| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | BS168_reference_genome | 1,074,835 | C→T | G110G (GGG→GGA) | trpP ← | tryptophan transporter or sensor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 1,074,835 | 0 | C | T | 98.3% | 401.7 / ‑1.8 | 115 | G110G (GGG→GGA) | trpP | tryptophan transporter or sensor |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base T (58/55); total (59/56) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.86e-01 | |||||||||||
Only 100 of 115 total aligned reads displayed.
TAAATAATGATCATTGAGATTGTATTCAGCACAGCGGCCGGCAGAACAACAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTCCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGATACGGGTTTATCAATGATGTTAGGGATCTGTCCGGCTGGAAACGC > BS168_reference_genome/1074701‑1074963 | taaataaTGATCATTGAAATTGTATTCAGCACAGCGGCCGGCAGAACAACAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGGTAAGATGGTTCCGa > 1:344502/1‑139 (MQ=255) aataatTATAATTCAAATTTTATTCCCCCCCGCGGCCGGCATAACACCACCCGCGAACAAGGCGGCTAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGGTAAGATGGTTCCGATc < 2:344502/139‑1 (MQ=255) aatGATCATTGAGATTGTATTCAGCACAGCGGCCGGCAGAACAACAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACACTTCCTGATAAGATGGTTCCGATCACt > 4:462631/1‑139 (MQ=255) aTCATTGAGATTGTATTCAGCACAGCGGCCGGCAGAACAACAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGt > 5:171148/1‑137 (MQ=255) aTCATTGAGATTGTATTCAGCACAGCGGCCGGCAGAACAACAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTAACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGt > 3:542418/1‑137 (MQ=255) aTTGAGCTTGTATGCAGCACAGCGGCCGGCAGAACAACAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAg < 5:312592/137‑1 (MQ=255) ttGAGATTGTATTCAGCACAGCGGCCGGCAGAACAACAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATc < 3:364278/128‑1 (MQ=255) ttGAGATTGTATTCAGCACAGCGGCCGGCAGAACAACAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATc > 4:364278/1‑128 (MQ=255) tGAGATTGTATTCAGCACAGCGGCCGGCAGAACAACAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGca > 7:20458/1‑137 (MQ=255) aTTGTATTCAGCACAGCGGCCGGCAGAACAACAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCgg < 7:466222/139‑1 (MQ=255) gTATTCAGCACAGCGGCCGGCAGAACAACAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAATCGACGATCAATAAAGCTGCCGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTg > 2:153683/1‑139 (MQ=255) tATTCAGCACAGCGGCCGGCAGAACAACAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGc > 3:72315/1‑139 (MQ=255) cAGCACAGCGGCCGGCAGAACAACAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCt > 7:530898/1‑139 (MQ=255) ggCACCGCGGCGGGCACAACAACCGCCGCTAAAACTGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTg < 2:336660/138‑1 (MQ=255) aGCACAGCGGCCGGCAGAACAACAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTg > 4:518508/1‑139 (MQ=255) cacaGCGGCCGGCAGAACAACAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACGCAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGtt > 7:46453/1‑139 (MQ=255) caGCGGCCGGCAGAACAACAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGtttt < 3:552099/139‑1 (MQ=255) aGCGGCCGGCAGAACAACAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGACACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTc > 5:380446/1‑139 (MQ=255) aGCGGCCGGCAGAACAACAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTc > 3:81054/1‑139 (MQ=255) cggccggcAGAACAACAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCg > 6:210359/1‑139 (MQ=255) cggccggcAGAACAACAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCg > 8:41918/1‑139 (MQ=255) gccggcAGAACAACAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGc < 8:225436/139‑1 (MQ=255) gccggcAGAACAACAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGc < 8:20458/139‑1 (MQ=255) gccggcAGAACAACAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTAACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGc < 4:542418/139‑1 (MQ=255) gccggcACAACACCACCCGCCAACAATGCGCCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGc < 1:231780/139‑1 (MQ=255) ggcAGAACACCAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCAGTTTTCCGGctct > 6:329438/1‑139 (MQ=255) ggcAGAACAACAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGctct > 2:380837/1‑139 (MQ=255) ggcAGAACAACAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGctct > 6:481130/1‑139 (MQ=255) ggcAGAACAACAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGctcc > 1:336660/1‑138 (MQ=255) cAGAACAACAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCttt < 3:176966/139‑1 (MQ=255) cAGAACAACAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCttt < 7:132661/139‑1 (MQ=255) aacaGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAAc < 4:531408/139‑1 (MQ=255) caGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAAc > 5:64051/1‑137 (MQ=255) ccGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAagag < 8:457966/139‑1 (MQ=255) gcgAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTg < 6:476716/112‑1 (MQ=255) gcgAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTg > 5:476716/1‑112 (MQ=255) gcgAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAgaga > 4:548720/1‑138 (MQ=255) gcgAACAATGCGCCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGaa < 4:268160/139‑1 (MQ=255) aaCAATGCGGCGAAACCGCCCGGTAAACCGCCGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGaaa > 4:569932/1‑137 (MQ=255) tGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGtttt < 4:115747/108‑1 (MQ=255) tGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGtttt > 3:115747/1‑108 (MQ=255) tGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACa < 7:341731/134‑1 (MQ=255) tGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACa > 8:341731/1‑134 (MQ=255) tGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACa < 7:20947/134‑1 (MQ=255) tGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACa > 8:20947/1‑134 (MQ=255) tGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAgg > 5:125483/1‑136 (MQ=255) tGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGgag < 4:74779/139‑1 (MQ=255) tGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGgag < 8:4745/139‑1 (MQ=255) tGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTGTTCCGGCTCTTGCTGCACAAGAGAAACAgg > 8:116077/1‑136 (MQ=255) cgAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGTAgaagaa > 3:436713/1‑139 (MQ=255) cgAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAgaagaa > 6:400570/1‑139 (MQ=255) cgAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAgaagaa > 7:78185/1‑139 (MQ=255) cgAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAgaagaa > 2:16565/1‑139 (MQ=255) cgAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCATGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAgaagaa > 4:540040/1‑139 (MQ=255) aCCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGa < 7:116127/139‑1 (MQ=255) aCCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGa < 1:380837/139‑1 (MQ=255) cGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGaaa < 7:202245/139‑1 (MQ=255) cccGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACg > 8:375755/1‑139 (MQ=255) tAAACCGACTAACAATAAAGCTGACGATACAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGAt < 4:81054/139‑1 (MQ=255) tAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACATGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGAt < 8:520393/139‑1 (MQ=255) accctCAATAAAGCTTACTATAGAAACCCAATTCCTGATCAGATGGTTCCGAGCACTGTCAGCACCGCGGCTGCACCTGTTTTCCGGCTCTTTCTTAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGATACGGGtt < 8:46453/135‑1 (MQ=255) aTCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCAc < 2:148595/73‑1 (MQ=255) aTCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCAc > 1:148595/1‑73 (MQ=255) aTCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTCCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGgag > 1:18261/1‑111 (MQ=255) aaTAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGATACGGGTTTATCaa < 7:41918/139‑1 (MQ=255) aaTAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGATACGGGTTTATCaa < 1:16565/139‑1 (MQ=255) aaTAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGATACGGGTTTATCaa < 3:540040/139‑1 (MQ=255) aaTAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGATACGGGTTTATCa < 7:188619/138‑1 (MQ=255) aaacaGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGTCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGATACGGGTGTATCAat < 7:62192/135‑1 (MQ=255) tAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGATAc < 3:183073/126‑1 (MQ=255) tAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTATCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGATAc > 4:183073/1‑126 (MQ=255) aacccTGACGATAGCAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGATACGGGTTTATCAatga < 1:470154/135‑1 (MQ=255) aaaGCTGACGATAGAAACACCATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCGCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGATACGGGTTTATCAatga < 2:574389/139‑1 (MQ=255) aaGCTGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGATACGGGTTTATCAatga < 3:541236/138‑1 (MQ=255) tGACGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGATACGGGTTTATCAATGATGt > 4:136005/1‑137 (MQ=255) aCGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGGAACAGGGAGAAGAACAGAAACGCTGATACGGGTTTATCAATGATGTTAgg > 8:527965/1‑139 (MQ=255) aCGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACg < 5:322152/111‑1 (MQ=255) aCGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACg > 6:322152/1‑111 (MQ=255) aCGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGATACGGGTTTATCaa < 2:281584/129‑1 (MQ=255) aCGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGATACGGGTTTATCaa > 1:281584/1‑129 (MQ=255) aCGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGATACGGGTTTATCAATGATGTTa < 6:125483/137‑1 (MQ=255) aCGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGATACGGGTTTATCAATGATGTTAgg > 4:276861/1‑139 (MQ=255) aCGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGATACGGGTTTATCAATGATGTTAgg > 7:492429/1‑139 (MQ=255) aCGATAGAAACACAATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGATACGGGTTTATCAATGATGTTAgg > 1:467242/1‑139 (MQ=255) aaaCACAATTCCTGATAAGATGGTTCCGATCTCTGTCAGCACAGCGGCTGCACGTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGATACGGGTTTATCAATGATGTTAGGGATCTGt > 4:559227/1‑139 (MQ=255) acaATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGATACGGGTTTATCAATGATGTTAGGGATCTGTCCgg < 5:400570/139‑1 (MQ=255) catatacTGATAAGATGGTTCCTCTCACTGTCAGCACAGGGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAATATAAACAGGGACAAGAACCGAAACGCTGATACGGGTTTATCATTGATGTTAGTGATCTTTCCGGc < 4:436713/133‑1 (MQ=255) caATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGAt < 7:380148/104‑1 (MQ=255) caATTCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAAAAGGGATAAGAACAGAAACGCTGAt > 8:380148/1‑104 (MQ=255) ttCCTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGATACGGGTTTATCAATGATGTTAGGGATCTGTCCGGCTgg < 6:411372/139‑1 (MQ=255) ccTGATAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGATACGGGTTTATCAATGATGTTAGGGATCTGTCCGGCTGGa > 5:285792/1‑138 (MQ=255) aTAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGATACGGGTTTATCAATGATGTTAGGGATCTGTCCGGCTGGAAAcgc < 3:569932/139‑1 (MQ=255) aTAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGATACGGGTTTATCAATGATGTTAGGGATCTGTCCGGCTGGAAAcgc < 3:462631/139‑1 (MQ=255) aTAAGATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGATACGGGTTTATCAATGATGTTAGGGATCTGTCCGGCTGGAAAcg < 8:492429/138‑1 (MQ=255) gATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGc > 3:474793/1‑47 (MQ=255) gATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGc < 4:474793/47‑1 (MQ=255) gATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGagaag > 5:244009/1‑76 (MQ=255) gATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGagaag < 6:244009/76‑1 (MQ=255) gATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGATACGGGTTTATCaa < 2:483215/104‑1 (MQ=255) gATGGTTCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGATACGGGTTTATCaa > 1:483215/1‑104 (MQ=255) | TAAATAATGATCATTGAGATTGTATTCAGCACAGCGGCCGGCAGAACAACAGCCGCGAACAATGCGGCGAAACCGCCCGGTAAACCGACGATCAATAAAGCTGACGATAGAAACACAATTCCTGATAAGATGGTCCCGATCACTGTCAGCACAGCGGCTGCACCTGTTTTCCGGCTCTTTCTGAACAAGAGAAACAGGGAGAAGAACAGAAACGCTGATACGGGTTTATCAATGATGTTAGGGATCTGTCCGGCTGGAAACGC > BS168_reference_genome/1074701‑1074963 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |