| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BS168_reference_genome | 3,194,626 | T→C | 5.6% | intergenic (‑99/+9) | trnSL‑Ala1 ← / ← uppP | tRNA‑Ala/undecaprenyl‑pyrophosphate phosphatase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 3,194,626 | 0 | T | C | 5.6% | 212.8 / 3.4 | 71 | intergenic (‑99/+9) | trnSL‑Ala1/uppP | tRNA‑Ala/undecaprenyl‑pyrophosphate phosphatase |
| Reads supporting (aligned to +/- strand): ref base T (28/39); new base C (2/2); total (30/41) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.76e-01 | |||||||||||
TGCCAGCGTAGCGCTCTCCCAGCTGAGCTATGGCCCCGTATGTAACGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCAAATGGGACAAGTTTGATTTTGTTAATCAGCCTTAAGAAGAAACGGACGACAAACAGTGCGACCACAAAGGCA > BS168_reference_genome/3194491‑3194758 | tGCCAGCGTAGCGCTCTCCCAGCTGAGCTATGGCCCCGTATGTAACGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTAtttt > 6:202221/1‑139 (MQ=255)tGCCAGCGTAGCGCTCTCCCAGCTGAGCTATGGCCCCGTATGTAACGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAACAGCCTTAtttt > 2:336109/1‑139 (MQ=255) gCCAGCGTAGCGCTCTCCCAGCTGAGCTATGGCCCCGTATGTAACGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTAttttt < 5:330517/139‑1 (MQ=255) ccAGCGTAGCGCTCTCCCAGCTGAGCTATGGCCCCGTATGTAACGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTc > 8:402608/1‑139 (MQ=255) ccAGCGTAGCGCTCTCCCAGCTGAGCTATGGCCCCGTATGTAACGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTc > 4:173009/1‑139 (MQ=255) ccAGCGTAGCGCTCTCCCAGCTGAGCTATGGCCCCGGATGTAACGTCATGTTTATTATTGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTc > 1:268553/1‑139 (MQ=255) gCGTAGCGCTCTCCCAGCTGAGCTATGGCCCCGTATGTAACGTCATGTTTATGATAGATGATTTGATTTTGAAAAACAAGCTGTTTCATCTTTAATTTACAGAAAAAATAAGGCTCTGAAAATCTCCTTATGTTTCTAc > 3:50362/1‑139 (MQ=255) cgcTCTCCCAGCTGAGCTATGGCCCCGTATGTAACGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTAcat > 1:232920/1‑139 (MQ=255) ctctCCCAGCTGAGCTATGGCCCCGTATGTAACGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTAcatca < 8:344876/139‑1 (MQ=255) gCTGAGCTATGGCCCCGTATGTAACGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCaa > 3:226386/1‑138 (MQ=255) gCTGAGCTATGGCCCCGTATGTAACGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCaa > 5:213897/1‑138 (MQ=255) gCTATGGCCCCGTATGTAACGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTa > 5:97123/1‑138 (MQ=255) gCTATGGCCCCGTATGTAACGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTa > 4:166445/1‑138 (MQ=255) gCCCCGTATGTAACGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGGTTACTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTAGACTTACATCATGAGCAAAAGTAAAATcaa > 1:150398/1‑138 (MQ=255) gCCCCGTAAGTAACGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGAAAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATcac < 5:267812/139‑1 (MQ=255) ccccGTATGTAACGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATcaca < 2:232920/139‑1 (MQ=255) accGTATGTAACGTCATGTTTATTATATATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAACTAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCacac < 8:31613/138‑1 (MQ=255) ccGTTTGTAACGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACAcc > 1:153234/1‑139 (MQ=255) ccGTATGTAACGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACAcc < 4:254204/139‑1 (MQ=255) ccGTATGTAACGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACAcc < 8:273574/139‑1 (MQ=255) ccGTATGTAACGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACAcc < 8:183124/139‑1 (MQ=255) ccGTATGTAACGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACAcc < 7:402608/139‑1 (MQ=255) ccGGATGTAAAGTAATGTTAATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACAcc < 4:248866/139‑1 (MQ=255) gTATGTAACGTGATGTTTATTATAGATGATTTTATTTTTAAAAAAAAGCTTTTTACTATTGAATTTACATAAAAAATAATGCTCGGAAAAGAGCCTTATTTTTAGACTTACATCATGATCAAAAGTAAAATCACAcc > 1:268861/1‑137 (MQ=255) tATGTAACGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAATGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCgag < 2:50106/139‑1 (MQ=255) tATGTAACGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCgag < 7:324728/139‑1 (MQ=255) tATGTAACGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCgag < 3:223531/139‑1 (MQ=255) tGTAACGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGaa < 4:148540/139‑1 (MQ=255) tGTAACGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGaa < 5:73203/139‑1 (MQ=255) tGTAACGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGaa < 3:173009/139‑1 (MQ=255) tGTAACGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGaa < 3:128436/139‑1 (MQ=255) cGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAGTCCCACCGAGAATAAtt > 1:306298/1‑139 (MQ=255) cGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGaataat > 1:311650/1‑138 (MQ=255) cGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAAtt > 7:8507/1‑139 (MQ=255) cATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTTTTGAATTGACAGAAAAAATAATGCTAGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCg > 7:223859/1‑138 (MQ=255) cATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGa > 1:176794/1‑139 (MQ=255) tGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGa > 3:178787/1‑137 (MQ=255) tGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATa < 6:97123/139‑1 (MQ=255) taGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCaaa > 2:122280/1‑139 (MQ=255) atgatTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCAAATgg > 8:378208/1‑139 (MQ=255) atgatTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATAATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCAAATgg > 7:134203/1‑139 (MQ=255) atgatTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTACTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGaa < 2:151301/117‑1 (MQ=255) atgatTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTACTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGaa < 2:157112/117‑1 (MQ=255) atgatTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTACTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGaa > 1:157112/1‑117 (MQ=255) atgatTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTACTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGaa > 1:151301/1‑117 (MQ=255) gatTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCAAATGGGa > 6:303557/1‑139 (MQ=255) attttattttGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCAAATGGGa > 5:185890/1‑138 (MQ=255) ttttattttGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCAAATGGGAc > 1:94223/1‑138 (MQ=255) tttattttGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCAAATGGGAc > 8:81990/1‑137 (MQ=255) tattttGAAAAACAATGTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCAAATGGGACAAg < 3:76692/138‑1 (MQ=255) tgCTGTTTCCTCTTGAATTGACAGAAAAAATAACGCTCGGAAAAGATCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCAAATGGGACAAGTTTGATTTTGTTAAt < 8:139782/138‑1 (MQ=255) aGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAATAGCCTTATTTTTCGACTTACATCATGATCAAAACTAAAATCACACCGAGAATAATTCGATAGAATGCAAATGGGACAAGTTTGATTTTGTTAAt < 2:268553/139‑1 (MQ=255) aGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCAAATGGGACAAGTTTGATTTTGTTAAt < 6:185890/139‑1 (MQ=255) aGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCAAATGGGACAAGTTTGATTTTGTTAAt < 4:175308/139‑1 (MQ=255) aGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCAAATGGGACAAGTTTGATTTTGTTAAt < 7:378208/139‑1 (MQ=255) ccTCTTGAATTGACAGAAAAAATAAGGCTCGTAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCAAATGGGACAAGTTTGATTTTGTTAATCAGCCtt < 7:203191/138‑1 (MQ=255) ttGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCAAATGGGACAAGTTTGATTTTGTTAATCAGCCTTAAGAAGAAAc > 8:406313/1‑139 (MQ=255) ttGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCAAATGGGACAAGTTTGATTTTGTTAATCAGCCTTAAGAAGAAAc > 3:235022/1‑139 (MQ=255) aCAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCAAATGGGACAAGTTTGATTTTGTTAATCAGCCTTAAGAAGAAACgg < 2:277786/138‑1 (MQ=255) aCAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCAAATGGGACAAGTTTGATTTTGTTAATCAGCCTTAAGAAGAAACgg < 1:8864/138‑1 (MQ=255) aGAAAAAATAAGGCTCGTAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCaaa < 6:422646/93‑1 (MQ=255) aGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCaaa > 5:422646/1‑93 (MQ=255) aaaaaTAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCAAATGGGACAAGTTTGATTTTGTTAATCAGCCTTAAGAAGAAACGGACGACa < 7:406313/139‑1 (MQ=255) aaaaaTAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCAAATGGGACAAGTTTGATTTTGTTAATCAGCCTTAAGAAGAAACGGACGACa < 2:32877/139‑1 (MQ=255) aaaaaTAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCAAATGGGACAAGTTTGATTTTGTTAATCAGCCTTAAGAAGAAACGGACGACa < 4:377030/139‑1 (MQ=255) ggCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCAAATGGGACAAGTTTGATTTTGTTAATCAGCCTTACGAAGAAACGGACGACAAACAGTGc < 2:153234/139‑1 (MQ=255) gCTCGGAAAAGATCCTTATTTTTCGACTTAGATCATGATCAAAATTAAAATCACACAGAGAATAATTCGATAGATTGCAAATGGGACAAGTTTGATTTTGTTAATCAGCCTTAAGAAGAAACGGACGACAAACAGTGCg < 1:336109/139‑1 (MQ=255) ggAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCAAATGGGACAAGTTTGATTTTGTTAATCAGCCTTAAGAAGAAACGGACGACAAACAGTGCGAc < 4:316448/137‑1 (MQ=255) aaaaGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCAAATGGGTCAAGTTTGATTTTGTTAATCAGCCTTAAGAAGAAACGGACGACAAACAGTGCGACcaca < 3:30463/139‑1 (MQ=255) aaaaGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCAAATGGGACAAGTTTGATTTTGTTAATCAGCCTTAAGAAGAAACGGACGACAAACAGTGCGACcaca < 5:335831/139‑1 (MQ=255) gCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCAAATGGGACAAGTTTGATTTTGTTAATCAGCCTTAAGAAGAAACGGACGACAAACAGTGCGACCACAAAGGca < 2:94223/139‑1 (MQ=255) gCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCAAATGGGACAAGTTTGATTTTGTTAATCAGCCTTAAGAAGAAACGGACGACAAACAGTGCGACCACAAAGGca < 4:178787/139‑1 (MQ=255) gCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCAAATGGGACAAGTTTGATTTTGTTAATCAGCCTTAAGAAGAAACGGACGACAAACAGTGCGACCACAAAGGca < 4:300496/139‑1 (MQ=255) gCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCAAATGGGACAAGTTTGATTTTGTTAATCAGCCTTAAGAAGAAACGGACGACAAACAGTGCGACCACAAAGGca < 1:122280/139‑1 (MQ=255) | TGCCAGCGTAGCGCTCTCCCAGCTGAGCTATGGCCCCGTATGTAACGTCATGTTTATTATAGATGATTTTATTTTGAAAAACAAGCTGTTTCCTCTTGAATTGACAGAAAAAATAAGGCTCGGAAAAGAGCCTTATTTTTCGACTTACATCATGATCAAAAGTAAAATCACACCGAGAATAATTCGATAGATTGCAAATGGGACAAGTTTGATTTTGTTAATCAGCCTTAAGAAGAAACGGACGACAAACAGTGCGACCACAAAGGCA > BS168_reference_genome/3194491‑3194758 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |