| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | BS168_reference_genome | 944,526 | A→G | K14E (AAG→GAG) | perR → | transcriptional regulator (Fur family) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 944,526 | 0 | A | G | 99.5% | 747.3 / NA | 193 | K14E (AAG→GAG) | perR | transcriptional regulator (Fur family) |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (89/103); total (90/103) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 193 total aligned reads displayed.
TACCCTGATATCAATTGACAAATTATCGTAGAAAGAGTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACG > BS168_reference_genome/944390‑944660 | tACCCTGATATCAATTGACAAATTATCGTAGAAAGAGTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAg > 7:400870/1‑139 (MQ=255) cccTGATATCAATTGACAAATTATCGTAGAAAGAGTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAgg > 4:77793/1‑138 (MQ=255) cccTGATATCAATTGACAAATTATCGTAGAAAGAGTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAgg > 5:473655/1‑138 (MQ=255) tGATATCAATTGACAAATTATCGTAGAAAGAGTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAAc > 8:67030/1‑139 (MQ=255) atatCAATTGACAAATTATCGTAGAAAGAGTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAACCCg > 8:397651/1‑139 (MQ=255) atatCAATTGACAAATTATCGTAGAAAGAGTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCg > 8:264928/1‑139 (MQ=255) atatCAATTGACAAATTATCGTAGAAAGAGTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCg > 5:437271/1‑139 (MQ=255) aaTTGACAAATTATCGTAGAAAGAGTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGtt < 1:105380/139‑1 (MQ=255) aaTTGACAAATTATCGTAGAAAGAGTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGt < 3:77793/138‑1 (MQ=255) aaTTGACAAATTATCGTAGAAAGAGTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGt < 1:311593/138‑1 (MQ=255) aTTGACAAATTATCGTAGAAAGAGTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTc > 2:321696/1‑139 (MQ=255) aTTGACAAATTATCGTAGAAAGAGTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACACGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTc > 2:464025/1‑139 (MQ=255) ttGACAAATTATCGTAGAAAGAGTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCg > 2:224439/1‑139 (MQ=255) aCAAATTATCGTAGAAAGAGTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCAt > 8:488422/1‑139 (MQ=255) cAAATTATCGTAGAAAGAGTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCAt < 5:124855/138‑1 (MQ=255) aaaTTATCGTAGAAAGAGTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTa < 4:63224/139‑1 (MQ=255) aaTTATCGTAGAAAGAGTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTAc < 7:67030/139‑1 (MQ=255) ttATCGTAGAAAGAGTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTActc > 5:443801/1‑139 (MQ=255) tCGTAGAAAGAGTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTActcctc < 2:483861/139‑1 (MQ=255) aaaGAGTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGt > 5:270636/1‑138 (MQ=255) agagTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGACACCGGAGTTCGCATTACTCCTCAACGTCAt > 8:363719/1‑139 (MQ=255) gagaaacacTATTTATAAACAATACAATGTAAGTATTTTTTTTAGAAGAGAGGTGCCTGACGGATGGATGCACATGAACTATAAGAAGCCTTAGAAACGCTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATg < 6:207996/134‑1 (MQ=255) gagTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATg < 6:152002/139‑1 (MQ=255) gagTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATg < 7:264928/139‑1 (MQ=255) gagTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATg < 6:443801/139‑1 (MQ=255) agTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGc > 6:322922/1‑139 (MQ=255) agTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGc > 4:292139/1‑139 (MQ=255) tttcacTAATTATCAACATTACAATGTTAGAATTTTTTTTAGCAGAGCGGTGCATGACGGCTGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGACACCGGAGTTCGCATTTCTCCTCAACGTCATGCGa < 1:233132/136‑1 (MQ=255) cacTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGAtt < 6:437271/138‑1 (MQ=255) aTTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTc < 8:221066/134‑1 (MQ=255) aTTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTc > 7:221066/1‑134 (MQ=255) aTTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGaa > 8:383116/1‑139 (MQ=255) aTTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGaa > 8:42087/1‑139 (MQ=255) aTTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGaa > 5:352425/1‑139 (MQ=255) aTTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGAATGACAGATGGCTGAACATTAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTAATCATCAACGTCATGCGATTCTgta > 2:4222/1‑136 (MQ=255) tataAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAata > 3:254351/1‑139 (MQ=255) taAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCg < 7:125972/97‑1 (MQ=255) taAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCg > 8:125972/1‑97 (MQ=255) taAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAatat < 7:488422/138‑1 (MQ=255) aaCATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCg < 1:456201/102‑1 (MQ=255) aaCATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATAtctc > 5:82101/1‑139 (MQ=255) aTTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGtt < 6:473655/139‑1 (MQ=255) ttACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTa < 1:500261/103‑1 (MQ=255) ttACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTActcct > 5:46078/1‑108 (MQ=255) ttACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTActcct < 6:46078/108‑1 (MQ=255) ttACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCa < 4:115137/110‑1 (MQ=255) ttACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGtt > 5:145833/1‑138 (MQ=255) ttACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACAAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGATCGCATTACTCCTCAACGTCATGCGATTCTGGAATAACTCGtt > 5:230890/1‑138 (MQ=255) tACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGa < 8:350000/92‑1 (MQ=255) tACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGa > 7:350000/1‑92 (MQ=255) tACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTaa > 6:309273/1‑139 (MQ=255) tACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTaa > 3:222359/1‑139 (MQ=255) tACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTa > 4:285211/1‑138 (MQ=255) aCAATGTAAGTATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAat < 8:185538/128‑1 (MQ=255) aCAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAat > 7:185538/1‑128 (MQ=255) aCAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAAc > 5:491363/1‑139 (MQ=255) tGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAatat > 6:48569/1‑126 (MQ=255) gTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTAt > 4:494398/1‑139 (MQ=255) aaGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCACTACTCCTCAACGTCATGCGATTCTGGAATATCTCGtt < 3:4951/129‑1 (MQ=255) aGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGc < 6:366732/139‑1 (MQ=255) aGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGc < 4:254351/139‑1 (MQ=255) gAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTa > 4:307179/1‑92 (MQ=255) tttAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCaa < 3:459025/138‑1 (MQ=255) agaagaGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGc > 4:23963/1‑139 (MQ=255) aagaGAGGTGCATGACGGATTGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCgg < 5:309273/139‑1 (MQ=255) cgagagGTGCATGACGGATGGGTGCACATGAACTAATAGAAGCCTTAGATACGGTGGAGGAACCCGGAGTTCGCATTACTCCTCAACGTGATGCGATTCTGGAATATGTCGTTATCTCTATGGCTCATCCTACAGCGGa < 6:230890/138‑1 (MQ=255) agGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGat < 3:292139/139‑1 (MQ=255) agGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGat < 3:340091/139‑1 (MQ=255) agGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGat < 4:3571/139‑1 (MQ=255) agGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGat < 3:407530/139‑1 (MQ=255) tttGCATGAAGGTTGTCTTCATATGAACTAAAAGATTCATTAGATATGTTGGAGTTAATCGGAGTTCTCATTACTAATCAACTTATTGAGATTTTTTAATATCTCGTTATCTCTATGGCTCATCCAACAGCGGAGGat < 2:113106/136‑1 (MQ=255) cATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGtt > 2:355043/1‑104 (MQ=255) cATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGtt < 1:355043/104‑1 (MQ=255) cATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGatatata > 6:295039/1‑139 (MQ=255) tGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATg > 1:88707/1‑111 (MQ=255) tGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATg < 2:88707/111‑1 (MQ=255) tGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCACCAGCGGACGatatatat > 1:285230/1‑138 (MQ=255) tGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGAtatatata < 6:85390/139‑1 (MQ=255) gACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGAGGACGAtatatata > 1:113106/1‑138 (MQ=255) aTGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCAGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGctc > 4:386316/1‑139 (MQ=255) cacaTGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGtt > 4:314090/1‑89 (MQ=255) cacaTGAACTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAg < 8:87659/138‑1 (MQ=255) aCTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAg > 3:30840/1‑104 (MQ=255) aCTAAAAGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAAtt > 4:443179/1‑138 (MQ=255) aaaaGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTcc > 6:495941/1‑138 (MQ=255) aaaaGAAGCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCt < 4:87211/139‑1 (MQ=255) agCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGaa < 4:137537/126‑1 (MQ=255) agCCTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGaa > 3:137537/1‑126 (MQ=255) ccTTAGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAg > 3:108697/1‑139 (MQ=255) aGAAACGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCg > 3:93581/1‑137 (MQ=255) aCGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACTATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGa < 2:372035/139‑1 (MQ=255) aCGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGa < 4:398931/139‑1 (MQ=255) aCGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGa < 7:38206/139‑1 (MQ=255) aCGTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGa < 6:111526/139‑1 (MQ=255) aCGTTGGAGCAAACCGGAGTTCGCATAACTCCTCAACGTCATGCGAATCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGAAATATATAAAGCACTGGAAGGGAAATTTCCTAACATGagcgaagcga < 7:54855/139‑1 (MQ=255) gTTGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTTGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACg < 3:443179/139‑1 (MQ=255) ttGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGat > 8:341573/1‑90 (MQ=255) ttGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGat < 7:341573/90‑1 (MQ=255) ttGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACg < 2:191511/138‑1 (MQ=255) ttGGAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACg > 1:191511/1‑138 (MQ=255) | TACCCTGATATCAATTGACAAATTATCGTAGAAAGAGTTACACTAATTATAAACATTACAATGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACG > BS168_reference_genome/944390‑944660 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |