| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BS168_reference_genome | 1,204,963 | T→A | 22.8% | intergenic (‑47/‑202) | yjzD ← / → yjaU | forespore targeted protein/conserved hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 1,204,963 | 0 | T | A | 22.8% | 113.0 / 9.1 | 67 | intergenic (‑47/‑202) | yjzD/yjaU | forespore targeted protein/conserved hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (33/18); new base A (2/14); total (35/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.64e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACGCTGTTCATGCTTGCAACCAAGTAGCATGCCATATGTGATAAAAGGAACGTCCAAATAAAGGCAATAAT‑ATATCGCACGTTTCCACCTCGTCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAATCAGTATAATAGCCAAAAATGTAAAAGGCTAGGACTTTACCTTA > BS168_reference_genome/1204837‑1205101 | aCGCGGTTGATGATTGCAACAATTAATCATGCAAAATGTGATAAACTTAACGTCAAAATAAAGGCAATAAT‑ATATCCCACGTTTCCACTTCGTCTTTCTTATTTTATTATAATAGTTATC‑ATA‑CCAAAAAAAAAGCG‑a < 4:154323/138‑1 (MQ=255) cGCTGTTCATGCTTGCAACCAAGTAGCATGCCATATGTGATAAAAGGAACGTCCAAATAAAGGCAATAAT‑ATATCGCACGTTTCCACCTCGTCCTTCTCATTATATTCTAAAAGTTATC‑ATA‑CCAAACAAAACTCG‑AAg > 6:162000/1‑139 (MQ=255) ttCATGCTTGCAACCAAGTAGCATGCCATATGTGATAAAAGGAACGTCCAAATAAAGGCAATAAT‑ATATCGCACGTTTCCACCTCGTCCTTCTCTTTCTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAggggg > 5:109846/1‑138 (MQ=255) ttCATGCTTGCAACCAAGTAGCATGCCATATGTGATAAAAGGAACGTCCAAATAAAGGCAATAAT‑ATATCGCACGTTTCCACCTCGTCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAggggg > 5:143780/1‑138 (MQ=255) ttCATGCTTGCAACCAAGTAGCATGCCATATGTGATAAAAGGAACGTCCAAATAAAGGCAATAAT‑ATATCGCACGTTTCCACCTCGTCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAggggg > 3:145942/1‑138 (MQ=255) ttCAGGCTTCCAACCAAGTAGCTTGCAATATGTGAAAAAAGGAACGTCAAAATAACGGAAATAAT‑ATATCGCACGTTTCCACCTCGTCCTTCTCATTCTATTAAAAAAGTTAAC‑AAA‑CCATACAAAAAGCG‑AAgggg < 6:109846/137‑1 (MQ=255) caaaCAAAGTACCTTGCAATATGTTTAAAATTGACCGT‑CAAATAAATGGAAAAATAATACCCCCAGTTGCCACCTCGTCCTCCTCATTATTTTATAAAA‑TTAAT‑ATACCCATACAAAACGCG‑AAGGGGGAATCCAAtt < 6:281922/136‑1 (MQ=255) cAACCAAGTAGCATGCCATATGTGATAAAAGGAACGTCCAAATAAAGGCAATAAT‑ATATCGCACGTTTCCACATAGTCCTACTCAATCTATTCTAAAAGTTATC‑ATA‑CAATACAAAAAGCG‑AAGGCGGAATCCAAttat > 5:281922/1‑137 (MQ=255) ccAAGTACCATGCCATATGGTATAACAGTAACGACCAAATAAAGGCAAAAAT‑AAATCGCACGTTTCCACCTCGTCCTTCTCATTATATTAAAAAAGTAATA‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGc < 2:97924/139‑1 (MQ=255) tGCCATATGTGATAAAAGGAACGTCCAAATAAAGGCAATAAT‑ATATCGCACGTTTCCACCTCGTCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCTGATAGTGAg > 6:180250/1‑139 (MQ=255) tatGTGATAAAAGGAACGTCCAAATAAAGGCAATAAT‑ATATCGCACGTTTCCACCTCGTCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGa > 6:272971/1‑138 (MQ=255) tatGTGATAAAAGGAACGTCCAAATAAAGGCAATAAT‑ATATCGCACGTTTCCACCTCGTCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGa > 5:100256/1‑138 (MQ=255) ttgATAAAAGGAACGTCCAAATAAAGGCAATAAT‑AAATCTCACGTTTCCACATCTTCCTTCTCATTCTATTCTAAAAGTTAAA‑ATA‑ACAAACAAAAACAT‑AAGGGGGAATCAAATTTTAGAAGAAAGTGAGGTGACaa > 1:284273/2‑138 (MQ=255) tgATAAAAGCAACGTCAAAAAAAAGGAAATAAT‑ATACCGCACGTTTCCACCTCGTCCTTCACATTCTATTCTAAAAGTTATC‑AAA‑CCAAACAAAACGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACaaaa < 3:105504/139‑1 (MQ=255) aTAAAAGGAACGTCCAAATAAAGGCAATAAT‑ATATCGCACGTTTCCACCTCGTCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACaaaa > 5:82165/1‑137 (MQ=255) aTAAAAGGAACGTCCAAATAAAGGCAATAAT‑ATATCGCACGTTTCCACCTCGTCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGAAGAAAGTGAGGTGACaaaa > 6:65314/1‑137 (MQ=255) aTAAAAGGAACGTCCAAATAAAGGCAATAAT‑ATATCGCACGTTTCCACCTCGTCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATAAAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACaaaa > 3:38945/1‑137 (MQ=255) tAAAAGTAATGTCAAAAAAACGCAAAAAAT‑ATCTCCCACGTTTCAACCTGGTCTTTATCTTTCTATTATAAAATTTAAC‑ATA‑CAAAAAAAAACGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAaga < 4:38945/138‑1 (MQ=255) tAAAAGGAACGTCCAAATAAAGGCAATAAT‑ATATCGCACGTTACCACCTCGGCCTTCTCATTATATTCTAAAAGTTATC‑AAA‑ACATACAAAAAGCG‑AAGGGGGAATCAAAATTATGCAGAAAGTGAGGTGACaaaa > 6:174318/1‑136 (MQ=255) caccGTCCAAATAAAGCCAATAAT‑ATATCGCACGTTCCCACCTCGGCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACTAAAGAGTCTGAt < 7:78086/136‑1 (MQ=255) ccAAATAAAGGCAATAAT‑ATATCGCACGTTTCCACCTCGTCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTca < 6:143780/139‑1 (MQ=255) caaaaTAAAGCAAATAAT‑ATATCCCACGTTTCCACCTCGTCCTTCTAATTCTATTATAAAAGTTAAC‑AAA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTca < 3:114261/137‑1 (MQ=255) cAAATAAAGCCAATAAT‑ATATCGCACGTTTCCACCTCGTCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATAAAAAACGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTcac < 8:83598/139‑1 (MQ=255) ggCAATAAT‑ATATCGCACGTTTCCACCTCGTCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGTTGACAAAAGAGTCTGATTCGTCACACTTTAAt > 5:292027/1‑139 (MQ=255) ggCAATAAT‑ATATCGCACGTTTCCACCTCGTCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAAt > 7:76306/1‑139 (MQ=255) aataat‑ATATCGCACGTTTCCACCTCGTCCTTCTCATTCTATTTTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGt < 8:211307/139‑1 (MQ=255) aataat‑ATATCGCACGTTTCCACCTCGTCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACCCTTTAATgg > 4:34475/1‑138 (MQ=255) aataat‑ATATCGCACGTTTCCACCTCGTCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATgg > 2:114167/1‑138 (MQ=255) ataat‑aTAGCGCACGTTTCCCCCTCTTCATTCTCATTCTATTCTAAATTTTATA‑AAA‑ACAAACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTa < 6:100256/139‑1 (MQ=255) aaaat‑aTATCGCCCTATCCCCCCTCGTCCTTCTCATTAAATTCTAAAAGTTATC‑AAA‑CAAAACAAAACGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTa < 6:78888/137‑1 (MQ=255) ataaattatCGCACGTATCCACCTGGCCCTTCTCATACTATTCTAAAAGTTACC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTa < 8:3430/133‑1 (MQ=255) aatttCGCACGTGTCCACTGCGTCCTTCTCATTATATTGAAAAAG‑TATCAAAA‑CCCATCAAAACGCGCACGCGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTaaaa < 2:211137/135‑1 (MQ=255) tatCGCACGTTTCCACCTCGTCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAata > 5:148759/1‑138 (MQ=255) tCGCACGTTACCACCTCGTCCTTCTAATTCTATTCAAAAAGTTATC‑ATA‑CAATAAAAAACGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATaa < 5:73406/139‑1 (MQ=255) cGCACGTTTCCACCTCGTCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATaa > 7:55220/1‑138 (MQ=255) cGCACGTTTCCACCTCGTCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATATTAGCTGAAAGTGAGGTGACAAAAGAGTCTGCTACTTCACACTTTAATGGGAATATATaa > 1:211137/1‑138 (MQ=255) cACGTTTCCACCTCGTCCTTCTCATTGTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGACACACTTAAAAGGTAAAATATAAAAc > 5:49742/1‑139 (MQ=255) cACGTTTCCACCTCGTCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAATTGAGGTGACAAAAGAGTCTGATTCGTCGCACTTTAATGGTAAAATATAAAAc > 3:196455/1‑139 (MQ=255) cACGTTTCCACCTCGTCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAATTATAAAAc > 5:14216/1‑139 (MQ=255) cACGTTTCCACCTCGTCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAAc > 3:202450/1‑139 (MQ=255) cACGTTTCCACCTCGTCCTTCTCAATCTATTCTAAAAGTTATC‑ATA‑CCATACATAAAGCG‑AACCGCGAATCCAATTTTATCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAAc > 3:195778/1‑139 (MQ=255) cGTTTCCACCTCGTCCTTCTCATTCTATTCTGAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGt > 5:86624/1‑139 (MQ=255) ctcccACCGCGCCCTTCTCATACAATTCAAAAAGTTAAC‑AAA‑CCAAACAAAACGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCa < 2:63828/136‑1 (MQ=255) ttCCACCTCGTCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCaa > 3:96618/1‑139 (MQ=255) tCCACCTCGTCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCaa > 7:239477/1‑138 (MQ=255) cccccTCGTCATTCTCATTAAATTCTAAAAGTTATC‑AAC‑CCAAACAAAAAGCG‑CAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAAt < 8:76306/135‑1 (MQ=255) ccACCTCTTCCTTTTAATTAAATTATAAAATTTATC‑ATA‑ACAAAAAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAAt < 6:14216/138‑1 (MQ=255) ccACCTCTTCCTTCTCATTCTATTCTAAAATTTATC‑ATA‑CAAAAAAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAAt < 5:272971/138‑1 (MQ=255) ccACCTCGTCGTTCTAATTCAATTATAAAAGTTATC‑ATA‑CCAAAAAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAAt < 6:82165/138‑1 (MQ=255) ccACCTCGTCCTTCTCATTCTATTAAAAAATTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAAt < 8:55220/138‑1 (MQ=255) ccACCTCGTCCTTCTAATTATATACAAAAAGTTATC‑AAA‑CCAAAAAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAAt < 4:266662/138‑1 (MQ=255) ccACCTCGTCATTATAATTATATTATAAAATTTTTC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACTAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAAt < 6:49742/138‑1 (MQ=255) ccAACTCGTCCTACTAATTCTATTCAAAAAGTTATA‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAAt < 3:272986/138‑1 (MQ=255) caaCCTCGTCCTTCTCATTCTATTATAAAATTTATC‑ATA‑CAATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAAt < 6:292027/136‑1 (MQ=255) acACCTCGTCCTTCTCATTATATTATAAAATTTAAC‑ATA‑CCATAAAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAAt < 1:141968/137‑1 (MQ=255) cGTCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAATCAGtat > 3:118333/1‑138 (MQ=255) tCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACCCTTTAATGGTAAAATATAAAACGTCAATCAGTataa > 3:158355/1‑138 (MQ=255) tCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAATCAGTataa > 5:210330/1‑138 (MQ=255) tCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAATCAGTataa > 2:290315/1‑138 (MQ=255) tCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAATCAGTataa > 3:219982/1‑138 (MQ=255) ttctaAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAATCAGTATAATAGCCAAAAATGTaa < 4:145942/139‑1 (MQ=255) tcataaaTTTATC‑ATA‑CCAAAAAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAATCAGTATAATAGCCAAAAATGTaa < 6:86624/134‑1 (MQ=255) aaaGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAATCAGTATAATAGCCAAAAATGTAAAAGGc < 4:96618/139‑1 (MQ=255) aattaaTC‑ATA‑CCAAAAAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAATCAGTATAATAGCCAAAAATGTAAAAGGCt < 4:202450/134‑1 (MQ=255) aaGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAATCAGTATAATAGCCAAAAATGTAAAAGGCt < 8:239477/139‑1 (MQ=255) tATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAATCAGTATAATAGCCAAAAATGTAAAAGGCTAGGa > 7:245960/1‑139 (MQ=255) tATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAATCAGTATAATAGCCAAAAATGTAAAAGGCTAGGa > 1:182740/1‑139 (MQ=255) catacAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAATCAGTATAATAGCCAAAAATGTAAAAGGCTAGGACTTTAcc > 6:156033/1‑138 (MQ=255) catacAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAATCAGTATAATAGCCAAAAATGTAAAAGGCTAGGACTTTACCt > 8:275234/1‑139 (MQ=255) atacAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAATCAGTATAATAGCCAAAAATGTAAAAGGCTAGGACTTTACCt > 4:180738/1‑138 (MQ=255) atacAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAATCAGTATAATAGCCAAAAATGTAAAAGGCTAGGACTTTACCt > 2:244601/1‑138 (MQ=255) tacAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAATCAGTATAATAGCCAAAAATGTAAAAGGCTa > 4:38892/1‑126 (MQ=255) tacAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAATCAGTATAATAGCCAAAAATGTAAAAGGCTAGGACTTTACCTTa > 7:219217/1‑139 (MQ=255) tacAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAATCAGTATAATAGCCAAAAATGTAAAAGGCTAGGACTTTACCTTa > 8:200886/1‑139 (MQ=255) | ACGCTGTTCATGCTTGCAACCAAGTAGCATGCCATATGTGATAAAAGGAACGTCCAAATAAAGGCAATAAT‑ATATCGCACGTTTCCACCTCGTCCTTCTCATTCTATTCTAAAAGTTATC‑ATA‑CCATACAAAAAGCG‑AAGGGGGAATCCAATTTTAGCAGAAAGTGAGGTGACAAAAGAGTCTGATTCGTCACACTTTAATGGTAAAATATAAAACGTCAATCAGTATAATAGCCAAAAATGTAAAAGGCTAGGACTTTACCTTA > BS168_reference_genome/1204837‑1205101 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |