| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BS168_reference_genome | 3,831,264 | C→T | 5.3% | N168N (AAC→AAT) | ywiC → | putative integral inner membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 3,831,264 | 0 | C | T | 5.3% | 255.6 / 3.1 | 75 | N168N (AAC→AAT) | ywiC | putative integral inner membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (24/47); new base T (2/2); total (26/49) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.06e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.47e-01 | |||||||||||
GTTCGGGCGGGTTTGCGAGCTGCTGGCTGGGGATGGGAACCCTTGACGGCTGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATCCGCTCTTTTCGGAGCAGGATGGGCGTTTCTCGCTTTTATCCCGAGCAGCTTGCGGGCATGGTTTTTTCATGGAAGGGATTGGCC > BS168_reference_genome/3831128‑3831401 | gTTCGGGCGGGTTTGCGAGCTGCTGGCTGGGGATGGGAACCCTTGACGGCTGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAg < 6:268527/139‑1 (MQ=255) tggggcgggGATGCGAGCGGCTGTCTGGGGAGGGGAACCCTGGACGGCGGGGCGTGGTTTATTTTCTTGCAGTCAGCATTATTTTTTATCGGGAGGTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAggg < 8:408835/137‑1 (MQ=255) tCGGGCGGGTTTGCGAGCTGCTGGCTGGGGATGGGAACCCTTGACGGCTGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAggg < 6:348373/139‑1 (MQ=255) ggggcgggGTTGCGAGCTGGTGGGTGGGGAGGGGAACCCTTGACGGCTGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGTGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAggg < 6:395242/137‑1 (MQ=255) cgggggggTTTGCGAGCTGCTGGCTGGGGATGGGAACCCTTGACGGCTGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAggg < 7:244776/138‑1 (MQ=255) cgggcgggTTTGCGAGCTGCTGGCTGGGGATGGGAACCCTTGACGGCTGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAggg > 2:149976/1‑138 (MQ=255) cgggcgggTTTGCGAGCTGCTGGCTGGGGATGGGAACCCTTGACGGCTGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAggg < 7:1588/138‑1 (MQ=255) cgggcgggTTTGCGAGCTGCTGGCTGGGGATGGGAACCCTTGACGGCTGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAggg < 6:422500/138‑1 (MQ=255) cgggcgggTTTGCGAGCTGCTGGCTGGGGAGGGGAACCCTTGACGGCTGGGCGTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGGGATCCGCGAGAGAAAAAACAggg < 8:49240/138‑1 (MQ=255) cgggTTTGCGAGCTGCTGGCTGGGGATGGGAACCCTTGACGGCTGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCAttt < 8:225869/139‑1 (MQ=255) tttGCGAGCTGCTGGCTGGGGATGGGAACCCTTGACGGCTGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCAt < 4:401347/139‑1 (MQ=255) ttGCGAGCTGCTGGCTGGGGATGGGAACCCTTGACGGCTGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGTTCCGCGAGAGAAAAAACAGGGCATTTGCATa < 8:394194/139‑1 (MQ=255) tGCGAGCTGCTGGCTGGGGATGGGAACCCTTGACGGCTGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATa < 2:82089/138‑1 (MQ=255) gCGAGCTGCTGGCTGGGGCTGGGAACCCTTGACGGCTGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATAc < 3:240792/138‑1 (MQ=255) gCGAGCTGCTGGCTGGGGATGGGAACCCTTGACGGCTGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATAc < 1:145916/138‑1 (MQ=255) cgcgcggctggcggGGGACGGGAACCCGTGACGGCTGCGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTg < 8:231796/133‑1 (MQ=255) gctggctgGGGATGGGAACCCTTGACGGCTGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATg < 1:149976/139‑1 (MQ=255) ctggctggGGATGGGAACCCTTGACGGCTGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCAt < 7:125468/137‑1 (MQ=255) ggctggGGTTGGGAACCCTTGACGGCTGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATgggg < 5:104304/139‑1 (MQ=255) gcgggggTTGGGATCCCTTGACGGCTGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATgtgg < 3:323865/135‑1 (MQ=255) aTGGGAACCCTTGACGGCTGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCAcc > 8:285815/1‑139 (MQ=255) ggAACCCTTGACGGCTGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAATAGGGCATTTGCATACTGGTCATGGGGATATCACctgc > 3:376391/1‑139 (MQ=255) ggAACCCTTGACGGCTGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAATAGGGCATTTGCATACTGGTCATGGGGATATCACctgc > 1:321416/1‑139 (MQ=255) ggAACCCTTGACGGCTGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGt < 3:309909/121‑1 (MQ=255) ggAACCCTTGACGGCTGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGt > 4:309909/1‑121 (MQ=255) ggAACCCTTGACGGCTGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACctgc > 7:12090/1‑139 (MQ=255) ggAACCCTTGACGGCTGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTGTTATGTGAAATCGGTGATCCGCGAGAGTAAACACAGGGCTTGTGCATACGGGTCAGGGGGAGATCACctgc > 5:245113/1‑139 (MQ=255) ccTTGCAGGCTGGGCGTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTc < 4:300932/139‑1 (MQ=255) ccTTGACGGCTGGGCTTGGTGTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTc < 1:276372/139‑1 (MQ=255) cTTGACGGCTGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATAc > 1:176292/1‑111 (MQ=255) cTTGACGGCTGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATAc < 2:176292/111‑1 (MQ=255) ggCTGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCtttt > 4:365476/1‑139 (MQ=255) tGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAggg < 8:305891/91‑1 (MQ=255) tGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAggg > 7:311686/1‑91 (MQ=255) tGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAggg > 7:305891/1‑91 (MQ=255) tGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAggg < 8:311686/91‑1 (MQ=255) tGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATg > 2:257092/1‑110 (MQ=255) tGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATg < 1:257092/110‑1 (MQ=255) ggCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATcc > 4:135491/1‑139 (MQ=255) ttGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATCCGct < 8:12090/139‑1 (MQ=255) ttGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATCCGct < 3:237182/139‑1 (MQ=255) ggTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCAt < 4:422277/87‑1 (MQ=255) ggTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCAt > 3:422277/1‑87 (MQ=255) ggTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATCCGct < 3:198602/137‑1 (MQ=255) ggTTTATTTTCTTGCAGTCTGCTTTATATTTTCTCGGGACGTCCTTTTATGTGAACTCGGGGATCCTCGAGAGAAAAAACAGGGCATTTGCATACTGGGCATTGGGATATCACCTGCTGCTCCCCTTTTTATCCGct < 6:50796/137‑1 (MQ=255) ttttCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATcc > 5:223831/1‑128 (MQ=255) ttttCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATcc < 6:223831/128‑1 (MQ=255) tCTTGCAGTCTGCTTTATTTTTTCTCGGGAGTTCCTTTTATGTGAACTCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATCCGCTCTTTTCGGAg < 3:158080/138‑1 (MQ=255) tCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATCCGCTCTTTTCGGAg < 4:77763/138‑1 (MQ=255) ttGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATa < 8:321424/83‑1 (MQ=255) ttGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATa > 7:321424/1‑83 (MQ=255) cAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATCCGCTCTTTTCGGAGCAGGa < 8:231671/138‑1 (MQ=255) gTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATCCGCTCTTTTCGGAGCAGGATgg > 5:299346/1‑139 (MQ=255) cTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATCCGCTCTTTTCGGAGCAGGATGGGCGtt > 3:187455/1‑139 (MQ=255) aTTTTTTATCTGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATCCGCTCTTTTCGGAGCAGGATGGGCGTTtct < 3:365476/138‑1 (MQ=255) aTTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATCCGCTCTTTTCGGAGCAGGATGGGCGTTtct < 4:187455/138‑1 (MQ=255) tttATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATCCGCTCTTTTCGGAg < 5:159713/118‑1 (MQ=255) tttATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATCCGCTCTTTTCGGAg > 6:159713/1‑118 (MQ=255) ttATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAATAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATCCGCTCTTTTCGGAGCAGGATGGGCGTTTCTCGCtt < 2:321416/138‑1 (MQ=255) ttATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAATAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATCCGCTCTTTTCGGAGCAGGATGGGCGTTTCTCGCtt < 4:376391/138‑1 (MQ=255) tATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATCCGCTCTTTTCGGAg < 6:173378/116‑1 (MQ=255) tATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATCCGCTCTTTTCGGAg > 5:173378/1‑116 (MQ=255) tATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATCCGCTCTTTTCGGAGCAGGATGGGCGTTTCTCGCttt > 5:421042/1‑138 (MQ=255) tATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATCCGCTCTTTTCGGAGCAGGATGGGCGTTTCTCGCttt > 5:81185/1‑138 (MQ=255) gTTCCTTTTATGTGAAATCGGCGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATCCGCTCTTTTCGGAGCAGGATGGGCGTTTCTCGCTTTTATCCCGag < 7:173888/139‑1 (MQ=255) tATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGATCCCCTTTTTATCCGCTATTTTCGGAGCAGGATGGGCGTTTCTCGCTTTTATCCAGAGCAGCTTGc > 7:340633/1‑139 (MQ=255) aTGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATCCGCTCTTTTCGGAGCAGGATGGGCGTTTCTCGCTTTTATCCCGAGCAGCTTGCg > 6:364664/1‑139 (MQ=255) gtgAAATCTGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATCCGCTCTTTTCGGATCAGGATGGGCGTTTCTCGCATTTATCCCGCGCAGCTGGCggg > 3:64270/1‑139 (MQ=255) gtgAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATCCGCTCTTTTCGGAGCAGGATGGGCGTTTCTCGCTTTTATCCCGAGCAGCTTGCggg > 3:24269/1‑139 (MQ=255) tgAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATCCGCTCTTTTCGGAGCAGGATGGGCGTTTCTCGCTTTTATCCCGAGCAGCTTGCGGGc < 3:419003/139‑1 (MQ=255) tCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATCCGCTCTTTTCGGAGCAGGATGGGCGTTTCTCGCTTTTATCCCGAGCAGCTTGCGGGCATGGTTTTTTCa < 6:10406/139‑1 (MQ=255) cgAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATCCGCTCTTTTCGGAGCAGGATGGGCGTTTCTCGCTTTTATCCCGAGCAGCTTGCGGGCATGGTTTTTTCATGGa < 7:175832/139‑1 (MQ=255) cgAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATCCGCTCTTTTCGGAGCAGGATGGGCGTTTCTCGCTTTTATCCCGAGCAGCTTGCGGGCATGGTTTTTTCATGGa < 3:135491/139‑1 (MQ=255) aaCAGGGCATTGGCATTCAGGTCCTGAGGATATCACCTGCTGCTCCCCTTTTTATGCGCGCTTTTCGGAGCAGGATGGGCGTTTCTCGCTTTTATCCCGAGCAGCTTGCGGGCATGGTTTTTTCATGGAAGGGATTGGc < 6:282181/139‑1 (MQ=255) aCAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATCCGCTCTTTTCGGAGCAGGATGGGCGTTTCTCGCTTTTATCCCGAGCAGCTTGCGGGCATGGTTTTTTCATGGAAGGGATTGGcc < 6:81185/139‑1 (MQ=255) | GTTCGGGCGGGTTTGCGAGCTGCTGGCTGGGGATGGGAACCCTTGACGGCTGGGCTTGGTTTATTTTCTTGCAGTCTGCTTTATTTTTTATCGGGAGTTCCTTTTATGTGAAATCGGTGATCCGCGAGAGAAAAAACAGGGCATTTGCATACTGGTCATGGGGATATCACCTGCTGCTCCCCTTTTTATCCGCTCTTTTCGGAGCAGGATGGGCGTTTCTCGCTTTTATCCCGAGCAGCTTGCGGGCATGGTTTTTTCATGGAAGGGATTGGCC > BS168_reference_genome/3831128‑3831401 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |