| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BS168_reference_genome | 4,066,077 | A→G | 5.8% | intergenic (+115/‑133) | cotNE → / → yxeD | inner spore coat protein/conserved protein of unknown function |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 4,066,077 | 0 | A | G | 5.8% | 212.4 / 2.9 | 69 | intergenic (+115/‑133) | cotNE/yxeD | inner spore coat protein/conserved protein of unknown function |
| Reads supporting (aligned to +/- strand): ref base A (28/37); new base G (2/2); total (30/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.56e-01 | |||||||||||
CAGGGGAAGGCGGTTTCTGAGCGAAACAAAGAAAAAAAGCGGAATACGATTCTCCCATCTCAGGGTTTCGTTTTCCGCATTTCTTATATGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATCGATACATGGAGGGATCATTCATGCA > BS168_reference_genome/4065943‑4066214 | cAGGGGAAGGCGGTTTCTGAGCGAAACAAAGAAAAAAAGCGGAATACGATTCTCCCATCTCAGGGTTTCGTTTTCCGCATTTCTTATATGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATc < 1:226860/138‑1 (MQ=255)cAGGGGAAGGCGGTTTCTGAGCGAAACAAAGAAAAAAAGCGGAATACGATTCTCCCATCTCAGGGTTTCGTTTTCCGCATTTCTTATATGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCt > 4:120006/1‑139 (MQ=255) ggggAAGGCGGTTTCTGAGCGAAACAAAGAAAAAAAGATGAATACGATTCTCCCATCTCAGGGTTTCGTTTTCCGCATTTCTTATATGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCtt > 2:235228/1‑138 (MQ=255) gggAAGGCGGTTTCTGAGCGAAACAAAGAAAAAAAGCGGAATACGATTCTCCCATCTCAGGGTTTCGTTTTCCGCATTTCTTATATGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTa > 1:117745/1‑139 (MQ=255) aaGGCGGTTTCTGAGCGAAACAAAGAAAAAAAGCGGAATACGATTCTCCCATCTCAGGGTTTCGTTTTCCGCATTTCTTATATGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCAAGTATACAATCTTTACCg > 6:96765/1‑139 (MQ=255) gCGGTTTCTGAGCGAAACAAAGAAAAAAAGCGGAATACGATTCTCCCATCTCAGGGTTTCGTTTTCCGCATTTCTTATATGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGttt < 5:83568/139‑1 (MQ=255) tttCTGAGCGAAACAAAGAAAAAAAGCGGAATACGATTCTCCCATCTCAGGGTTTCGTTTTCCGCATTTCTTATATGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACGGTTttctt > 7:156596/1‑137 (MQ=255) cTGAGCGAAACAAAGAAAAAAAGCGGAATACGATTCTCCCATCTCAGGGTTTCGTTTTCCGCATTTCTTATATGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTttcattc < 4:314945/138‑1 (MQ=255) aGCGAAACAAAGAAAAAAAGCGGAATACGATTCTCCCATCTCAGGGTTTCGTTTTCCGCATTTCTTATATGTTAAAACGGAACATTTACATAAATAGGGTTTGTACCCAGTATACAATCTTTACCGTTttcattca > 7:9506/1‑136 (MQ=255) aaaCAAAGAAAAAAAGCGGAATACGATTCTCCCATCTCAGGGTTTCGTTTTCCGCATTTCTTATATGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATag < 1:23554/139‑1 (MQ=255) aGAAAAAAAGCGGAATACGATTCTCCCATCTCAGGGTTTCGTTTTCCGCATTTCTTATATGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGc > 5:182021/1‑139 (MQ=255) gAAAAAAAGCGGAATACGATTCTCCCATCTCAGGGTTTCGTTTTCCGCATTTCTTATATGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCt < 7:300039/139‑1 (MQ=255) aaaaGCGGAATACGATTCTCCCATCTCAGGGTTTCGTTTTCCGCATTTCTTATATGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATagag < 7:305450/130‑1 (MQ=255) aaaaGCGGAATACGATTCTCCCATCTCAGGGTTTCGTTTTCCGCATTTCTTATATGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATagag > 8:305450/1‑130 (MQ=255) aaaaGCGGAATACGATTCTCCCATCTCAGGGTTTCGTTTTCCGCATTTCTTATATGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAgg < 7:134020/139‑1 (MQ=255) aaGCGGAATACGATTCTCCCATCTCAGGGTTTCGTTTTCCGCATTTCTTATATGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGaa < 7:132754/139‑1 (MQ=255) gAATACGATTCTCCCATCTCAGGGTTTCGTTTTCCGCATTTCTTATATGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTttca > 4:264481/1‑110 (MQ=255) gAATACGATTCTCCCATCTCAGGGTTTCGTTTTCCGCATTTCTTATATGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTttca < 3:264481/110‑1 (MQ=255) tACGATTCTCCCATCTCAGGGTTTCGTTTTCCGCATTTCTTATATGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTg < 6:259716/139‑1 (MQ=255) tcCCATCTCAGGGTTTCGTTTTCCGCATTTCTTATATGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTcc > 5:31220/1‑138 (MQ=255) tcCCATCTCAGGGTTTCGTTTTCCGCATTTCTTATATGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCct > 7:5544/1‑139 (MQ=255) tcCCATCTCAGGGTTTCGTTTTCCGCATTTCTTATATGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCct > 5:122734/1‑139 (MQ=255) tcCCATCTCAGGGTTTCGTTTTCCGCATTTCTTATATGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCct > 8:104027/1‑139 (MQ=255) tctcAGGGTTTCGTTTTCCGCATTTCTTATATGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACGATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCttt > 7:290148/1‑138 (MQ=255) tctcAGGGTTTCGTTTTCCGCATTTCTTATATGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACACAGTATACGAACATTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCttt > 7:295069/1‑138 (MQ=255) ggTTTCGTTTTCCGCATTTCTTATATGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGaa > 3:297729/1‑139 (MQ=255) tttCTTATATGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAg < 6:31220/139‑1 (MQ=255) atatGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTg < 3:300593/136‑1 (MQ=255) atatGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTg < 3:129828/136‑1 (MQ=255) atatGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTg < 3:120006/136‑1 (MQ=255) atatGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTg < 2:28935/136‑1 (MQ=255) atatGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTg < 2:117745/136‑1 (MQ=255) ttAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGTGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTATTTTCATTCAAGTTGCATGataa > 8:29982/1‑139 (MQ=255) ttAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGataa > 2:42133/1‑139 (MQ=255) aaaCGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATAc > 3:356667/1‑139 (MQ=255) aaaCGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATAc < 6:182021/139‑1 (MQ=255) aaCATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTATCATTAAAAGAAAGAGGGGCTCAGGAAAATAATTCAAGTTACTCTTTGACGTAAGAACTTTTCATTCAAGAAGCATGATAATACCGACt > 8:57738/1‑138 (MQ=255) cATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCaa < 8:5544/138‑1 (MQ=255) cATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCaa < 6:122734/138‑1 (MQ=255) cATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCaa < 4:297729/138‑1 (MQ=255) cATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAAt < 7:126599/139‑1 (MQ=255) ctAAAAAGGGTGTGTACCCAGTATACAATCTTTACAGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATc < 7:299159/138‑1 (MQ=255) aTAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATc < 4:259588/139‑1 (MQ=255) tAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATc > 2:257243/1‑138 (MQ=255) aaaaGGTGTTGTACCCATTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGATGAGGAAAATAATTGTAGTTCCTCTTTGACGTAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATCGAt < 6:130066/139‑1 (MQ=255) aGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTAAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCATCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCTACTCACGTCAATCGATACa > 6:213895/1‑139 (MQ=255) tttGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGataata < 4:127512/113‑1 (MQ=255) tttGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGataata > 3:127512/1‑113 (MQ=255) tGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATCGATACATGGAgg > 1:82134/1‑139 (MQ=255) cccAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATCGATACATGGAGGGAt < 1:310553/138‑1 (MQ=255) cccAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATCGATACATGGAGGGAt < 5:96765/138‑1 (MQ=255) cccAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATCGATACATGGAGGGAt < 7:155033/138‑1 (MQ=255) cccAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAAAACCGACTCACGTCAATCGATACATGGAGGGAt < 2:185880/138‑1 (MQ=255) cccAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCGGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATCGATACATGGAGGGAt < 6:253831/138‑1 (MQ=255) cAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATCGATACATGGAGGGAtcat > 1:83603/1‑139 (MQ=255) cAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATCGATACATGGAGGGAtcat > 1:99543/1‑139 (MQ=255) cAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATCGATACATGGAGGGAtcat > 5:286926/1‑139 (MQ=255) aGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAGTCGATACATGGAGGGAgcat > 7:165439/1‑138 (MQ=255) gTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATCGATACATGGAGGGAtcattc < 1:235228/139‑1 (MQ=255) tataGATTCTTTACGGTTTTGATTAAATGATAGAGGGGCTGAGGTAAATTATTGTATTTGCTCTTTGACGGATTTTCTTTTGTTTCAAGTTGCATGATAATACCGACTCACGTCTATCGTTACATGGAGGGAgcattc < 7:57738/138‑1 (MQ=255) tataCAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATCGATACATGGAGGGAtcattca > 3:274128/1‑139 (MQ=255) tataCAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATCGATACATGGAGGGAtcattc < 2:83603/138‑1 (MQ=255) taCGATCTTTACCGTTTTGATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATCGATACATGGAGGGAtcattcat < 8:295069/138‑1 (MQ=255) taCGATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATCGATACATGGAGGGAtcattcat < 8:290148/138‑1 (MQ=255) taCAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATCGATACATGGAGGGAtcattcat < 7:104027/138‑1 (MQ=255) taCAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATCGATACATGGAGGGAtcattcat < 6:286926/138‑1 (MQ=255) aCAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATCGATAGATGGAGGGATCATTCATg > 5:53373/1‑138 (MQ=255) cAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATCGATACATGGAGGGATCATTCATGCa < 4:356667/139‑1 (MQ=255) cAATCTTTACCG‑TGTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATCGATACATGGAGGGATCATTCATGCa < 6:86714/138‑1 (MQ=255) aaTCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAAttt > 3:9566/1‑71 (MQ=255) aaTCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAAttt < 4:9566/71‑1 (MQ=255) aaTCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATCGa < 2:72857/115‑1 (MQ=255) aaTCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATCGa > 1:72857/1‑115 (MQ=255) | CAGGGGAAGGCGGTTTCTGAGCGAAACAAAGAAAAAAAGCGGAATACGATTCTCCCATCTCAGGGTTTCGTTTTCCGCATTTCTTATATGTTAAAACGGAACATTTACATAAAAAGGGTTTGTACCCAGTATACAATCTTTACCGTTTTCATTCAAAGATAGAGGGGCTGAGGAAAATAATTGTAGTTCCTCTTTGACGGAATTTCTTTTCATTCAAGTTGCATGATAATACCGACTCACGTCAATCGATACATGGAGGGATCATTCATGCA > BS168_reference_genome/4065943‑4066214 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |