| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BS168_reference_genome | 1,224,521 | A→G | 36.8% | E356G (GAA→GGA) | oppD → | oligopeptide ABC transporter (ATP‑binding protein) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 1,224,521 | 0 | A | G | 36.8% | 174.3 / inf | 267 | E356G (GAA→GGA) | oppD | oligopeptide ABC transporter (ATP‑binding protein) |
| Reads supporting (aligned to +/- strand): ref base A (81/87); new base G (32/66); total (114/153) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.48e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.63e-01 | |||||||||||
Only 100 of 283 total aligned reads displayed.
GGAGCCGCCAATGTTTAAGGTATCCGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAAGGTGAAACATTAGGGCTGGTTGGTGAATCTGGCTGC > BS168_reference_genome/1224372‑1224670 | gccgccAATGTTTAAGGTATCCGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCCAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTAAGAGAAgg > 1:1697457/1‑149 (MQ=255) ccgccAATGTTTAAGGTATCCGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGtt < 2:4979203/150‑1 (MQ=255) ccgccAATGTTTAAGGTATCCGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGtt < 1:226191/150‑1 (MQ=255) gccAATGTTTAAGGTATCCGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTtga < 2:4229341/150‑1 (MQ=255) cAATCTTTAAGGTATCTGATACTCATTATGTAAAATCGTGCCTCCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGTGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTtgaat < 1:4621306/150‑1 (MQ=255) aaTGTTTAAGGTATCCGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTtgaatg > 2:2717527/1‑150 (MQ=255) aaTGTTTAAGGTATCCGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTtgaatg < 2:1220310/150‑1 (MQ=255) aTGTTTAAGGTATCCGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAATCTGTCTTAGTGAGAGGAGTtgaatga > 1:1454308/1‑150 (MQ=255) tGTTTAAGGTATCCGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTtgaatgaa < 2:2244085/150‑1 (MQ=255) tttAAGGTATCCGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAAtt < 2:3941700/150‑1 (MQ=255) tttAAGGTATCCGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAAtt < 1:2867892/150‑1 (MQ=255) tttAAGGTATCCGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAAtt < 2:4645398/150‑1 (MQ=255) ttAAGGTATCCGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTg > 1:2547623/1‑150 (MQ=255) aaGGTATCCGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGAc > 2:2909581/1‑150 (MQ=255) tATCCGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGaa < 1:3842559/150‑1 (MQ=255) tCCGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAAATGACTGaaaa > 1:5002851/1‑150 (MQ=255) cGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTAAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAAc < 1:1625173/150‑1 (MQ=255) gATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGTGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACt < 1:2125382/150‑1 (MQ=255) tACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTAt < 1:2904482/150‑1 (MQ=255) aCTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTAtt < 2:3247724/150‑1 (MQ=255) cTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTATTa < 1:202953/150‑1 (MQ=255) cATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGa < 2:3895546/150‑1 (MQ=255) aTTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGaa > 2:2150465/1‑150 (MQ=255) aTGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTATTAGAAATc < 1:977542/150‑1 (MQ=255) aTGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATc < 1:3775391/150‑1 (MQ=255) aTGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGAGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATc > 1:2692788/1‑150 (MQ=255) tGTAAAATCGTGGCTGCTTCATCCTGGCGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGAAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCa > 2:1288448/1‑150 (MQ=255) tGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGGCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTATTAGAAATCa > 1:4017290/1‑150 (MQ=255) gTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTATTAGAAATCaa < 1:2909581/150‑1 (MQ=255) aaaTCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACa < 1:466942/150‑1 (MQ=255) aaTCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGNNAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACAt < 1:927667/150‑1 (MQ=255) aaTCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACAt < 2:3790448/150‑1 (MQ=255) tCGTGGCTGCTTCATCCTGACGTGCCAATGGTAGAGCTGCCAGAAGCGGTAACAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGGCTTAGTGAGAGAAGTCGAATGAGTTGACGGAAAAACTATTAGAAATCAAACAttt < 2:3778042/150‑1 (MQ=255) tCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACAttt < 2:1074238/150‑1 (MQ=255) cGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACNTCTCTTAGTNAGAGAAGTTGAATGAATTGACTGNAAAACTATTAGAAATCAAACNtttn < 1:3485673/150‑2 (MQ=255) tGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTaaa > 2:3111619/1‑150 (MQ=255) gctTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGc < 1:181528/150‑1 (MQ=255) ctTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCa < 1:1508950/150‑1 (MQ=255) ttCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCAc < 2:3716187/150‑1 (MQ=255) tCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACt < 1:3161626/150‑1 (MQ=255) aTCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACttt > 2:313607/1‑150 (MQ=255) tGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCa > 2:557330/1‑150 (MQ=255) gACGCGCCAAAGGTAGAGCCGCTTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGCAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAAATATTAGAAATCAAACATTTAAAACAGCACTTTGTCAc > 2:1357097/1‑150 (MQ=255) cgcgCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGc > 2:2484287/1‑150 (MQ=255) gcgcCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGcc < 1:4798070/150‑1 (MQ=255) gcCAAAGGTAGACCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGa < 2:3478635/150‑1 (MQ=255) aaaGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAggg < 2:1042540/150‑1 (MQ=255) aaaGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAggg > 2:4723559/1‑150 (MQ=255) aGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGa > 2:4563488/1‑150 (MQ=255) aGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGa > 1:3263023/1‑150 (MQ=255) ggTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGaa < 2:1960251/150‑1 (MQ=255) gTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAAc < 1:4154757/150‑1 (MQ=255) gTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAAc < 1:4911449/150‑1 (MQ=255) gTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAAc < 2:4114981/150‑1 (MQ=255) gTAGACCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAAc < 2:3512968/150‑1 (MQ=255) agCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGtt > 1:4261952/1‑150 (MQ=255) cgccTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAg > 1:351918/1‑150 (MQ=255) cTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCt < 1:437079/150‑1 (MQ=255) cTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCt < 2:847426/150‑1 (MQ=255) cTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCt > 1:865728/1‑150 (MQ=255) cTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCt < 1:564294/150‑1 (MQ=255) cTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCt < 1:4854819/150‑1 (MQ=255) tGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTg < 1:3055010/150‑1 (MQ=255) tGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAACTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTCTCACGACGACTGTAACGGTTAAGGCtc > 1:4706610/1‑149 (MQ=255) aaGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTa < 1:4533284/150‑1 (MQ=255) aaGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTa < 2:4461008/150‑1 (MQ=255) aaGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTa > 1:3416722/1‑150 (MQ=255) gCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAga < 2:1684143/150‑1 (MQ=255) cGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATATAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAgat > 1:3676452/1‑150 (MQ=255) aaaaGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGAtt > 2:2942514/1‑150 (MQ=255) aaaGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGAttt > 2:2051847/1‑150 (MQ=255) aGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTAt < 1:3869319/150‑1 (MQ=255) cGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCa > 2:349880/1‑150 (MQ=255) cGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCa < 1:742069/150‑1 (MQ=255) aaaTGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCAttt > 1:4276788/1‑150 (MQ=255) gCGTAAACTGGCAAACACGTTTGAAAAAGCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGata < 2:4887426/150‑1 (MQ=255) cGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGatat < 2:2929646/150‑1 (MQ=255) gTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATc > 2:1672832/1‑150 (MQ=255) tAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAAGTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATAACt < 2:3321876/150‑1 (MQ=255) tAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGAGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCt > 2:3464680/1‑150 (MQ=255) aaCTGGCAAACACGTTTGACAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCtat < 1:1202083/150‑1 (MQ=255) aaCTGGCAAACACGTTTGAAAAACCTGTTTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCtat < 1:1247624/150‑1 (MQ=255) aCTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCtata < 2:2547623/150‑1 (MQ=255) cAAACACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAAGGt < 2:1904567/150‑1 (MQ=255) aaaCACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAAGGTg > 2:1234638/1‑150 (MQ=255) aaaCACGTTTGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAAGGTg < 2:51530/150‑1 (MQ=255) aaaCACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAAGGTg > 1:721988/1‑150 (MQ=255) tttGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGTTTTATCATTTGATATCTATAAAGGTGAAACAtt < 1:3109232/150‑1 (MQ=255) tGAAAAACCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAAGGTGAAACATTAg > 2:3584202/1‑150 (MQ=255) gAAAAATCTGTCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAAGGTGAAACATTAgg < 2:1454308/150‑1 (MQ=255) aaaaaCCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAAGGTGAAACATTAggg > 2:1792620/1‑150 (MQ=255) aaaaaCCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAAGGTGAAACATTAggg > 2:4318193/1‑150 (MQ=255) aaaaCCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAAGGTGAAACATTAGGGc > 2:4263517/1‑150 (MQ=255) aCCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAAGGTGAAACATTAGGGCtgg < 1:2490996/150‑1 (MQ=255) tCTTAGTGAGAGGAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAAGGTGAAACATTAGGGCtggttggt < 1:2685613/150‑1 (MQ=255) aGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAAGGTGAAACATTAGGGCTGGTTGGTGAAt > 1:2164051/1‑150 (MQ=255) tGAGAGGAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAAGGTGAAACATTAGGGCTGGTTGGTGAATCt < 1:1364303/150‑1 (MQ=255) gagagaAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGATGGGAAGGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAACGTGAAACATTAGGGCTGATTGGTGAATCtc > 1:2399896/1‑149 (MQ=255) gaggagTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAAGGTGAAACATTAGGGCTGGTTGGTGAATCTGGc > 2:544657/1‑150 (MQ=255) gagaAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAAGGTGAAACATTAGGGCTGGTTGGTGAATCTGGc > 2:1597398/1‑150 (MQ=255) | GGAGCCGCCAATGTTTAAGGTATCCGATACTCATTATGTAAAATCGTGGCTGCTTCATCCTGACGCGCCAAAGGTAGAGCCGCCTGAAGCGGTAAAAGCGAAAATGCGTAAACTGGCAAACACGTTTGAAAAACCTGTCTTAGTGAGAGAAGTTGAATGAATTGACTGAAAAACTATTAGAAATCAAACATTTAAAACAGCACTTTGTCACGCCGAGGGGAACGGTTAAGGCTGTAGATGATTTATCATTTGATATCTATAAAGGTGAAACATTAGGGCTGGTTGGTGAATCTGGCTGC > BS168_reference_genome/1224372‑1224670 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |