BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	Exported	2,224	T→C	15.1%	intergenic (–/‑754)	– / → eryR	–//vntifkey=4

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	Exported	2,224	0	T	C	15.1%	23102.9 / inf	9328	intergenic (–/‑754)	–/eryR	–//vntifkey=4
Reads supporting (aligned to +/- strand): ref base T (3170/4703); new base C (552/852); total (3752/5576)
Fisher's exact test for biased strand distribution p-value = 5.16e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 9544 total aligned reads displayed.

AAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGATGGTATAAGGGACTTTCATGCTTGGAAAGTGGGGATTATGAATTAGATGCTTGTCCA  >  Exported/2085‑2361

         tACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTACATCttta                                                                                                                                    <  8:32734/138‑1 (MQ=255)

          aCATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCtttatt                                                                                                                                  <  6:229386/138‑1 (MQ=255)

           cATCGTTAGTATTGGAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGGCACTACAGTTGGGTTTTTTAGTATCTTTTTTTTATTAGCCGTCAAATTTGTCGCTCATCTCGTCTCTTTATATGtttattt                                                                                                                                 <  5:192514/139‑1 (MQ=255)

            aTCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCtttatttta                                                                                                                               <  1:195329/139‑1 (MQ=255)

             tCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCtttatttta                                                                                                                               <  2:235124/139‑1 (MQ=255)

              cGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCtttatttta                                                                                                                               >  4:269549/1‑138 (MQ=255)

                ttAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGATGTTTTGCCACATCAGTTGGTTTATTTACAATCTTTTTTTTATTTGCCGTCAAATTTCTCCCTCATATCGTCTCTTTATATCTTTATTTTAtcg                                                                                                                            >  5:21332‑M2/3‑138 (MQ=255)

                ttAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCa                                                                                                                            >  4:187429‑M2/3‑139 (MQ=255)

                ttAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCAACAACAGTTGGTTGATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCa                                                                                                                            >  2:172325‑M2/3‑139 (MQ=255)

                ttAGAAGTGCAAGTCAAGTTAAATGTATCTATAATGATTTCTGGAAGTTTTGCCACAACAGTGGGTTTAGTTACAATCTTTTTTATATTAGCCGGCAAATTTCTCCCTCATCTCGTCTCTTTACATCTTTATTTTATCa                                                                                                                            >  5:235603/1‑139 (MQ=255)

                  aGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATa                                                                                                                          <  5:105519/138‑1 (MQ=255)

                   gAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTACATCTTTATTTTATCATa                                                                                                                          <  7:201764/138‑1 (MQ=255)

                      gTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTACATCTTTATTTTATCATAAAgg                                                                                                                      <  2:122362/139‑1 (MQ=255)

                      gTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGa                                                                                                                     >  1:175567/1‑139 (MQ=255)

                         caagtcaagtTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCtttattt                                                                                                                                 <  8:262389/125‑1 (MQ=255)

                         caagtcaagtTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTACATCTTTATTTTATCATAAAGGAg                                                                                                                    >  8:241214/1‑138 (MQ=255)

                         caagtcaagtTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTa                                                                                                                  >  8:222839/1‑139 (MQ=255)

                         caagtcaagtTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTa                                                                                                                  >  7:52903/1‑139 (MQ=255)

                           agtcaagtTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTACATCTTTATTTTATCATAAAGGAGTAt                                                                                                                 >  6:123328/1‑139 (MQ=255)

                           agtcaagtTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTACATCTTTATTTTATCATAAAGGAGTAt                                                                                                                 >  7:31053/1‑139 (MQ=255)

                                 gtTATATGTATCTATAATGATTTGTGGAAGTTTCGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCCTCTCGTCGCTTTCCATCTTTAATTTATCAGAAAGGAGTATTTGAAc                                                                                                           >  1:217002/1‑139 (MQ=255)

                                    atatGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCTCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCg                                                                                                         <  5:146386/138‑1 (MQ=255)

                                    atatGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTAGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTGTTTTATCATAAAGGAGTATTTGAACCg                                                                                                         <  1:255902/138‑1 (MQ=255)

                                      atGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATATTTATTTTTTCAGGAAGGAGTATTTGAAAAGTcg                                                                                                      >  8:179849/1‑139 (MQ=255)

                                      atGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTcgc                                                                                                     >  7:240803/1‑139 (MQ=255)

                                      atGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTcgc                                                                                                     >  3:181167/1‑139 (MQ=255)

                                         tATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTGTCATAAAGGAGTATTTGAACCGTcgcg                                                                                                    <  5:77845/138‑1 (MQ=255)

                                          aTCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTTCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTcgcgcg                                                                                                  >  8:200510/1‑139 (MQ=255)

                                          aTCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTcgcgcg                                                                                                  >  2:67004/1‑139 (MQ=255)

                                           tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTTCAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATGAAgg                                                                                                                      <  8:283823/118‑1 (MQ=255)

                                           tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTGTCATAAAGGAGTATTTGAACCGTcgcg                                                                                                    >  5:282796/1‑136 (MQ=255)

                                           tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTGTCATAAAGGAGTATTTGAACCGTCGCGCgg                                                                                                 >  1:100267/1‑139 (MQ=255)

                                           tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTGTCATAAAGGAGTATTTGAACCGTCGCGCgg                                                                                                 >  8:158713/1‑139 (MQ=255)

                                           tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCtttattt                                                                                                                                 >  7:261060/1‑106 (MQ=255)

                                           tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATaa                                                                                                                         >  3:280790/1‑114 (MQ=255)

                                           tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCgg                                                                                                 >  5:259530/1‑138 (MQ=255)

                                           tCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCgg                                                                                                 >  4:291400/1‑138 (MQ=255)

                                            cTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTACATCtttatttta                                                                                                                               <  1:46698/108‑1 (MQ=255)

                                               tattGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACTATCTTTTTTTTATTAGCCTTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGa                                                                                               <  7:281316/134‑1 (MQ=255)

                                               taATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTGTTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGa                                                                                               >  1:95184/1‑137 (MQ=255)

                                               taATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTGTTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGAc                                                                                              <  6:166937/138‑1 (MQ=255)

                                               taATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCGTAAAGGAGTATTTGAACCGTCGCGCGGGa                                                                                               <  3:223418/137‑1 (MQ=255)

                                               taATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTACATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGa                                                                                               <  3:53471/137‑1 (MQ=255)

                                               taATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGa                                                                                               <  4:39923/136‑1 (MQ=255)

                                               taATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGa                                                                                               <  1:123868/136‑1 (MQ=255)

                                               taATGATTTGTGGAAGTTATGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGa                                                                                               <  7:15860/137‑1 (MQ=255)

                                                  tGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTGTCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGt                                                                                          >  6:208796/1‑139 (MQ=255)

                                                  tGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTACATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGt                                                                                          >  6:299053/1‑139 (MQ=255)

                                                  tGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTACATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGt                                                                                          <  1:15165/139‑1 (MQ=255)

                                                    aTTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGa                                                                                               <  3:261501/131‑1 (MQ=255)

                                                     tttGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATGAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTa                                                                                       >  4:114979/1‑139 (MQ=255)

                                                     tttGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAATGGAGTATTTGAACCGTCGCGCGGGACAGGTTTAt                                                                                      >  4:141086/1‑139 (MQ=255)

                                                       tgtgGAGGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATg                                                                                     >  6:95706/1‑139 (MQ=255)

                                                       tgtgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTACATCTTTTTTTTATCATAAAGGTGTATTTGAACCGGACCGCGGGACAGGTTTATg                                                                                     >  3:161252/1‑139 (MQ=255)

                                                       tgtgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTACATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGa                                                                                               >  1:296815/1‑129 (MQ=255)

                                                       tgtgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTTAATATTTATTTTATCATAATTGGGTATTTTAACCTTAGCGCGGGACAGGTTTATgt                                                                                    >  3:203038/1‑138 (MQ=255)

                                                       tgtgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGa                                                                                    >  8:56148/1‑139 (MQ=255)

                                                         tgGAAGTTTTTCCACTACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGAGCGTGACAGGTTTATGAt                                                                                   <  8:77669/139‑1 (MQ=255)

                                                         tgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGa                                                                                    >  1:67315/1‑138 (MQ=255)

                                                         tgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTACatct                                                                                                                                       >  7:76141‑M2/1‑83 (MQ=255)

                                                         tgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTACATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGa                                                                                    >  6:142569/1‑138 (MQ=255)

                                                         tgGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCACCCTCATCTCGTCTCTTTATATCTTTATTTTATCGTAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGAt                                                                                   <  4:62018/139‑1 (MQ=255)

                                                            aaGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAggg                                                                               <  4:246266/139‑1 (MQ=255)

                                                            aaGTTTTGCCACAACAGTTGGTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAggg                                                                               <  6:75983/139‑1 (MQ=255)

                                                             aGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTACATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAggg                                                                               <  1:276413/139‑1 (MQ=255)

                                                                     cacaACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTa                                                                       <  2:212983/139‑1 (MQ=255)

                                                                     cacaACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTa                                                                       <  7:180277/139‑1 (MQ=255)

                                                                       catcaGTTGGTTTAATTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTACATCTTTATTTTATCTTAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTAtt                                                                     <  8:138509/136‑1 (MQ=255)

                                                                                gTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa                                                           <  3:74722/139‑1 (MQ=255)

                                                                                gTTTATTTACAATC‑TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa                                                           <  1:23695/139‑1 (MQ=255)

                                                                                 tttatttaCATTCTTTTTTTTATTAGCCGTCTAATTTGTCACTCATCTCTTCTCTTTAAATCTTTATTTTATCATAATGGTGTATTCGAACCGTCGCGCGGGACAGTTTTATGATATTTATATTTTATTGAATAAttta                                                           <  4:83069/139‑3 (MQ=255)

                                                                                 tttatttaCAATCTTTTTTTTATTAGCCGTCAAATTTCTCTCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa                                                           <  3:2412/139‑1 (MQ=255)

                                                                                 tttatttaCAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCGTAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa                                                           <  3:112656/139‑1 (MQ=255)

                                                                                 tttatttaCAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa                                                           <  2:150634/139‑1 (MQ=255)

                                                                                 tttatttaCAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa                                                           <  7:11781/139‑1 (MQ=255)

                                                                                 tttatttaCAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa                                                           <  5:59445/139‑1 (MQ=255)

                                                                                 tttatttaCAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTACATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa                                                           <  3:31403/139‑1 (MQ=255)

                                                                                 tttatttaCAATCTTTTTTTTATTAGCCGTCAAATTTCTCACTCATCTCGTCTCTTTATATCTTTATTTTGTCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa                                                           <  5:33769/139‑1 (MQ=255)

                                                                                 tttatttaCAATCTTTTTTTTATTAGCCGTCAAATTTCTACCTCATCTCGTCTCTTTATATCTTTATTTTATCGTAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa                                                           <  2:90425/139‑1 (MQ=255)

                                                                                 tttaattaCAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTTTATCTTTATTTTATCGTAAAGGAGTATTTGTACCGTCGCGCGGGACAGGTTTTTGATAGGGATATTTTATTGTATAATTGa                                                           <  7:136589/139‑1 (MQ=255)

                                                                                  ttatttaCAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTcg                                                                                                      >  3:134348/1‑95 (MQ=255)

                                                                                    atttaCAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGATgg                                                        >  8:119428/1‑139 (MQ=255)

                                                                                    atttaCAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTACATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGATg                                                         <  6:279135/138‑1 (MQ=255)

                                                                                           aatcTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGATGGTATAAgg                                                 >  7:98771‑M1/5‑139 (MQ=255)

                                                                                            atcTTTTTTTATTAGCCGTCAAATTTCTCCATCATCTCGTCTCTTTATATATTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGATGGTATAAgg                                                 <  2:190862‑M1/135‑1 (MQ=255)

                                                                                             CTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTGTCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGATGGTATAAGGGa                                               >  4:226372‑M1/1‑139 (MQ=255)

                                                                                               TTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTGTCTCTATATGTTTATTTTATAATGAAGGAGTATTTGATCCGTCGCGCGGGACAGGTTTATGATTGGGATATTTTATTGAATAATTGATGGTATAAGggaat                                             <  5:173812‑M1/139‑3 (MQ=255)

                                                                                                    ttattaGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTACATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGATGGTATAAGGGACTTTCa                                         <  2:299647/138‑1 (MQ=255)

                                                                                                         aGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTTTTTGTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCTGGACAGGTGTATGATAGTGATATTTTATTGAATAATTGATGGTATAAGGGACTTTCATGCTTg                                   >  4:166742/1‑139 (MQ=255)

                                                                                                                         ccTCATCTCGTCTCTTTATATCTTTATTTTATCGTAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGATGGTATAAGGGACTTTCATGCTTGGAAAGTGGGGATTa                     <  2:27435/137‑1 (MQ=255)

                                                                                                                         ccTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGa                                                           >  6:188805/1‑99 (MQ=255)

                                                                                                                         ccTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGATGGTATAAGGGACTTTCATGCTTGGAAAGTGGGGATTAt                    <  2:253152/138‑1 (MQ=255)

                                                                                                                               ctcGTCTCTTTATATCTTTATTTTGTCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGATGGTATAAgg                                                 <  5:99638/103‑1 (MQ=255)

                                                                                                                                  gTCTCTTTACATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGATGGTATAAGGGACTTTCATGCTTGGAAAGTGGGGATTATGAATTAGa            <  6:253437/137‑1 (MQ=255)

                                                                                                                                       tttATATCTTTATTTTGTCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGATGGTATAAGGGACTTTCATGCTTGGAAAGTGGGGATTATGAATTAGATGCtt       <  3:94338/137‑1 (MQ=255)

                                                                                                                                       tttACATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGATGGTATAAGGGACTTTCATGCTTGGAAAGTGGGGATTATGAATTAGATGCtt       <  4:208336/137‑1 (MQ=255)

                                                                                                                                          atatCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGATGGTATAAGGGACTTTCATGCTTGGAAAGTGGGGATTATGAATTAGATGCTTGTcc   <  2:47393/138‑1 (MQ=255)

                                                                                                                                          atatCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGATGGTATAAGGGACTTTCATGCTTGGAAAGTGGGGATTATGAATTAGATGCTTGTcc   <  5:126109/138‑1 (MQ=255)

                                                                                                                                           tatCTTTGTTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGATGGTATAAGGGACTTTCATGCTTGGAAAGTGGGGATTATGAATTAGATGCTTGTCca  <  7:222617/138‑1 (MQ=255)

                                                                                                                                           tatCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGATGGTATAAGGGACTTTCATGCTTGGAAAGTGGGGATTATGAATTAGATGCTTGTCca  <  6:53712/138‑1 (MQ=255)

AAACATTTTTACATCGTTAGAAGTGCAAGTCAAGTTATATGTATCTATAATGATTTGTGGAAGTTTTGCCACAACAGTTGGTTTATTTACAATCTTTTTTTTATTAGCCGTCAAATTTCTCCCTCATCTCGTCTCTTTATATCTTTATTTTATCATAAAGGAGTATTTGAACCGTCGCGCGGGACAGGTTTATGATAGGGATATTTTATTGAATAATTGATGGTATAAGGGACTTTCATGCTTGGAAAGTGGGGATTATGAATTAGATGCTTGTCCA  >  Exported/2085‑2361

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`