| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | BS168_reference_genome | 2,308,413 | A→G | intergenic (‑74/‑82) | degR ← / → ypzA | activator of degradative enzymes (aprE, nprE, sacB) production or activity/putative spore coat protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 2,308,413 | 0 | A | G | 98.8% | 312.3 / NA | 82 | intergenic (‑74/‑82) | degR/ypzA | activator of degradative enzymes (aprE, nprE, sacB) production or activity/putative spore coat protein |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (52/29); minor base T (0/1); total (52/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCACTGTATATTTCTATAAATGTTTTGTGAAGGATCAACTTCAAGTCTTTATCATCCATAGCTGCGTTCCCCTTCTCTATCAAGATACCTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATATCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAATGAGGATCAGACCGGCTTTACGGATAAGCGGCAGC > BS168_reference_genome/2308281‑2308549 | tCACTGTATATTTCTATAAATGTTTTGTGAAGGATCAACTTCAAGTCTTTATCATCCATAGCTGCGTTCCCCTTCTCTATCAAGATACCTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCt > 3:488961/1‑139 (MQ=255) tGTATATTTCTATAAATGTTTTGTGAAGGATCAACTTCAAGTCTTTATCATCCATAGCTGCGTTCCCCTTCTCTATCAAGATACCTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCttatt > 5:467209/1‑139 (MQ=255) gTATATTTCTATAAATGTTTTGTGAAGGATCAACTTCAAGTCTTTATCATCCATAGCTGCGTTCCCCTTCTCTATCAAGATACCTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCttattt > 4:134919/1‑139 (MQ=255) tataAATGTTTTGTGAAGGATCAACTTCAAGTCTTTATCATCCATAGCTGCGTTCCCCTTCTCTATCAAGATACCTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTtatttttattttat > 6:344951/1‑137 (MQ=255) taAATGTTTTGTGAAGGATCAACTTCAAGTCTTTATCATCCATAGCTGCGTTCCCCTTCTCTATCAAGATACCTCAAATTGTAAAACTGTCCTATTTATTCTCGTTCAATAGTTATGTCGCCTTATTTTTAttttcttt > 7:304179/1‑139 (MQ=255) tttGTGAAGGATCAACTTCAAGTCTTTATCATCCATAGCTGCGTTCCCCTTCTCTATCAAGATACCTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTTTTTTCTTTTATAttt > 1:441453/1‑139 (MQ=255) ttGTGAAGGATCAACTTCAAGTCTTTATCATCCATATCTTCGTTCACAGTCTCTATCAAGATAAATCAAATAGTAAAACGGTCCTATTTATTCTGGTTAAATAGTTATGACGGCATATTTTTATTTTCTTTTCTAtttt > 7:66610/1‑139 (MQ=255) ttGTGAAGGATCAACTTCAAGTCTTTATCATCCATAGCTGCGTTCCCCTTCTCTATCAAGATACCTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTAttt < 5:122440/138‑1 (MQ=255) ttGTGAAGGATCAACTTCAAGTCTTTATCATCCATAGCTGCGTTCCCCTTCTCTATCAAGATACCTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTATAtttt > 7:144385/1‑139 (MQ=255) ttGTGAAGGATCAACTTCAAGTCTTTATCATCCATAGCTGCGTTCCCCTTCTCTATCAAGATACCTCAAATAGTAAAACGGTCCTATTTATGCTGGTTCAATAGTTATGACGGCGTATTTTTATTTTCTTTTATAtttt > 4:338790/1‑139 (MQ=255) ttGTGAAGGATCAACTTCAAGTCTTTATCATACATAGCTGCGTTCCCCTTCTATATCAAGATACCTCAAATTGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGAGTTATTTTTATTTTATTTTCTAtttt > 7:485964/1‑139 (MQ=255) aGTCTTTATCATCCATAGCTGCGTTCCCCTTCTCTATCAAGATACCTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGGTTATTTTTATTTTATTTTATATTTTGGTACAAAAATTTAaaaa > 6:568885/1‑138 (MQ=255) tCTTTATCATCCATAGCTGCGTTCCCCTTCTCTATCAAGATACCTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCaaaaaaa < 4:442833/139‑1 (MQ=255) cTTTATCATACATAGCTGAGTTCCCCTTCTCTATCAAGATACCTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCaaaaaaa < 5:561082/138‑1 (MQ=255) tATCATCCATAGCTGCGTTCCCCTTCTCTATCAAGATACCTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAActct > 2:55560/1‑139 (MQ=255) tATCATCCATAGATGCGTTCCCCGTCTCTATCAAGCTACCTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTTTTTTCTTTTATATTTTGTGTCATAAATTTGaataaaaaact > 2:164465/1‑135 (MQ=255) tcatcCATAGCTGCGTTCCCCTTCTCTATCAAGATACCTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTg < 1:158872/138‑1 (MQ=255) cATAGCTGCGTTCCCCTTCTCTATCAAGATACCTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAaat < 4:146534/139‑1 (MQ=255) aGCTGCGTTCCCCTTCTCTATCAAGATAAATCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTGTATTTTGGTTCATAAATTTCAAATAAACTATGAAAaataat > 7:248510/1‑139 (MQ=255) cGTTCCCCTTCTCTATCAAGATACCTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTtatttttatttt > 3:109709/1‑87 (MQ=255) cGTTCCCCTTCTCTATCAAGATACCTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTtatttttatttt < 4:109709/87‑1 (MQ=255) cGTTCCCCTTCTCTATCAAGATACCTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCgg > 4:526577/1‑139 (MQ=255) cGTTCCCCTTCTCTATCAAGATACCTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCgg > 6:421134/1‑139 (MQ=255) cGTTCCCCTTCTCTATCAAGATACCTCAAATAGTAAAACGGTCCTATTTATTATGGTTCAATAGTTATGACGGCTTATTTTTATTTTATTTTCTATTTTGGTTCAAAAAATTAAAAAAAACTATGCAAAATAATGGCg > 2:545365/1‑138 (MQ=255) ttCCCCTTCTCTATCAAGATACCTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAg > 2:143505/1‑139 (MQ=255) ttCCCCTTCTCTATCAAGATACCTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTATTTTATATTTTTGTACATAAATTTCAAAAAAAATATGCAAAATAATGGCGGAg > 6:350774/1‑139 (MQ=255) ttCCCCTTCTCTATCAAGATACCTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTGCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCGGCAAAAAAATGGCgggg > 6:527962/1‑137 (MQ=255) ttCCCCTTCTCTATCAAGATACCTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTAATTTCTTTTCTATTTTGGTACATAATTTTCAAAAAAACTAGGCAAAATAATGGCGGAg > 8:317942/1‑139 (MQ=255) tATCAAGATACCTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCGTATTTTTATTTTCTTTTGTATTTTTGTACATAAATTTAAAAAAAACTATGCAAAATAATGGCGGAGGTGTTTTTtgt > 1:139128/1‑139 (MQ=255) tCAAGATACCTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTATTTTCTATTTTGGTACATTAATTTCAAAAAAACTCTGAAAAATAATGGCGGAGGTGTTTTTTGTGa > 4:452566/1‑139 (MQ=255) tCAAGATACCTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCGTATTTTTATTTTCTTTTATATTTTTGTACATAAATTTCAAAAAAACTCTGCAAAATAATTGGGGAGGTGTTTTTtgtgt > 1:552611/1‑138 (MQ=255) aGATACCTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACtt < 3:134919/139‑1 (MQ=255) aTACCTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCa < 3:526577/139‑1 (MQ=255) ccTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGaa < 1:143505/139‑1 (MQ=255) ccTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGa < 5:421134/138‑1 (MQ=255) aaaacgaaaaCGGTCCTATTTATTCTGGGTCAATCGTTCTGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCCGCAAAAAAACGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCa < 8:248510/133‑1 (MQ=255) aaTAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCa < 5:121014/139‑1 (MQ=255) tAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATa < 6:411687/139‑1 (MQ=255) tAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGGCGGCTTATTTTTATTTTCTTTTCTATTTTGGTAAATAAATTTCAAAAAAACTCTGCAAAATAATCGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATa < 2:563036/139‑1 (MQ=255) gTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAAt < 6:467209/139‑1 (MQ=255) gTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAAt < 5:350774/139‑1 (MQ=255) gTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAAt < 8:122015/139‑1 (MQ=255) gTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAAt < 8:12504/139‑1 (MQ=255) ttaaaCGTTCTTTTTTATTCTGGTTATATAGTTATTTCGGCTTTTTTTTTTTTTATTTTTTTTTTTGGTTATTAAATTTCTAAAAATCTGTGCAATATATTGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAAt < 2:502020/136‑1 (MQ=255) tAAAACTGTCCTTTTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTTGTACATAAATTTAAAAAAAACTCTGAAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGTATTTCATAAt < 2:133896/138‑1 (MQ=255) tAAAACGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAAt > 6:499823/1‑138 (MQ=255) aaaCGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAATGAg > 4:219530/1‑139 (MQ=255) cccGGTCCTATTTATTCTGGTTCAATAGGCATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAATAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGGGACTTCAGAATTTCATAATGAgg < 1:344265/137‑1 (MQ=255) aCGGTCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAATGAGGa < 6:117095/139‑1 (MQ=255) tCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTTTTTTTATTTTCTTTTGTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAATGCGGATCAg > 4:33316/1‑139 (MQ=255) tCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCaa < 4:324737/87‑1 (MQ=255) tCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCaa > 3:324737/1‑87 (MQ=255) tCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAATGAGGAt > 3:503720/1‑136 (MQ=255) tCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAATGAGGAt > 3:110613/1‑136 (MQ=255) tCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAATGAGGAt > 1:46001/1‑136 (MQ=255) tCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAATGAGGATCAg > 1:44225/1‑139 (MQ=255) tCCTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTATATTTTTGTAAATTAATTTCAAAAAAAATATTCAAAATAATGGCCGAGGTGTTTTTTTTTACTTCATAATTACATAAtgatgag > 1:488458/1‑135 (MQ=255) cTATTTATTCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAATGAGGATCAGAc < 5:568885/139‑1 (MQ=255) tttattCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAATGAGGATCAGACCgg > 1:33767/1‑139 (MQ=255) ttCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAATGAGGATCAGAc > 5:396852/1‑132 (MQ=255) ttCTGGTTCAATAGTTATGTCGGATTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAATGAGGATCAGAc < 6:396852/132‑1 (MQ=255) tCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTGTATTTTGGTTAATTAATTTCAAAAAAACTATGCAAAATAATTGCGGAGGGGTTTTTTGTGACTTCAGAATTTCAAAATGAGGATCAGACCGGCGTTa > 8:534313/1‑139 (MQ=255) tCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTAAGAATTTAATAATGAGGATAAGACCGGCttt > 7:234020/1‑138 (MQ=255) tCTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTATTTTATATTTTTGTACATAAATTTCAAAAAAACTCTGCAAAATATTGGCGGAGGTGTTTTTTGTGACTTAAGAATTTCATAATGAGGATCAGACCGGCttt > 3:109824/1‑138 (MQ=255) tCTGGTTCAATAGTTATGTCGGCATATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCAGCAAAATAATGGCGGAGGTGTTTTTTTTGACTTCAGAATTTCATAATGAGGATCAGACCGGCttaa > 2:7327/1‑137 (MQ=255) tCTGGTTCAATAGTTATGTAGGCTTTTTTTTATTTTCTTGTCTATTTTTGTAATTAAATTTAAAAAAAACTCTGCATAATAATTGCGGAGGTGTTTTTTGTGAATTCAGAATTTCATAATGAGGATCAGAACTGCGTTa > 7:129391/1‑139 (MQ=255) cTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAATGAGGATCAGACCGGCTTTa < 1:565510/138‑1 (MQ=255) cTGGTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGAGGAGGTGTTTTTTGTGACTTCAGAATTTCATAATGAGGATCAGACCGGCTTTAc > 3:503014/1‑139 (MQ=255) gTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAATTAGGATCAGACCGGCTTTACGGa > 3:511432/1‑139 (MQ=255) gTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAATGAGGATCAGAc > 4:347519/1‑127 (MQ=255) gTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAATGAGGATCAGAc < 3:347519/127‑1 (MQ=255) gTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAATGAGGATCAGACCGGCTTTAc < 1:55560/136‑1 (MQ=255) gTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAATGAGGATCAGACCGGCTTTACGGa > 7:146009/1‑139 (MQ=255) gTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAATGAGGATCAGACCGGCTTTACGGa > 7:18470/1‑139 (MQ=255) gTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCAGCAAAAAAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTAAAAAAGAGGATCAGACCGGCATTACGGa > 3:482201/1‑139 (MQ=255) gTTCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTATGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAATGAGGATCAGACCGGCTTTACgg > 6:176909/1‑138 (MQ=255) gTTCAATAGTTATGGCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAATGAGGATCAGACCGGCTTTACGGa < 5:527962/139‑1 (MQ=255) ttCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAATGAGGATCAGACCGGCTTTACGGa > 4:485047/1‑138 (MQ=255) ttCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAATGAGGATCAGACCGGCTTTACGGa > 1:119062/1‑138 (MQ=255) ttCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAATGAGGATCAGACCGGCTTTACGGa > 1:302846/1‑138 (MQ=255) ttCAATAGTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAATGAGGATCAGACCGGCTTTACGGa > 8:84087/1‑138 (MQ=255) gTTATGTCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAATGAGGATCAGACCGGCTTTACGGATAAGCgg < 5:167626/138‑1 (MQ=255) atatCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAATGAGGATCAGACCGGCTTTACGGATAAGCGGCAGc > 4:431486/1‑139 (MQ=255) | TCACTGTATATTTCTATAAATGTTTTGTGAAGGATCAACTTCAAGTCTTTATCATCCATAGCTGCGTTCCCCTTCTCTATCAAGATACCTCAAATAGTAAAACGGTCCTATTTATTCTGGTTCAATAGTTATATCGGCTTATTTTTATTTTCTTTTCTATTTTGGTACATAAATTTCAAAAAAACTCTGCAAAATAATGGCGGAGGTGTTTTTTGTGACTTCAGAATTTCATAATGAGGATCAGACCGGCTTTACGGATAAGCGGCAGC > BS168_reference_genome/2308281‑2308549 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |