| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BS168_reference_genome | 1,051,605 | T→A | 5.6% | N190Y (AAT→TAT) | spaD ← | spore coat associated protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 1,051,605 | 0 | T | A | 5.6% | 232.1 / 2.6 | 71 | N190Y (AAT→TAT) | spaD | spore coat associated protein |
| Reads supporting (aligned to +/- strand): ref base T (39/28); new base A (2/2); total (41/30) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01 | |||||||||||
GACTTTTTTGTATGCGCCACAGAGCTCATCTATCAGCTCCACAGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCTTCAATTTTTCGGTTCGGCAAACGGTCATAAACGACGTTCGGCAATGGAACGATTTTTTTCTCCCAGCCGTTTT > BS168_reference_genome/1051468‑1051742 | gACTTTTTTGTATGCGCCACAGAGCTCATCTATCAGCTCCACAGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTttatt < 3:309723/138‑1 (MQ=255) aCTTTTTTGTATGCGCCACAGAGCTCATCTATCAGCTCCACAGCCGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCGTTTTAGAGCAAGTGATGATCGTTCCATTTATTGAAAAACGTTttatta > 5:306094/1‑138 (MQ=255) aCTTTTTTGTATGCGCCACAGAGCTCATCTATCAGCTCCACAGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCGGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTttatta > 4:49028/1‑138 (MQ=255) ttttGTATGCGCCACAGAGCTCATCTATCAGCTCCACAGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGTTCTTTTTCGAGCTTTTGAAGAACGTTGCATTTATTTATATACGTTTTATTTAAcaa > 3:256993/1‑137 (MQ=255) ttttGTATGCGCCACAGAGCTCATCTATCAGCTCCACAGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAAcc > 3:196035/1‑138 (MQ=255) ttttGTATGCGCCACAGAGCTCATCTATCAGCTCCACAGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCa > 3:95514/1‑139 (MQ=255) ttttGTATGCGCCACAGAGCTCATCTATCAGCTCCACAGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCa > 7:141692/1‑139 (MQ=255) ttttGTATGCGCCACAGAGCTCATCTATCAGCTCCACAGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCa > 5:63225/1‑139 (MQ=255) ttttGTATGCGCCACAGAGCTCATCTATCAGCTCCACAGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAAAGTTTTATTAAAcc > 3:266338/1‑138 (MQ=255) ttGTATGCGCCACAGAGCTCATCTATCAGCTCCACAGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCAt < 6:118341/138‑1 (MQ=255) tGTATGCGCCACAGAGCTCATCTATCAGCTCCACAGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATg < 3:220893/138‑1 (MQ=255) tATGCGCCACAGAGCTCATCTATCAGCTCCACAGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATggg < 4:95514/138‑1 (MQ=255) tGCGCCACAGAGCTCATCTATCAGCTCCACAGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCGGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGAt < 3:49028/138‑1 (MQ=255) gcCACAGCGCTCATCTATCAGCTCCACAGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGa > 8:157482/1‑139 (MQ=255) agCTCATCTATCAGCTCCACAGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAAACATTGGATCTGATATTCAt > 4:261834/1‑139 (MQ=255) aTCTATCAGCTCCACAGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTGGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTTAACCATTGGATCTGATATTCATCGAt > 2:130950/1‑138 (MQ=255) aTCTATCAGCTCCACAGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGCACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGAt > 6:192685/1‑138 (MQ=255) aTCTATCAGCTCCACAGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGAt > 7:10330/1‑123 (MQ=255) aTCTATCAGCTCCACAGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGAt < 8:10330/123‑1 (MQ=255) tCAGCTCCACAGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGcc < 5:306207/138‑1 (MQ=255) tCAGCTCCACAGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGcc < 5:126978/138‑1 (MQ=255) tCAGCTCCACAGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGc < 4:196035/137‑1 (MQ=255) tCAGCGCCACAGCCGGTGTCAGCTCGGATCTAGGCAAAACGGGTGCCGTTCTTGGATATTATTCGTGCTCTTGATGCAGGTTCCATTTTTTGTCGGACGTGTTATTGAAACATGGGATCTGATATTCTTCGCTCAGCct > 6:272406/1‑139 (MQ=255) tCCACAGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATg > 7:157405/1‑109 (MQ=255) tCCACAGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATg < 8:157405/109‑1 (MQ=255) tCCACAGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCtttt > 3:223345/1‑139 (MQ=255) tCCACAGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCtttt > 5:112321/1‑139 (MQ=255) cacaGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGCACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCtttttt > 8:266756/1‑139 (MQ=255) cacaGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGATCGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCct < 2:12896/132‑1 (MQ=255) cacaGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGATCGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCct > 1:12896/1‑132 (MQ=255) cacaGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCtttttt > 1:115057/1‑139 (MQ=255) cacaGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCtttt < 1:291177/137‑1 (MQ=255) aGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTa < 8:141692/139‑1 (MQ=255) aGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTa < 6:63225/139‑1 (MQ=255) gACGGTTTCAGCTCGTATCTAGTCAAAATTGGTGCCTTTCTTGGATCTTTTTAGAGCAATTGATGAAAGTTCTTTTTATTGAAATATGTTTTATTAAATCATGGTATCTGATATTCATCGATCAGCCTCTTTTTTGTa < 4:256993/138‑1 (MQ=255) ggTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGAt < 8:177316/104‑1 (MQ=255) ggTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGAt > 7:177316/1‑104 (MQ=255) ggTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTa > 7:112222/1‑135 (MQ=255) ggTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTa < 8:112222/135‑1 (MQ=255) gtCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTa > 4:125089/1‑132 (MQ=255) gtCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTa < 3:125089/132‑1 (MQ=255) gtCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGc > 5:95704/1‑138 (MQ=255) ggATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATAAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGt > 7:224534/1‑139 (MQ=255) ggATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATAAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGt > 7:219127/1‑139 (MQ=255) gATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTa < 1:60091/123‑1 (MQ=255) gATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTa > 2:60091/1‑123 (MQ=255) gATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGt > 5:159947/1‑138 (MQ=255) gATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGt > 7:8000/1‑138 (MQ=255) gATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTg > 4:26088/1‑139 (MQ=255) aGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCt > 1:122233/1‑139 (MQ=255) aGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCt > 5:50907/1‑139 (MQ=255) ggCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAg > 1:93562/1‑104 (MQ=255) ggCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAg < 2:93562/104‑1 (MQ=255) aaaGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCTTGAAtt > 4:316160/1‑139 (MQ=255) aaaGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCTTCAAtt > 8:236318/1‑139 (MQ=255) tGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCTTCAATTTttcgg > 2:265817/1‑139 (MQ=255) tGCCGTTCGTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTGTTTTTTGTATGTTGCAAGAGAAGTGAATGTTGAATTTttggg > 1:124416/1‑139 (MQ=255) ggATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCTTCAATTTTTCGGTTCGGCaaa < 2:122233/138‑1 (MQ=255) ggATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCTTCAATTTTTCGGTTCGGCaaa < 8:188320/138‑1 (MQ=255) ggATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCTTCAATTTTTCGGTTCGGCaaa < 7:157482/138‑1 (MQ=255) ggATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCTTCAATTTTTCGGTTCGGCaaa < 6:50907/138‑1 (MQ=255) ggATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATAAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCTTCAATTTTTCGGTTCGGCaaa < 8:219127/138‑1 (MQ=255) ggATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATAAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCTTCAATTTTTCGGTTCGGCaaa < 8:224534/138‑1 (MQ=255) tttCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCTTCAATTTTTCGGTTCGGCAAACGGTCAt < 2:115057/138‑1 (MQ=255) tttCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCTTCAATTTTTCGGTTAGGCAAACGGTCAt > 1:288473/1‑138 (MQ=255) tttCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCTTCAATTTTTAGGTTAGGCAAAAGGtact > 1:87230/1‑135 (MQ=255) aGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCTTCAATTTTTCGGTTCGGCAAACGGTCATAAacga > 3:360896/1‑139 (MQ=255) tgaACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCTTCAATTTTTCGGTTCGGCAAACGGTCATAAACGACGTTCGGCa < 7:196046/139‑1 (MQ=255) aCGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCTTCAATTTTTCGGTTCGGCAAACGGTCATAAACGACGTTCGGCAATg > 4:160164/1‑139 (MQ=255) ttCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCTTCAATTTTTCGGTTCGGCAAACGGTCATAAACGACGTTCGGCAATGGaa > 8:53979/1‑139 (MQ=255) aTTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCTTCGATTTTTCGGTTCGGGAAACGGGCATAAACGACGTTCGGCAATGGAACGAttttt > 8:248166/1‑139 (MQ=255) aaaCGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCTTCAATTTTTCGGTTCGGCAAACGGTCATAAACGACGTTCGGCAATGGAACGATTTTTTTCTcc < 7:236318/139‑1 (MQ=255) aCGTTTTATTAAACGATGGGATCTGATATTCATCGATGAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCTTCTATTTTTCGGTTCGGCAAACGGTCATAAACGACGTTCGGCATTGGAACGATTTTTTTCTCCCa < 7:72172/139‑1 (MQ=255) aCGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCTTCAATTTTTCGGTTCGGCAAACGGTCATAAACGACGTTCGGCAATGGAACGATTTTTTTCTCCCa < 3:26088/139‑1 (MQ=255) attaAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCTTCAATTTTTCGGTTCGGCAAACGGTCATAAACGACGTTCGGCAATGGAACGATTTTTTTCTCCCAGCCGtt < 8:8000/138‑1 (MQ=255) attaAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCTTCAATTTTTCGGTTCGGCAAACGGTCATAAACGACGTTCGGCAATGGAACGATTTTTTTCTCCCAGCCGtt < 6:159947/138‑1 (MQ=255) ttaAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCTTCAATTTTTCGGTTCGGCAAACGGTCATAAACGACGTTCGGCAATGGAACGATTTTTTTCTCCCAGCCGtttt < 5:192685/139‑1 (MQ=255) ttaAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCTTCAATTTTTCGGTTCGGCAAACGGTCATAAACGACGTTCGGCAATGGAACGATTTTTTTCTCCCAGCCGtttt < 1:81864/139‑1 (MQ=255) ttaAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCTTCAATTTTTCGGTTCGGCAAACGGTCATAAACGACGTTCGGCAATGGAACGATTTTTTTCTCCCAGCCGtttt < 2:288473/139‑1 (MQ=255) ttaAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCTTCAATTTTTCGGTTCGGCAAACGGGCATAAACGACGTTCGGCAATGGAACGATTTTTTTCTCCCAGCCGtttt < 1:130950/139‑1 (MQ=255) | GACTTTTTTGTATGCGCCACAGAGCTCATCTATCAGCTCCACAGACGGTGTCAGCTCGGATCTAGGCAAAAAGGGTGCCGTTCTTGGATCTTTTTCGAGCAATTGATGAACGTTCCATTTATTGAAAAACGTTTTATTAAACCATGGGATCTGATATTCATCGATCAGCCTCTTTTTTGTATGTTGCAAGAGAAGTGAATCTTCAATTTTTCGGTTCGGCAAACGGTCATAAACGACGTTCGGCAATGGAACGATTTTTTTCTCCCAGCCGTTTT > BS168_reference_genome/1051468‑1051742 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |