| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | BS168_reference_genome | 944,551 | C→T | P22L (CCT→CTT) | perR → | transcriptional regulator (Fur family) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 944,551 | 0 | C | T | 99.2% | 438.6 / ‑4.2 | 124 | P22L (CCT→CTT) | perR | transcriptional regulator (Fur family) |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (46/77); total (47/77) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.52e-01 | |||||||||||
Only 100 of 124 total aligned reads displayed.
AAAGAGTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAAC > BS168_reference_genome/944421‑944669 | aaaGAGTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGt > 1:85367/1‑138 (MQ=255) gagTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATg < 5:75788/139‑1 (MQ=255) gagTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATg < 2:15739/139‑1 (MQ=255) gagTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATg < 6:86186/139‑1 (MQ=255) agTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGc > 4:320222/1‑139 (MQ=255) tACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATg < 8:315535/135‑1 (MQ=255) acTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCt > 6:161604/1‑139 (MQ=255) aTTATAAACATTACAATGTAAGAATTTTTTTTAGAATAGAGGTGCATGACGGATCGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGa > 2:273061/1‑138 (MQ=255) ttATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAat < 3:320222/139‑1 (MQ=255) ttATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAat < 3:303193/139‑1 (MQ=255) ataAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGaa > 7:357012/1‑136 (MQ=255) ataAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGaa > 7:64179/1‑136 (MQ=255) taAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGaa < 7:205479/135‑1 (MQ=255) taAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGaa < 7:152385/135‑1 (MQ=255) taAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGaa < 8:260129/135‑1 (MQ=255) taAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGaa < 8:357012/135‑1 (MQ=255) aTTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATAtctc < 8:79880/136‑1 (MQ=255) aTTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGtt < 4:69027/139‑1 (MQ=255) aTTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGtt < 6:256313/139‑1 (MQ=255) aTTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGtt < 3:14431/139‑1 (MQ=255) aTTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGtt < 4:98503/139‑1 (MQ=255) aTTACAAAGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGAGTCACATGTACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTAGTCTTCAACGTCATGCGATTCTGTAATATCTCGtt < 2:162431/139‑1 (MQ=255) tACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTaa > 6:237610/1‑139 (MQ=255) tACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTaa > 4:315157/1‑139 (MQ=255) tACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTaa > 3:284200/1‑139 (MQ=255) tACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTa > 5:378778/1‑138 (MQ=255) aCAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTaa < 1:311374/138‑1 (MQ=255) aCAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAAc > 3:35319/1‑139 (MQ=255) cAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGtt > 7:22281/1‑135 (MQ=255) aaTGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTa > 7:249110/1‑135 (MQ=255) tGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGACACAGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTa > 1:162431/1‑139 (MQ=255) tGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGtt > 3:240200/1‑132 (MQ=255) tGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGtt < 4:240200/132‑1 (MQ=255) aGAATTTTTTTTAGAAGAGAGGTGCATGACTGATGGATGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAATGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTatat < 8:143526/136‑1 (MQ=255) aGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGc < 6:202102/139‑1 (MQ=255) aGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACAGGAACTAAAAGACGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTAGTTAACTatat > 7:143526/1‑136 (MQ=255) gAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTc < 7:294507/104‑1 (MQ=255) gAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTc > 8:294507/1‑104 (MQ=255) atttttttAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCa < 6:336810/137‑1 (MQ=255) ttttttAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATc > 4:75513/1‑138 (MQ=255) agaagaGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGc > 5:71187/1‑127 (MQ=255) agaagaGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGc < 6:71187/127‑1 (MQ=255) agaagaGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCaa < 8:161452/135‑1 (MQ=255) gaagaGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACa < 8:249110/136‑1 (MQ=255) aagaGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCgg < 4:244393/139‑1 (MQ=255) agagagGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGa < 1:106329/139‑1 (MQ=255) agagagGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGa < 5:263175/139‑1 (MQ=255) gagGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGa < 3:324025/139‑1 (MQ=255) atgggCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGat < 2:191724/135‑1 (MQ=255) agGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATGTCGTTAACTCTATGGCTCATCCAACAGCGGACGat < 2:59338/139‑1 (MQ=255) agGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGAc < 8:64179/136‑1 (MQ=255) agGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGAc < 7:156889/136‑1 (MQ=255) agGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGat < 3:181715/139‑1 (MQ=255) agGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGat < 6:187272/139‑1 (MQ=255) agGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGat < 3:75513/139‑1 (MQ=255) agGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGat < 5:161604/139‑1 (MQ=255) agGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATAGCTCATCCAACAGCGGACGat < 1:98931/139‑1 (MQ=255) agGTGCATGACGGATCGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGat < 1:273061/139‑1 (MQ=255) cATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATg > 4:78438/1‑84 (MQ=255) cATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATg < 3:78438/84‑1 (MQ=255) cATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGat > 3:303089/1‑134 (MQ=255) cGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAACCCGTATTTCGCATTACTCTTAAACGTCATGCGATTCTTGAATATCTCGTTAACTCTATGGCTCATCCATCAGCGGACTATATATATAAAg < 6:206724/139‑1 (MQ=255) cGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAg > 6:188429/1‑139 (MQ=255) cGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAg < 5:237610/139‑1 (MQ=255) aTGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGat > 2:294839/1‑126 (MQ=255) aTGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGat < 1:294839/126‑1 (MQ=255) aTGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGctc > 2:380127/1‑139 (MQ=255) gCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGctc > 7:371553/1‑136 (MQ=255) cacaTGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATg < 2:61046/69‑1 (MQ=255) cacaTGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATg > 1:61046/1‑69 (MQ=255) cacaTGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAat < 1:327912/81‑1 (MQ=255) cacaTGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAgg > 4:143605/1‑139 (MQ=255) acaTGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGAATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATCGCTCATCCAACAGCGGACGATATATATAAAGCTCTgg > 8:296410/1‑134 (MQ=255) aTGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGaa < 3:143605/139‑1 (MQ=255) cTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAAt > 8:342778/1‑136 (MQ=255) aaaaGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTcc > 4:380573/1‑138 (MQ=255) aaaaGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCt < 4:342132/139‑1 (MQ=255) gCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGtt > 1:268156/1‑72 (MQ=255) gCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGtt < 2:268156/72‑1 (MQ=255) gCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGat > 2:238162/1‑102 (MQ=255) gCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGat < 1:238162/102‑1 (MQ=255) tAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGc < 3:211072/79‑1 (MQ=255) tAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGc > 4:211072/1‑79 (MQ=255) gAAACGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAg < 1:328592/139‑1 (MQ=255) aaaCGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTAt > 7:26896/1‑73 (MQ=255) aggTTGAAGGAAACCGGAGTTCGAATTACTATTAAACGTCATGCGATTTTGTAATATCTCTTTACCTCTATGGCGCATCCAACAGCGTACTATTTATATAAAGCTCTGGAAGGCAAATTTCCTAACTTGTGCGTAg < 8:22281/134‑1 (MQ=255) aCGTTTAAGGAACCCGGAGGTCGCATTACTCTTCAACGTAATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGCAGGGAAATTTCCTAACATGAGCGTAg < 8:371553/136‑1 (MQ=255) aCGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGa < 1:380127/139‑1 (MQ=255) aCGTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGa < 2:85367/139‑1 (MQ=255) aCGTGGAAGGAAACCGGAGTTCGCAGTACTCTTCATCGTCATGCGTTTCTGGAATATCTCGTTAAGTCTATGGCTCATCCAACAGCGGACTTTATAAATAAAGCTCTGTAAGGGAAATTTCCTAACATGAGCGTAg < 7:296410/136‑1 (MQ=255) gTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACg < 4:284200/139‑1 (MQ=255) gTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACg > 3:340684/1‑139 (MQ=255) gTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACg < 4:327783/139‑1 (MQ=255) gTTGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACg < 3:315157/139‑1 (MQ=255) ttGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACTGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACgg > 1:373452/1‑139 (MQ=255) ttGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACg < 5:215251/138‑1 (MQ=255) ttGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACg > 6:215251/1‑138 (MQ=255) tGAAGGAAACCGGAGTTCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGATAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACg < 3:134590/137‑1 (MQ=255) ttCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGat > 6:299478/1‑74 (MQ=255) ttCGCATTACTCTTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGat < 5:299478/74‑1 (MQ=255) | AAAGAGTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAAC > BS168_reference_genome/944421‑944669 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |