| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BS168_reference_genome | 944,586 | T→C | 100% | S34P (TCT→CCT) | perR → | transcriptional regulator (Fur family) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 944,586 | 0 | T | C | 95.7% | 317.3 / 1.3 | 91 | S34P (TCT→CCT) | perR | transcriptional regulator (Fur family) |
| Reads supporting (aligned to +/- strand): ref base T (2/2); new base C (36/51); total (38/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
TGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTAAAAGAGCTCACA > BS168_reference_genome/944451‑944714 | tGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTa < 7:174328/139‑1 (MQ=255) tAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATg > 1:252849/1‑139 (MQ=255) aGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGc < 2:970/139‑1 (MQ=255) gAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCt > 7:30044/1‑139 (MQ=255) ttttttttAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAACCCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGATTATCTCGTTAACCATATGGCTCAt > 3:217558/1‑139 (MQ=255) ttttttAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATcc > 8:340197/1‑139 (MQ=255) gaagaGAGGTGCATGACGGATGGCTTCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCg < 1:237897/139‑1 (MQ=255) gaagaGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCg < 7:226241/139‑1 (MQ=255) agagagGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGa < 8:154928/139‑1 (MQ=255) agagagGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGa < 2:106455/139‑1 (MQ=255) gagagGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGAc < 3:216561/139‑1 (MQ=255) agGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGat < 1:128672/139‑1 (MQ=255) gCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTACCCCTATGGCTCATCCAACAGCGGACGatata > 3:287953/1‑138 (MQ=255) cATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGa > 3:200775/1‑130 (MQ=255) cATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGa < 4:200775/130‑1 (MQ=255) cATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGCCGatatata > 8:3741/1‑139 (MQ=255) tGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGAtatatata < 3:161806/139‑1 (MQ=255) cGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAg > 7:188195/1‑139 (MQ=255) cGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAg > 3:176525/1‑139 (MQ=255) aTGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGctc > 7:266356/1‑139 (MQ=255) aTGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGctc > 4:95144/1‑139 (MQ=255) aTGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGctc > 2:298962/1‑139 (MQ=255) cTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTc < 2:294790/139‑1 (MQ=255) aaaGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCt > 8:180262/1‑138 (MQ=255) aaaGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCt < 3:217992/138‑1 (MQ=255) aaaGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCt < 3:213167/138‑1 (MQ=255) aagCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACAt < 1:251692/139‑1 (MQ=255) aagCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACAt < 1:298962/139‑1 (MQ=255) gCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTACCCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACAt > 1:310862/1‑137 (MQ=255) gCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACAt > 7:77735/1‑137 (MQ=255) ccTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAg < 2:122572/139‑1 (MQ=255) aCGTTGAATGAAACCGGAGTTGGCATTAGTCCTCAACGTCATGCGATTCTGGAATATCTAGTTAACCCTATGGCTAATCCAACAGGGGACGATATATATAAAGCGCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGa < 7:3741/139‑1 (MQ=255) aCGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGa < 8:266356/139‑1 (MQ=255) aCGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGa < 7:180262/139‑1 (MQ=255) aCGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGa < 8:305449/139‑1 (MQ=255) aCGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGa < 8:13129/139‑1 (MQ=255) aCGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGa < 1:225647/139‑1 (MQ=255) aCGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGa < 2:130802/139‑1 (MQ=255) aCGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGa < 5:360716/139‑1 (MQ=255) aCGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGa < 2:252849/139‑1 (MQ=255) aCGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGa < 4:176525/139‑1 (MQ=255) aCGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGa < 4:227555/139‑1 (MQ=255) aCGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGa < 8:22114/139‑1 (MQ=255) aCGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGa < 7:340197/139‑1 (MQ=255) gTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGa > 1:239166/1‑137 (MQ=255) gTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGa < 2:239166/137‑1 (MQ=255) gTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACg < 7:68709/139‑1 (MQ=255) gTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACg < 1:195331/139‑1 (MQ=255) gTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACg > 1:198236/1‑139 (MQ=255) gTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACg < 5:35192/139‑1 (MQ=255) gTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACg < 8:30044/139‑1 (MQ=255) gTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACg < 2:14540/139‑1 (MQ=255) gTTGAAGGAAACCGGAGTGCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCGCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACg < 6:107375/139‑1 (MQ=255) cttGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACg < 4:33006/138‑1 (MQ=255) ttGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACgg > 5:328561/1‑139 (MQ=255) gAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGt < 8:188195/138‑1 (MQ=255) aCCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGa > 2:281294/1‑127 (MQ=255) aCCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGa < 1:281294/127‑1 (MQ=255) aCCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAAAATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAAAATGAGCGTAGCGACGGTATATAAc > 6:71785/1‑138 (MQ=255) ccGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAAt < 5:25889/105‑1 (MQ=255) ccGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACACCGGACGATATATATAAAGATCTGGAAGGGAAAt > 6:25889/1‑105 (MQ=255) cGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAAt < 6:328561/139‑1 (MQ=255) gacagCATTAATCCTAATCGTCATGCGATTTTGGAATATCTGGTTAACCCTTTGGCTAATCAAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGc < 4:191663/135‑1 (MQ=255) ttCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCg > 7:239582/1‑139 (MQ=255) cGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCgg < 7:153085/67‑1 (MQ=255) cGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCgg > 8:153085/1‑67 (MQ=255) cGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCgtg > 7:200411/1‑139 (MQ=255) cGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCgtg > 7:104526/1‑139 (MQ=255) gCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGat > 6:134924/1‑71 (MQ=255) gCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGat < 5:134924/71‑1 (MQ=255) aCTCCTCAACGTCATGCGATTCTGGAATATCTCGTAAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTc < 4:217558/138‑1 (MQ=255) ctcAACGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCggg > 1:120455/1‑138 (MQ=255) aaCGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCgtg < 5:182164/126‑1 (MQ=255) aaCGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCgtg > 6:182164/1‑126 (MQ=255) aaCGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAAt > 2:57789/1‑138 (MQ=255) aaCGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATATCCTAACATGAGCGAAGCGACGGTATATAACAATTTGCGTGTGTTCCggctgtc > 3:191663/1‑134 (MQ=255) cGTCATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAg > 4:248773/1‑139 (MQ=255) cATGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATAAATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGtt > 3:284111/1‑139 (MQ=255) tGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCCACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTg > 7:244640/1‑139 (MQ=255) tGCGATTCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGTTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTg > 7:308747/1‑139 (MQ=255) tCTGGAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTaa > 6:116823/1‑137 (MQ=255) ggAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTAAAagag < 8:239582/139‑1 (MQ=255) gAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTAAAagag < 4:177655/138‑1 (MQ=255) gAATATCTCGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTAAAag < 8:77735/136‑1 (MQ=255) aaTATCTCGTTAACCCAATGGCTCATCCAACAGCGGACGATATATATAAAGCTCCGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTAAAAGAGCt < 4:36065/139‑1 (MQ=255) tctcGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTAAAAGAGCTcaca > 7:329419/1‑139 (MQ=255) tctcGTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGATCCGGGAATCAGGTTTGGTAAAAGAGCTcaca > 8:61951/1‑139 (MQ=255) gTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTAAAAGAGCTcaca < 8:329419/135‑1 (MQ=255) gTTAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTAAAAGAGCTcaca < 1:57789/135‑1 (MQ=255) ttAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAg < 8:307235/75‑1 (MQ=255) ttAACCCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAg > 7:307235/1‑75 (MQ=255) | TGTAAGAATTTTTTTTAGAAGAGAGGTGCATGACGGATGGCTGCACATGAACTAAAAGAAGCCTTAGAAACGTTGAAGGAAACCGGAGTTCGCATTACTCCTCAACGTCATGCGATTCTGGAATATCTCGTTAACTCTATGGCTCATCCAACAGCGGACGATATATATAAAGCTCTGGAAGGGAAATTTCCTAACATGAGCGTAGCGACGGTATATAACAATTTGCGTGTGTTCCGGGAATCAGGTTTGGTAAAAGAGCTCACA > BS168_reference_genome/944451‑944714 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |