| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | BS168_reference_genome | 3,770,066 | (A)8→9 | intergenic (‑258/+38) | ywzF ← / ← csbD | conserved protein of unknown function/stress response protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 3,770,058 | 1 | . | A | 90.9% | 378.5 / 28.1 | 121 | intergenic (‑250/+46) | ywzF/csbD | conserved protein of unknown function/stress response protein |
| Reads supporting (aligned to +/- strand): ref base . (7/4); new base A (71/39); total (78/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 124 total aligned reads displayed.
ATGTTATAAAAGTTTACAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCG‑‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCTTCAGCCTG > BS168_reference_genome/3769924‑3770190 | tgTTATAAAAGTTTACAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCG‑‑a‑aa‑a < 2:150377/138‑1 (MQ=255) gTTATAAAAGTTTACAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCG‑‑a‑aa‑aa > 1:18077/1‑138 (MQ=255) ttACAACTTATGTCATCATTATATAGAAGATGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGCCCACATCAGCTTCTTTGTGTGTTATATTTATTCACATCAGAAAAAGCG‑‑ACAA‑AA‑AAA‑GACAGGa > 1:239816/1‑138 (MQ=255) ttACAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCG‑‑A‑AA‑AA‑AAA‑GACAAGaaa > 5:164122/1‑139 (MQ=255) aTGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCgg > 3:300704/1‑138 (MQ=255) aTGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGt > 1:269048/1‑139 (MQ=255) aTGTCATCATTAAATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCg < 2:270119/138‑1 (MQ=255) tatataGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAATAAACATTTCTTTTCATGCct > 6:142721/1‑138 (MQ=255) tatataGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTATTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCctc > 6:75033/1‑139 (MQ=255) agaagaGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCg < 8:288834/139‑1 (MQ=255) gaagaGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCg < 1:202696/138‑1 (MQ=255) aagaGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAACAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTa > 8:28238/1‑139 (MQ=255) aagaGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACAttt < 6:76591/119‑1 (MQ=255) aagaGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCTTTTCCTGCCTCTTCCGTa > 6:92199/1‑139 (MQ=255) aagaGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTa > 4:230754/1‑139 (MQ=255) aagaGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTa > 2:361486/1‑139 (MQ=255) agGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCg < 7:388855/134‑1 (MQ=255) agGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCg > 8:388855/1‑134 (MQ=255) agGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGa > 5:500508/1‑139 (MQ=255) ggCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt < 7:410976/139‑1 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCCGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCGTCCGTACGAt > 1:385589/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAACAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATATCGTTTCCTGCCTCTTCCGTACGAt > 1:207446/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAAGATTTCGTTTCCTGCCTCTTCCGTACGAtt > 7:366087/1‑139 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACAtt > 2:333623/1‑113 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACAtt < 1:333623/113‑1 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCg < 4:120055/132‑1 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCg > 3:120055/1‑132 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAtt < 3:293969/139‑1 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 2:502063/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 5:478409/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 1:289327/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 3:402781/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 3:406741/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 3:425417/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 8:132495/1‑138 (MQ=255) gCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCG‑‑ATAA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 7:482492/1‑138 (MQ=255) gCCTATTAATTCAAAGAAGATTTAAAAAATTTAGTTCCCTTGACCAAATCAGCTTCTTGTTTTGTTATATTTATTCACATCAGAAAAAGCG‑‑A‑AA‑AA‑AAACGACACGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 2:438009/1‑138 (MQ=255) gCCTATTAAATCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGGTTCTTTTTTTTTTATATTTATTCTCATCAGAAATAGCG‑‑ATAA‑TA‑AAA‑GACAAGAAACATTTCGTTTCATGCCTGTTCCGTACGAtt > 8:338762/1‑139 (MQ=255) gCCTATTAAATCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGAt > 6:370901/1‑138 (MQ=255) ttAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAA‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTa < 3:345742/130‑1 (MQ=255) ttAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAA‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTa > 4:345742/1‑130 (MQ=255) ttAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCt > 1:126341/1‑139 (MQ=255) ttAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCt > 6:460063/1‑139 (MQ=255) ttAATTCAAAGAAAATTTTAAAAATATAGTAACCTTGACCAAATCAGCTTCTTTTTTTGAAATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAAAATTTCGTTTCCTGCCACTTCCGTACGATTAATCt > 3:240433/1‑139 (MQ=255) aaTTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCtt < 2:126341/138‑1 (MQ=255) tCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATc > 6:307581/1‑139 (MQ=255) tCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTAACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATc > 3:257781/1‑139 (MQ=255) cAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCt > 3:255470/1‑139 (MQ=255) aaaGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTg < 4:425417/139‑1 (MQ=255) aaGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTg > 3:344410/1‑138 (MQ=255) aaGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTg > 6:430810/1‑138 (MQ=255) atatatAAAAAAATTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAAt < 8:304847/139‑1 (MQ=255) tatTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAAtt < 4:352804/139‑1 (MQ=255) tatTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAAtt < 2:269048/139‑1 (MQ=255) tttAAAAAATTTAGTTACATTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTa > 4:73336/1‑139 (MQ=255) aaaaaTTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATAAGAAAAACCG‑‑A‑AACAA‑AAA‑GCCCAGCAACATTTCGTTTGCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCt < 2:294126/139‑1 (MQ=255) aTTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGc < 3:366268/139‑1 (MQ=255) tttAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCt < 2:263338/139‑1 (MQ=255) ccTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCG‑‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGata < 5:213244/139‑1 (MQ=255) cTTGACCAACTGATCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GAAAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTTAAAATTTATCATTGGCTTTCCCGata < 5:142721/139‑1 (MQ=255) cTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGata < 4:390840/139‑1 (MQ=255) cTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGata < 1:361486/139‑1 (MQ=255) cTTGACCAAATCAGCTTCTTTTTTTGTTATAATTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGata < 5:307581/139‑1 (MQ=255) cTTGACCAAATCAGCTTCTTTATTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGata < 5:75033/139‑1 (MQ=255) aTCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGAAA‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTg > 8:220318/1‑139 (MQ=255) aTCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGata > 7:152331/1‑130 (MQ=255) aTCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGata < 8:152331/130‑1 (MQ=255) aTCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTg > 7:441646/1‑138 (MQ=255) aTCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTg > 3:489220/1‑138 (MQ=255) aTCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCG‑‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGa > 8:244406/1‑139 (MQ=255) gCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCtt < 6:141943/118‑1 (MQ=255) gCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCtt > 5:141943/1‑118 (MQ=255) gCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGAttt < 5:370901/139‑1 (MQ=255) gCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCG‑‑A‑AA‑AATAAA‑GACAAGAAACATATCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGAttt < 3:66964/139‑1 (MQ=255) cttcttTTTTTGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCGTCCGTACGCTTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGAtt > 1:153516/1‑137 (MQ=255) tttttGTTATATTTATTCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCtt < 6:478409/138‑1 (MQ=255) atataaattCACATCAGAAAAAGAGA‑A‑AA‑AA‑AAA‑GACAAGAAACATATCGTTTCCTCACACTTCCGTAAGATTAATCTTAATCTGAAAATTTATACTTCGCTTTCCAGATATCATTTAGGATTTCGCGTTATGCATTAt > 4:240930/7‑139 (MQ=255) atttattCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCttt > 8:371039/1‑102 (MQ=255) atttattCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCttt < 7:371039/102‑1 (MQ=255) attCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCttttt > 7:299089/1‑139 (MQ=255) attCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTAGCttttt > 8:102954/1‑139 (MQ=255) ttCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCttttt < 3:73336/138‑1 (MQ=255) ttCACATCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCttttt < 4:367872/138‑1 (MQ=255) acaTCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACCTTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGcc < 2:207446/139‑1 (MQ=255) caTCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCGTTTTGCCTTATCTTTTTTGCCt > 6:451634/1‑139 (MQ=255) caTCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGACATCCTTTTGGATTTCGCCTTTTGCCTTa < 8:102688/127‑1 (MQ=255) caTCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGATTTCCCGACATCCTTTTGGATTTCGCCTTTTGCCTTa > 7:102688/1‑127 (MQ=255) aTCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCtt > 4:475352/1‑139 (MQ=255) aTCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCtt < 1:319639/139‑1 (MQ=255) aTCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCtt > 2:17408/1‑139 (MQ=255) aTCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCtt > 3:225184/1‑139 (MQ=255) aTCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCtt > 7:146985/1‑139 (MQ=255) aTCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCtt > 5:228451/1‑139 (MQ=255) aTCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCACGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCtt > 7:38463/1‑139 (MQ=255) aTCAGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATATTTATCTGAAAATTTTTCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCATTATCTTTTTTGCGtt > 7:45972/1‑139 (MQ=255) cAGAAAAAGCGAAA‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCTTc > 7:150527/1‑139 (MQ=255) aGAAAAAGCGAAA‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCTTCa < 7:220318/139‑1 (MQ=255) aGAAAAAGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCTTCa < 4:445357/138‑1 (MQ=255) caaGCG‑‑A‑AACAC‑AAA‑GCGAAGACACATGTCGTTTGCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGCTATCCTTTTGGATTTCGCCTTTTGCCTTCTCTTTTTTGCCTTCAGCCTg < 1:438009/138‑1 (MQ=255) aaaGCGA‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCTTCAGCCTg < 5:473484/139‑1 (MQ=255) | ATGTTATAAAAGTTTACAACTTATGTCATCATTATATAGAAGAGGCCTATTAATTCAAAGAATATTTAAAAAATTTAGTTACCTTGACCAAATCAGCTTCTTTTTTTGTTATATTTATTCACATCAGAAAAAGCG‑‑A‑AA‑AA‑AAA‑GACAAGAAACATTTCGTTTCCTGCCTCTTCCGTACGATTAATCTTTATCTGAAAATTTATCCTTGGCTTTCCCGATATCCTTTTGGATTTCGCCTTTTGCCTTATCTTTTTTGCCTTCAGCCTG > BS168_reference_genome/3769924‑3770190 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |