| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BS168_reference_genome | 199,191 | A→C | 13.2% | N232T (AAC→ACC) | glmM → | phosphoglucosamine mutase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 199,191 | 0 | A | C | 13.2% | 150.5 / 2.7 | 68 | N232T (AAC→ACC) | glmM | phosphoglucosamine mutase |
| Reads supporting (aligned to +/- strand): ref base A (29/29); new base C (2/8); total (31/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.70e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCCTTGGCGACACACCTGTTTGCTGATTTAGATGCAGATGTTTCTACAATGGGGACTTCCCCGAACGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGACCAAATCATGTACATATGCTCAAAACATCTGAAATCAGAGGGCCGTTTAAAGGA > BS168_reference_genome/199055‑199326 | tCCTTGGCGACACACCTGTTTGCTGATTTAGATGCAGATGTTTCTACAATGGGGACTTCCCCGAACGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAAcg < 5:166399/139‑1 (MQ=255)tCCTTGGCGACACACCTGTTTGCTGATTTAGATGCAGATGTTTCTACAATGGGGACTTCCCCGAACGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAAcg > 3:63772/1‑139 (MQ=255)tCCTTGGCGACACACCTGTTTGCTGATTTAGATGCAGATGTTTCTACAATGGGGACTTCCCCGAACGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAAcg > 3:183779/1‑139 (MQ=255) cTTGGCGACACACCTGTTTGCTGATTTAGATGCAGATGTTTCTACAATGGGGACTTCCCCGAACGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAAcgcg < 4:183779/139‑1 (MQ=255) ggCGACACACCTTTTTGCTGAGTTAGATGCAGATGTTTCTACAATGGGGAATTCCCCGAACGGATTAAACATTAATGACGGCGTCGGTTCGAATCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGa > 8:7401/1‑138 (MQ=255) ggCGACACACCTGTTTGCTGATTTAGATGCAGATGTTTCTACAATGGGGACTTCCCCGAACGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGCAAAACGCGGAt > 5:32428/1‑139 (MQ=255) ggCGACACACCTGTTTGCTGATTTAGATGCAGATGTTTCTACAATGGGGACTTCCCCGAACGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAACCGCGGa > 1:353969/1‑138 (MQ=255) ggCGACACACCTGTTTGCTGATTTAGATGCAGATGTTTCTACAATGGGGACTTCCCCGAACGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGAt > 7:352177/1‑139 (MQ=255) cGACACACCTGTTTGCTGATTTAGATGCAGATGTTTCTACAATGGGGACTTCCCCGAACGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGAtct < 7:46856/139‑1 (MQ=255) cGACACACCTGTTTGCTGATTTAGATGCAGATGTTTCTACAATGGGGACTTCCCCGAACGGATTAAACATTAATGACGGCGGCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGAtct < 8:105998/139‑1 (MQ=255) acacacCTGTTTGCTGATTTAGATGCAGATGTTTCTACAATGGGGACTTCCCCGAACGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGAtctct > 1:351967/1‑138 (MQ=255) ccTGTTTGCTGATTTAGATGCAGATGTTTCTACAATGGGGACTTCCCCGAACGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGACAAAACCGCGGATCTCGGTCtt < 5:291311/139‑1 (MQ=255) gCTGATTTAGATGCAGATGTTTCTACAATGGGGACTTCCCCGAACGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTc < 8:42344/138‑1 (MQ=255) tGATTTAGATGCAGATGTTTCTACAATGGGGACTTCCCCGAACGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGCAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGAc > 1:258404/1‑139 (MQ=255) tGATTTAGATGCAGATGTTTCTACAATGGGGACTTCCCCGAACGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGAc > 1:194352/1‑139 (MQ=255) tGATTTAGATGCAGATGTTTCTACAATGGGGACTTCCCCGAACGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGAc > 1:210617/1‑139 (MQ=255) aTTTAGATGCAGATGTTTCTACAATGGGGACTTCCCCGAACGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGCTCTCGGTCTTGCGTTCGACgg > 5:355695/1‑139 (MQ=255) aGATGCAGATGTTTCAACAATGGGGACTTCCCCGAACGGATTAACCATTAATGACGGCGGCGGTGCGACGCATCCCGACGCGCGCAGCGCGTTTGTCAAAGAGAAAACCGCGGATCTCGGTCTTGCGTTCGACGGTGa < 3:122053/138‑1 (MQ=255) aGATGTTTCTACATTGGGGACTTCCCCGAACGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGAc < 4:352939/139‑1 (MQ=255) aGATGTTTCTACAATGGGGACTTCCCCGAACGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGAc < 3:182432/139‑1 (MQ=255) tCTACAATGGGGACTTCCCCGAACCGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGc > 8:111948/1‑135 (MQ=255) cattgtggACTTCCCCTTACGTATATAACATTAATGACGGCGGGGGGGCGTCTAACCCCGATGGGCTCAGGGCTTTTGTCATATCTAAAAAGGCTGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTg < 8:173899/132‑1 (MQ=255) tGGGGACTTCCCCGAACGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGt > 8:334639/1‑139 (MQ=255) ggggACTTCCCCGAACGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTc > 5:41465/1‑139 (MQ=255) ttCCCCGAACGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGa > 2:94971/1‑138 (MQ=255) ttCCCCGAACGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGCGACGGCGACCGCCTGATTGCTGTCGATGa > 8:290552/1‑138 (MQ=255) tCCCCGAACGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTATGTCAAACACAAAACCTCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCAGAATGCGGTCGATGaa > 5:235051/1‑138 (MQ=255) ccccTAACGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGaaaa < 4:61703/139‑1 (MQ=255) cccGAACGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGaaaaa < 7:301635/139‑1 (MQ=255) cGAACGGTTTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCGCAGCGCTTTTGTCAAAGAGAAAACCGCGGTTCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAgg < 6:180525/139‑1 (MQ=255) cGAACGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAgg < 8:164734/139‑1 (MQ=255) cGAACGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAgg < 7:188629/139‑1 (MQ=255) aaCGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAGGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGa > 5:83620/1‑138 (MQ=255) aaCGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGCGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGaa < 7:290552/139‑1 (MQ=255) ggATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAata < 2:194352/139‑1 (MQ=255) aTTAAACATTAATGACGGCGTCGGTTCGACTCGTCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATAtt > 8:298548/1‑139 (MQ=255) tAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCGGATTGCTGTCGATGAATAAGGAAATATTGTAGACGGc > 2:249410/1‑139 (MQ=255) tAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCACCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGc > 4:304425/1‑139 (MQ=255) ccGGCGTCGGTTCGACTCATCCCGAAGCGCCCAGCGCGTTTGTCAAAGACAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGAcc < 5:10772/137‑1 (MQ=255) ggggtgggTTCGACTCATCCCGAAGCGCTCAGGGCGTTTGTAAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGACCaaa < 8:352177/133‑1 (MQ=255) ggcggcGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGAGGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGACCaaa < 6:60081/139‑1 (MQ=255) ggCGTGGGTTGGACTCATCCCTTAGCGCTCAGCGCGTTTGTCAAAGAGAAAACGGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATTTTGTAGACGGCGACCaaa < 5:279571/139‑1 (MQ=255) ggCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATTAAAAAGGAAAAATTTTAGACGGCGCCCac > 2:170292/1‑137 (MQ=255) ggCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGAcc > 4:350215/1‑136 (MQ=255) ggCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGAcc < 3:350215/136‑1 (MQ=255) ggCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGACCaaa < 4:157481/139‑1 (MQ=255) ggCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGACCaaa < 6:181304/139‑1 (MQ=255) ggCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTATTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGACCaaa > 3:214181/1‑139 (MQ=255) cGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGGCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGACCAAATc < 8:114990/139‑1 (MQ=255) cGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAACCGCGGATCTCGGGCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGACCAAATCATg < 4:343320/139‑1 (MQ=255) aCTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGACCAAATCATGTACatat > 1:18659/1‑139 (MQ=255) cccGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGACTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGaa < 4:148382/100‑1 (MQ=255) cccGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGACTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGaa > 3:148382/1‑100 (MQ=255) cGACGCGCTCAGCGCGTTTGTAAAAGAGAAAACCGCGGATCTCGGTCTTGCGTTCGACGGGGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGACCAAATCATGTACATATGCTCaaaa < 3:120374/139‑1 (MQ=255) aGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGACCAAATCATGTACATATGCTCAAAACAt > 5:366408/1‑139 (MQ=255) cTCCGCGCTTTTTGCAACGATAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGACCAAATCATGTACATATGCTCAAAACATCTGa < 6:173984/139‑1 (MQ=255) cTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGACCAAATCATGTACATATGCTCaa > 7:17115/1‑130 (MQ=255) cTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGACCAAATCATGTACATATGCTCaa < 8:17115/130‑1 (MQ=255) tCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGAcc > 1:81872/1‑108 (MQ=255) tCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGAcc < 2:81872/108‑1 (MQ=255) ggggTTTGACAAATAAAAAACCGGGGAGCTCGGTCTGGCGTGGGAGGGTGAGGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGACCAAATCATGTACATATGCTCAAAACATCTGAAATCa < 4:8468/136‑1 (MQ=255) cgcgTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGACCAAATCATGTACATATGCTCAAAACATCTGAAAt > 7:347538/1‑137 (MQ=255) tGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGACCAAATCATGTACATATGCTCAAAACATCTGAAATCAGAGGGc > 7:249442/1‑139 (MQ=255) aaaGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGACCAAATCATGTACATATGCTCAAAACATCTGAAATCAGAGGGCCGtt < 8:347538/139‑1 (MQ=255) ggagaAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGACCAAATCATGTACATATGCTCAAAACATCTGAAATCAGAGGGCCGTTTa < 6:83620/138‑1 (MQ=255) agagAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGACCAAATCATGTACATATGCTCAAAACATCTGAAATCAGAGGGCCGTTTa < 3:156641/139‑1 (MQ=255) cgaAAACCGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTTATTGCTGTCGATGAAAAAGTAAATATTGTAGACGGCGACCAAATCATGTACATATGCTCAAAACATCTGAAATCAGAGGGCCGTTTaaa < 5:79836/138‑1 (MQ=255) gaAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGACCAAATCATGTACATATGCTCAAAACATCTGAAATCAGAGGGCCGTTTaaa < 6:366408/138‑1 (MQ=255) aacaCGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGACCAAATCATGTACATATGCTCAAAACATCTGAAATCAGAGGGCCGTTTAAAGga < 5:37357/136‑1 (MQ=255) aaatCGCGGATCTAGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGACCAAATCATGTACATATGCTCAAAACATCTGAAATCAGAGGGCCGTTTAAAGga < 7:111948/139‑1 (MQ=255) aaacCGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTTATTGCTGTCGATGAAAAAGTAAATATTGTAGACGGCGACCAAATCATGTACATATGCTCAAAACATCTGAAATCAGAGGGCCGTTTAAAGga < 4:214181/139‑1 (MQ=255) aaaaCGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGACCAAATCATGTACATATGCTCAAAACATCTGAAATCAGAGGGCCGTTTAAAGga < 2:18659/139‑1 (MQ=255) aaaaCGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGACCAAATCATGTACATATGCTCAAAACATCTGAAATCAGAGGGCCGTTTAAAGga < 6:41465/139‑1 (MQ=255) | TCCTTGGCGACACACCTGTTTGCTGATTTAGATGCAGATGTTTCTACAATGGGGACTTCCCCGAACGGATTAAACATTAATGACGGCGTCGGTTCGACTCATCCCGAAGCGCTCAGCGCGTTTGTCAAAGAGAAAAACGCGGATCTCGGTCTTGCGTTCGACGGTGACGGCGACCGCCTGATTGCTGTCGATGAAAAAGGAAATATTGTAGACGGCGACCAAATCATGTACATATGCTCAAAACATCTGAAATCAGAGGGCCGTTTAAAGGA > BS168_reference_genome/199055‑199326 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |