MQ=255) cTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATAtt > 8:254868/1‑139 (MQ=255) cTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTCTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTACCTGTTTGTCATTTACCGTATAtt > 2:285244/1‑139 (MQ=255) aaTTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGa > 8:445918/1‑138 (MQ=255) aTCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAAcgcg < 3:211942/137‑1 (MQ=255) aTCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAAcgcg < 6:122948/137‑1 (MQ=255) aTCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCggg < 8:81119/139‑1 (MQ=255) aTCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCggg < 4:126114/139‑1 (MQ=255) aTCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCgg < 1:437679/138‑1 (MQ=255) aTCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACAGTATATTTTACAGAAAACGCggg > 5:321426/1‑139 (MQ=255) aTCCTCAATATATTAATAT‑ATAAAAACCTTTCTCCCTATTTTTATGCAAGGGAGATAGGTTCATTCCTTTATCATATCATTTTCT‑AAAAA‑AATCAGGTTGCTGTTTGTCATTTACCGTATATTTTACAGAAAAcgcg < 5:197914/137‑1 (MQ=255) ttAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGt > 1:247766/1‑139 (MQ=255) ttAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGt > 1:137328/1‑139 (MQ=255) ttAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGt > 1:191814/1‑139 (MQ=255) ttAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGt > 5:10924/1‑139 (MQ=255) tat‑aAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCTTTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCa > 3:446862/1‑139 (MQ=255) aaaaaaCCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGcc < 8:428128/139‑1 (MQ=255) aaCCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAATCCGGGGTTCATGcaacat > 8:444415/1‑134 (MQ=255) ttCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCatat > 3:420659/1‑139 (MQ=255) tctcCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATc > 1:570229/1‑139 (MQ=255) ctcCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATc < 2:570229/138‑1 (MQ=255) ccTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTg < 5:462229/138‑1 (MQ=255) aTTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGAtt > 6:467855/1‑139 (MQ=255) tATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGt > 2:285347/1‑139 (MQ=255) aTGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTc > 7:318003/1‑139 (MQ=255) tGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTcc > 7:189858/1‑139 (MQ=255) tGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATAGCCTGGATTTCAGTcc > 3:90982/1‑139 (MQ=255) cAAGGGAGAAAGTTTCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTccc < 7:254868/138‑1 (MQ=255) ttCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGttt > 8:5102/1‑139 (MQ=255) ttCATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGttt > 4:142541/1‑139 (MQ=255) cATTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGttttt > 1:397621/1‑139 (MQ=255) aTTCCTTTTTCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGtttttt < 2:463998/139‑1 (MQ=255) ttttCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCttt > 5:104172/1‑139 (MQ=255) tttCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGGtttt > 2:501786/1‑139 (MQ=255) tttCATATCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCtttt > 1:73802/1‑139 (MQ=255) atatCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAATCGTTTTTTTGCttttttt < 4:268641/138‑1 (MQ=255) atatCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCttttttt < 5:34734/138‑1 (MQ=255) atatCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCttttttt < 2:31842/138‑1 (MQ=255) atatCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCttttttt < 8:527692/138‑1 (MQ=255) tatCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCTTTTTTTGa < 5:519840/139‑1 (MQ=255) tatCATTTTCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCTTTTTTTGa < 1:136452/139‑1 (MQ=255) aTTTTCTAAAAAA‑AA‑CAGGTGCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCTTTTTTTGAGGc < 2:247354/138‑1 (MQ=255) ttttCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCTTTTTTTGAGGCaa < 8:318003/139‑1 (MQ=255) ttttCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCTTTTTTTGAGGCaa < 4:505980/139‑1 (MQ=255) ttttCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCTTTTTTTGAGGCaa < 2:73802/139‑1 (MQ=255) ttttCTAAAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCTTTTTTTGAGGCaa < 8:565996/139‑1 (MQ=255) ttttCTAAAAAA‑AA‑CAGGGTCCTGGTTGTCTTTTAACGGATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTACACGTTTTTTAGCTTTTTTTGAGGCaa < 7:444415/139‑1 (MQ=255) | GTGTATGACGTTGTCCTATTTGAATATGACATCTTTAGAAAATTTCTCATCCTCAATCTATTAATAT‑AAAAAAACCTTTCTCCCTATTTGTATGCAAGGGAGAAAGGTTCATTCCTTTTTCATATCATTTTCT‑AAAAA‑AA‑CAGGTTCCTGTTTGTCATTTACCGTATATTTTACAGAAAACGCGGGGACAAAGGGGGTTTCATGCCAAATCATATCCTGGATTTCAGTCCCGGGTTTAAACGTTTTTTTGCTTTTTTTGAGGCAA > BS168_reference_genome/2387746‑2388010 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |