| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | Exported | 2,179 | Δ1 bp | 100% | intergenic (–/‑799) | – / → eryR | –//vntifkey=4 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | Exported | 2,179 | 0 | T | . | 99.0% | 54411.0 / inf | 13622 | intergenic (–/‑799) | –/eryR | –//vntifkey=4 |
| Reads supporting (aligned to +/- strand): ref base T (36/51); new base . (5730/7755); total (5781/7841) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.13e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Polymorphic indel expands or contracts a homopolymer stretch. | |||||||||||
Only 100 of 13753 total aligned reads displayed.
CATAAATACCAGGATGTTGTTTCTTTACGTGCTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGATGGTATAAG > Exported/2039‑2313 | ggATGTTGTTTCTTTACGTGCTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCtttttttat > 8:304240/1‑136 (MQ=255) gATGTTGTTTCTTTACGTGCTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGCGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCtttttttat > 7:270633/1‑135 (MQ=255) tttCTTTACGTGCTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCa < 6:413213/139‑1 (MQ=255) tACGTGCTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAAttt < 1:164636/138‑1 (MQ=255) cGTGCTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTtct < 5:111064/138‑1 (MQ=255) gTGCGTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTcc < 6:38115/139‑1 (MQ=255) gCTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGGTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCt < 5:241961/139‑1 (MQ=255) taAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGGTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCAtctc < 5:427846/139‑1 (MQ=255) aaTCCGGGAAACATTTTTACATCGTTAGAAGTGGAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGGTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGt < 2:246094/139‑1 (MQ=255) aaTCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGt < 6:348111/139‑1 (MQ=255) aaTCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGt < 3:390409/139‑1 (MQ=255) aaTCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGt < 5:333839/139‑1 (MQ=255) aaTCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGt < 1:58095/139‑1 (MQ=255) aaTCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGCTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGt < 2:122982/139‑1 (MQ=255) aaTCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTAGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGt < 6:197725/139‑1 (MQ=255) aaTCCGGGAAACATTTTTACATCGGTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGt < 2:214117/139‑1 (MQ=255) aaTCAGGGAATCATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCTAATTTCTCCCTCATCTCGt < 8:33431/139‑1 (MQ=255) cGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑ctct > 3:180335/1‑139 (MQ=255) ggAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGt‑c < 1:133329/134‑1 (MQ=255) ggAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGt > 2:395380/1‑133 (MQ=255) ttACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCtttat > 5:276673/1‑139 (MQ=255) cATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCtttattt < 2:772/138‑1 (MQ=255) cGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGt‑ct > 3:331710/1‑119 (MQ=255) aGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATa < 8:209799/138‑1 (MQ=255) aGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAgg < 8:271110/139‑1 (MQ=255) aGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAgg < 1:288568/139‑1 (MQ=255) aGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGCATATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAgg < 5:305538/139‑1 (MQ=255) gTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTTGT‑CTCTTTATATCTTTATTTTATCATAAAgg < 4:32179/139‑1 (MQ=255) gCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTTTTTTTTCATAAATGatt > 8:364943/1‑137 (MQ=255) caagtcaagtTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑GTCTTTATATCTTTATTTTATGATAAAGGAGTa > 4:13244/1‑139 (MQ=255) caagtcaagtTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTa > 1:257654/1‑139 (MQ=255) gtcaagtTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTAttt > 8:427139/1‑139 (MQ=255) gtTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAAcc > 7:387583/1‑139 (MQ=255) ttATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCg < 1:100272/139‑1 (MQ=255) tataTGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTATTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCg < 7:90964/138‑1 (MQ=255) tGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTcgcg < 2:364399/139‑1 (MQ=255) tGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTcgcg < 3:364448/139‑1 (MQ=255) tGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTcgcg < 2:304499/139‑1 (MQ=255) tGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTcgcg > 7:357528/1‑139 (MQ=255) tGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATATTTATTTTATAATAAAGGAGTATTTGAAACGTcgcg > 6:55305/1‑139 (MQ=255) gTATCTATAATGATTTGTGGTAGTTTAGCCACTACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTcgcg < 3:247006/138‑1 (MQ=255) tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGt > 1:230910/1‑88 (MQ=255) tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATGTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCggg > 1:89981/1‑139 (MQ=255) tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCtttatttta > 3:65403/1‑108 (MQ=255) tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAATGGAGTATTTGATCCGTCGCGCgg > 6:131898/1‑138 (MQ=255) tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAgg < 2:335273/117‑1 (MQ=255) tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAgg < 2:179872/117‑1 (MQ=255) tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTcgcg < 5:170810/135‑1 (MQ=255) tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCggg > 8:156125/1‑139 (MQ=255) tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCggg > 1:352533/1‑139 (MQ=255) tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCggg > 4:353410/1‑139 (MQ=255) tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCggg > 7:6161/1‑139 (MQ=255) cTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTACCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACGGTCGCGCGGGa > 7:152676/1‑139 (MQ=255) tataATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGAc < 6:86979/139‑1 (MQ=255) taATGTTTTGTGGAAGTTTTGCCACCTCAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACAGTCGCGCGGGAc < 8:185302/137‑1 (MQ=255) taATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTATCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGa < 7:417265/136‑1 (MQ=255) taATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCTGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAg > 3:99388/1‑139 (MQ=255) taATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTTCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGAc < 7:118016/137‑1 (MQ=255) taATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGTGa < 2:151152/136‑1 (MQ=255) taATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGAc < 7:180986/137‑1 (MQ=255) taATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAg > 2:272065/1‑139 (MQ=255) taATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGAGCGGGACAg > 6:16558/1‑139 (MQ=255) taATGATTTGTCGAAGTTTTGCCACAACAGTAGGATTATTTACTATC‑TTTTTTTATTAGCCGTCAATTTTCTCCCTCATCTCGT‑CTCTATATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGa < 7:236824/136‑1 (MQ=255) aTGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGt < 1:318689/139‑1 (MQ=255) aTTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTta < 3:275300/86‑1 (MQ=255) aTTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGAc > 3:112364/1‑132 (MQ=255) aTTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGttt < 7:304982/138‑1 (MQ=255) tttGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAgg < 5:364623/107‑1 (MQ=255) ttGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGt > 4:268353/1‑77 (MQ=255) tgtgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGa > 5:201517/1‑128 (MQ=255) tgtgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATAATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGa > 3:213861/1‑139 (MQ=255) tgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGt > 8:237862/1‑74 (MQ=255) tgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTGGTGTTTTTATGTTTTTTTTAGCTTAATGATGATTTTAAACGTTCGGGCGGGACTGtttttgttt > 1:382728/1‑134 (MQ=255) tgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGa > 6:322933/1‑137 (MQ=255) gAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAg < 4:295733/138‑1 (MQ=255) aaGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAggg < 5:138552/139‑1 (MQ=255) aaGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTATTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAggg < 6:265081/139‑1 (MQ=255) ttttTCCACAACAGTTGGTTTCTTTACAATC‑TTTTTTTATTCGCCTTCAAAGTTCTCCCTCATCTCGG‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCTTCTCTCGTGACAGGTTTATGATAGGGata < 8:121248/139‑1 (MQ=255) ttttGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGata > 3:420004/1‑139 (MQ=255) ttGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCtttatttta < 6:296168/86‑1 (MQ=255) gCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGAAAttt > 6:100226/1‑138 (MQ=255) ccACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTa < 1:199086/139‑1 (MQ=255) ccACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTa < 5:399370/139‑1 (MQ=255) ccACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTa < 3:304467/139‑1 (MQ=255) acaGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTGATATTTCTCCGTCATCTGGT‑CTCTTTATATCTTTTTTTTATCTTTATGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGTTTGGGATTTTTTATTgta < 4:411283/139‑3 (MQ=255) acaGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGaa > 4:82644/1‑139 (MQ=255) tgTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAAtt < 1:411281/137‑1 (MQ=255) ggTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAAtt < 4:234569/138‑1 (MQ=255) ggTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTg > 4:201488/1‑139 (MQ=255) gTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCTGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa < 7:330525/139‑1 (MQ=255) gTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa < 7:208819/139‑1 (MQ=255) gTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa < 2:44929/139‑1 (MQ=255) gTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa < 3:14874/139‑1 (MQ=255) gTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa < 4:167632/139‑1 (MQ=255) gTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa < 4:383216/139‑1 (MQ=255) ttatttaCAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTTATg > 8:674/1‑139 (MQ=255) tttaCAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTTTCATAAAGTAGTATTTGAACACTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTTATGTta > 8:399960/1‑139 (MQ=255) tttaCAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa > 4:52753/1‑134 (MQ=255) tttaCAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CGCATTATATATTTATTTTATCATAAATGATTATTTTAAACGTCGCGCGGGCAACGTTTAAGATAGGGATATTTTATTTAATAATTGATTGta > 6:230859/1‑139 (MQ=255) taCAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTg < 5:70659/131‑1 (MQ=255) | CATAAATACCAGGATGTTGTTTCTTTACGTGCTTTATAAATCCGGGAAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGT‑CTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGATGGTATAAG > Exported/2039‑2313 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |