| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BS168_reference_genome | 944,586 | T→C | 20.8% | S34P (TCT→CCT) | perR → | transcriptional regulator (Fur family) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 944,586 | 0 | T | C | 20.8% | 672.2 / 224.8 | 347 | S34P (TCT→CCT) | perR | transcriptional regulator (Fur family) |
| Reads supporting (aligned to +/- strand): ref base T (141/133); new base C (35/37); total (176/171) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.93e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.96e-01 | |||||||||||
Only 100 of 352 total aligned reads displayed.
TATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTAAAAGAGCTCACATACGGTGATGCTTCCAGCAG > BS168_reference_genome/944437‑944734 | aaCATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTAt > 1:7468/1‑150 (MQ=255) aaCATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTAt > 2:1818533/1‑150 (MQ=255) aaCATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTAt < 1:3851197/150‑1 (MQ=255) aaCATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTAt > 2:4675660/1‑150 (MQ=255) aCATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATg > 2:1742481/1‑150 (MQ=255) cAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCAt < 2:2460597/150‑1 (MQ=255) aTGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATcc > 1:3141361/1‑150 (MQ=255) tGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCa > 2:398682/1‑150 (MQ=255) tAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAAc > 2:3230091/1‑150 (MQ=255) tAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAAc > 2:4084818/1‑150 (MQ=255) aaGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACa > 2:1155734/1‑150 (MQ=255) aGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCCACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAg < 1:164833/150‑1 (MQ=255) gAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGc > 2:4614897/1‑150 (MQ=255) aTTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCgg > 1:4903291/1‑150 (MQ=255) aTTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGCTAACTCTATGGCTCATCCAACAGCgg > 1:1147193/1‑150 (MQ=255) tttttAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGa < 1:2839979/150‑1 (MQ=255) tttttAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGa > 2:2336695/1‑150 (MQ=255) tttttAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGa < 2:532371/150‑1 (MQ=255) ttttAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAACGGACGat > 1:4073780/1‑150 (MQ=255) ttAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGatat > 2:3736382/1‑150 (MQ=255) tAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGatata < 1:4329831/150‑1 (MQ=255) agaagaGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGatatat > 1:3648577/1‑150 (MQ=255) gaagaGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGatatata < 1:1002089/150‑1 (MQ=255) gaagaGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGatatata > 2:876150/1‑150 (MQ=255) gagagGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAAGCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATaa < 1:2068902/150‑1 (MQ=255) gagGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAg > 1:4024547/1‑150 (MQ=255) gagGTCCATGGCGGATGGATGCACATGTACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAg < 1:525460/150‑1 (MQ=255) agGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGc < 2:474985/150‑1 (MQ=255) ggTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGct < 2:4043551/150‑1 (MQ=255) ggTGCATGACGGATGGCCGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACACTATGGCTCATCCAACAGCGGACGATATATATAAAGct < 1:687487/150‑1 (MQ=255) aTGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGa > 2:2838533/1‑150 (MQ=255) aTGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGCACGATATATATAAAGCTCTGGa > 1:1305522/1‑150 (MQ=255) tGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGaa > 1:4400707/1‑150 (MQ=255) gACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAg > 2:3891924/1‑150 (MQ=255) cGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAggg < 2:1969702/150‑1 (MQ=255) cGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAggg < 1:2460828/150‑1 (MQ=255) aTGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGaaa > 1:4642605/1‑150 (MQ=255) tGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAAt < 1:8113/150‑1 (MQ=255) tGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCCGAGTTCGCATTACTCCTCAACGTCATTCGATTCTGGAATATCTCGGTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAACCTCTGGAAGGGAAAt < 1:3815336/150‑1 (MQ=255) tGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCCACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCGCTGGAAGGGAAAt > 2:1648496/1‑150 (MQ=255) tGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAAt < 2:2404881/150‑1 (MQ=255) ggCTGCACATGAACAAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAAtt < 2:1059327/150‑1 (MQ=255) cTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTc > 1:3110964/1‑150 (MQ=255) tGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTcc < 2:1346907/150‑1 (MQ=255) tGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTcc < 2:3314072/150‑1 (MQ=255) caTGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAAc < 1:1514240/150‑1 (MQ=255) caTGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCACGAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAAc > 1:4747011/1‑150 (MQ=255) tGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACAt < 2:4505981/150‑1 (MQ=255) aaCTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGa > 2:801973/1‑150 (MQ=255) aagaagCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTTAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAg > 1:2990620/1‑150 (MQ=255) agaagCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGc > 1:1268864/1‑150 (MQ=255) agCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGAc < 2:4859298/150‑1 (MQ=255) agCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGAc < 2:1079517/150‑1 (MQ=255) cTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGt < 2:4212851/150‑1 (MQ=255) tAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGtat < 1:3924369/150‑1 (MQ=255) tAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGtat < 1:1742481/150‑1 (MQ=255) gAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGtatat < 1:4502216/150‑1 (MQ=255) aaaCGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGtatata > 2:4947711/1‑150 (MQ=255) tGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAAtt < 2:2625391/150‑1 (MQ=255) aaGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTg < 2:2990723/150‑1 (MQ=255) aGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGc > 2:2124407/1‑150 (MQ=255) aaaCCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCgtg > 1:1779864/1‑150 (MQ=255) aaCCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCgtgt > 1:4481253/1‑150 (MQ=255) aaCCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCgtgt > 2:1146661/1‑150 (MQ=255) ccGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCgtgtgt > 2:5001578/1‑150 (MQ=255) gAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTcc > 1:399794/1‑150 (MQ=255) gAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTcc < 2:632264/150‑1 (MQ=255) gAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACAGTATATAACAATTTGCGTGTGTTcc < 1:4262599/150‑1 (MQ=255) cATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATc < 1:801973/150‑1 (MQ=255) aCTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGt < 2:925707/150‑1 (MQ=255) tcctcAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGttt < 1:2598423/150‑1 (MQ=255) cttcAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTg < 1:3606101/148‑1 (MQ=255) ttcAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTgg > 2:1428577/2‑150 (MQ=255) tcAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGt > 2:156716/1‑150 (MQ=255) naCGNCATGCGATTCTGGAATATCTNGTTAACCCTATGGCTCATCCAACNGCGGACGATNTATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTaa > 1:3476598/2‑150 (MQ=255) aaCGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTaa > 1:2403018/1‑150 (MQ=255) aaCGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTaa < 1:1633840/150‑1 (MQ=255) aaCGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTaa < 2:4291457/150‑1 (MQ=255) aCGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTaaa < 2:3648577/150‑1 (MQ=255) cATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTAAAagag > 1:222858/1‑150 (MQ=255) gATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTAAAAGAGCTcac > 1:4575238/1‑150 (MQ=255) gATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTAAAAGAGCTcac < 1:553176/150‑1 (MQ=255) ttCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTAAAAGAGCTCACAt < 2:7468/150‑1 (MQ=255) ttCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTAAAAGAGCTCACAt > 1:2503829/1‑150 (MQ=255) ttCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTAAAAGAGCTCACAt > 2:3102732/1‑150 (MQ=255) tatCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTAAAAGAGCTCACATACGGTGAt > 1:373055/1‑150 (MQ=255) tatCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGAAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTTGTAAAAGAGCTCACATACGGTGAt > 1:4161803/1‑150 (MQ=255) tctcGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCCGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATCTGCGTGTCTTCCGGGAATCAGGTTTGGTAAAAGAGCTCACATACGGTGATGc > 2:2589527/1‑150 (MQ=255) ctcGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTAAAAGAGCTCACATACGGTGATGCt < 2:3686932/150‑1 (MQ=255) ctcGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTAAAAGAGCTCACATACGGTGATGCt > 1:3339498/1‑150 (MQ=255) ctcGTTAACTCTATGGCTCATCCAACACCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTGCCGGGAATCAGGTTTGGTAAAAGAGCTCACATACGGTGATGCt < 2:3539068/150‑1 (MQ=255) cGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTAAAAGAGCTCACATACGGTGATGCTTc < 1:3230104/150‑1 (MQ=255) cGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTAAAAGAGCTCACATACGGTGATGCTTc < 1:2950059/150‑1 (MQ=255) cGTTAACTCTATGGCTCATCCAACAGCGCACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTAAAAGAGCTCACATACGGTGATGCTTc > 1:4279121/1‑150 (MQ=255) gTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTAAAAGAGCTCACATACGGTGATGCTTcc > 1:2783629/1‑150 (MQ=255) gTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTAAAAGAGCTCACATACGGTGATGCTTcc < 2:4329737/150‑1 (MQ=255) gTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTAAAAGAGCTCACATACGGTGATGCTTcc < 1:93796/150‑1 (MQ=255) gTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTAAAAGAGCTCACATACGGTGATGCTTcc > 2:2204457/1‑150 (MQ=255) tAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTAAAAGAGCTCACATACGGTGATGCTTCcag > 1:1577412/1‑150 (MQ=255) tAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTAAAAGAGCTCACATACGGTGATGCTTCcag < 2:349895/150‑1 (MQ=255) | TATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTAAAAGAGCTCACATACGGTGATGCTTCCAGCAG > BS168_reference_genome/944437‑944734 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |