| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BS168_reference_genome | 1,174,075 | A→T | 5.6% | D248V (GAT→GTT) | slpS → | 2‑phospho‑3‑sulfolactate synthase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 1,174,075 | 0 | A | T | 5.6% | 219.7 / 3.3 | 71 | D248V (GAT→GTT) | slpS | 2‑phospho‑3‑sulfolactate synthase |
| Reads supporting (aligned to +/- strand): ref base A (36/31); new base T (2/2); total (38/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.73e-01 | |||||||||||
ACAGGCTGATTTTTGAAGCGCCTAACAAAACGCTTCAGCAAGGGTTTATTCAAAAAATCGGGCCGAATGTGAATCTTGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATGGCGGTACATAGGCGTGAGATAGGGAAGTGAGGTCAGGCGGATGTTGTAGATGAAGTCGATGACTCT > BS168_reference_genome/1173937‑1174213 | aCAGGCTGATTTTTGAAGCGCCTAACAAAACGCTTCAGCAAGGGTTTATTCAAAAAATCGGGCCGAATGTGAATCTTGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGa < 2:117458/139‑1 (MQ=255) gCTGATTTTTGAAGCGCCTAACAAACCGCTTCAGCAAGGGTTTATTCAAAAAATCGGGCCGAATGTGAATCTTGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATAcc > 7:161701/1‑139 (MQ=255) gCTGATTTTTGAAGCGCCTAACAAAACGCTTCAGCAAGGGTTTATTCAAAAAATCGTGCCGAATGTGAATCTTGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATAcc > 8:250636/1‑139 (MQ=255) gCTGATTTTTGAAGCGCCTAACAAAACGCTTCAGCAAGGGTTTATTCAAAAAATCGGGCCGAATGTGAATCTTGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGTTAcc > 7:23034/1‑139 (MQ=255) gCTGATTTTTGAAGCGCCTAACAAAACGCTTCAGCAAGGGTTTATTCAAAAAATCGGGCCGAATGTGAATCTTGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGTTAcc > 7:17661/1‑139 (MQ=255) gCTGATTTTTGAAGCGCCTAACAAAACGCTTCAGCAAGGGTTTATTCAAAAAATCGGGCCGAATGTGAATCTTGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATAcc > 3:274567/1‑139 (MQ=255) aTTTTTGAAGCGCCTAACAAAACGCTTCAGCAAGGGTTTATTCAAAAAATCGGGCCGAATGTGAATCTTGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCtttt > 8:56404/1‑139 (MQ=255) gCTTCAGCAAGGGTTTATTCAAAAAATCGGGCAGAATGTGAATCTTGCCAATAATCCATTTCATGATGCCATCGCGTAGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTATTTTCTGTAAAATAGCGGCTGCcgg > 6:141367/1‑139 (MQ=255) ttCAGCAAGGGTTTATTCAAAAAATCGGGCCGAATGTGAATCTTGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGc > 7:250066/1‑139 (MQ=255) cAGCAAGGGTTTATTCAAAAAATCGGGCCGAATGTGAATCTTGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGctc > 5:98155/1‑139 (MQ=255) cAGCAAGGGTTTATTCAAAAAATCGGGCCGAATGTGAATCTTGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGctc > 3:67060/1‑139 (MQ=255) agcattggTTTATTCAAATAATCGGGCCGAATGTGAATCTTGCCTATATTCCATTTCATTATGCCTTCTCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATTCCTTTTTTCTGTAAAATAGCGGCTGCGGGGctc < 5:141367/132‑1 (MQ=255) gCAAGGGTTTATTCAAAAAATCGGGCCGAATGTGAATCTTGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGTTACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCtctc < 8:23034/139‑1 (MQ=255) gCAAGGGTTTATTCAAAAAATCGGGCCGAATGTGAATCTTGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGTTACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCtctc < 8:17661/139‑1 (MQ=255) gggTTTATTCAAAAAATCGGGCCGAATGTGAATCTTGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCtttttt < 7:66667/108‑1 (MQ=255) gggTTTATTCAAAAAATCGGGCCGAATGTGAATCTTGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCtttttt > 8:66667/1‑108 (MQ=255) gTTTATTCAAAAAATCGGGCCGAATGTGAATCTTGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCtcgtc < 6:119456/136‑1 (MQ=255) gTTTATTCAAAAAATCGGGCCGAATGTGAATCTTGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCtcgtc > 5:119456/1‑136 (MQ=255) tATTAAAAAAATCGGGCCGAATGTGAATCTTGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCAGCGTTTAGGGCTAAGATCCGATACATTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGaa > 7:224222/1‑138 (MQ=255) ttCAAAAAATCGGGCCGAATGTGAATCTTGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGaa > 4:118625/1‑136 (MQ=255) ttCAAAAAATCGGGCCGAATGTGAATCTTGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAaga < 7:250636/138‑1 (MQ=255) ttCAAAAAATCGGGCCGAATGGGAATCTTGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAagag < 7:220618/139‑1 (MQ=255) aaaaTCGGGCCGAATGTGAATCTTGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGCGccg > 7:53612/1‑138 (MQ=255) aaTCGGGCCGAATGTGAATCTTGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCctct < 7:56404/139‑1 (MQ=255) aaTCTTGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTa < 3:118625/138‑1 (MQ=255) ttGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTAt > 2:6571/1‑135 (MQ=255) ttGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATgg < 1:918/137‑1 (MQ=255) ttGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATgg > 2:918/1‑137 (MQ=255) ttGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGATCTCGTCGTGAATAGAGCCTCTGCGAAATATTTTTTATTGCg > 6:228310/1‑139 (MQ=255) tGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCtcgtc < 6:312673/103‑1 (MQ=255) tGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCtcgtc > 5:312673/1‑103 (MQ=255) tGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATg > 4:153959/1‑135 (MQ=255) tGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATGGCgg > 8:294747/1‑139 (MQ=255) tGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATGGCgg > 2:231531/1‑139 (MQ=255) tGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATGGCgg > 3:144894/1‑139 (MQ=255) gccataatTCCATTTCATGATGCCATGGCGTTGGAAAGGCTGCGTTTAGGGCTAAGAGCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATGGCg < 7:85787/131‑1 (MQ=255) gCCAATTTTCAATTTCATTATGCAATCGCTTTGGAATCGCTGTGTTTAGTGCTAAGATCCTATACCTTTTTTCTGTAAAAAAGCGGCTGCGGGTCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATgg < 3:198481/135‑1 (MQ=255) gCCAATATTCCATTTCTTGATGCCATCGCGTGGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTGTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATgg < 5:228310/135‑1 (MQ=255) gCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATgg < 1:6571/135‑1 (MQ=255) gCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATgg < 3:153959/135‑1 (MQ=255) gCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATgg < 5:332261/135‑1 (MQ=255) gCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGGCGTGAAGAGAGCCGCTGCCTATTATTTTTTATGGCg < 8:74838/137‑1 (MQ=255) gCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTGTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGTAGAGAGCCTCTGCCGATTATTTTTTATTGCggg > 1:307795/1‑138 (MQ=255) gCCAATATTCCATTTCATGATGACTTCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGATCCTCTGCCTATTATTTTTTATGGCg < 8:224222/137‑1 (MQ=255) tatTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATGGCGGTACa > 8:27147/1‑137 (MQ=255) cATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATGGCGGTACATAGGCg < 8:250066/138‑1 (MQ=255) cATTTCATGATGCCATCGAGTTGGAAACGCTGCGTTTAGTGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATGGCGGTACATAGGCg < 7:6309/138‑1 (MQ=255) tCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATGGCGGTACATAGGCGTgag < 4:144894/138‑1 (MQ=255) cgtgatgCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATTGCGGTACATAGGCGTgaga > 5:267752/3‑138 (MQ=255) cATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGATGAGAGCAGCTTCCAATTTTTTTTTTTGGCGGTTCATATGGGTgctat > 4:14496/1‑135 (MQ=255) cATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTTTTTTTTATGGCGGTAGATAGGGGTGAGAt > 5:98865/1‑139 (MQ=255) cATGATGCCATCGCGTCGGAAACGCTGCGTTTCGGGCGACGATCCGATACCTTTTTTCTGTAAAATCGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATGGCGGTACATAGGCGTgaga < 5:357528/138‑1 (MQ=255) atgatgCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTATCCCTATTTTTTTTTATTGCGGTTAAAATGCGGGAGAtt > 2:344533/1‑138 (MQ=255) cATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATGGCGGTACATAGGCGTGAGATAGGGAAGt < 4:67060/139‑1 (MQ=255) cATAGCGTTGGAAACGCTGCGTTTAGGGATAAGATCCGATACCTTTTTTATGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATGGCGGTACATAGGCGTGAGATAGGGAAGt < 6:98155/139‑1 (MQ=255) cgTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATGGCGGTACATAGGCGTGAGATAGGGAAGTGAGGt < 7:294747/139‑1 (MQ=255) ttGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATTGGGGTTCATAGGCGTGGGATAGGGAAGTGAGGt > 2:52254/1‑137 (MQ=255) ggAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATGGCGGTACATAGGCGTGAGATAGGGAAGTGAGGTCAgg > 7:309278/1‑139 (MQ=255) gAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATCGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATGGCGGTACATAGGCGTGAGATAGGGAAGTGAGGTCAGGc < 4:274567/139‑1 (MQ=255) ccGCTGCGTTTAGGGCTACGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATGGCGGTACATAGGCGTGAGATAGGGAAGTGAGGTCAGGCGGa < 1:135829/138‑1 (MQ=255) gCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATGGCGGTACATAGGCGTGAGATAGGGAAGTGAGGTCAGGCGGAtg < 6:267752/139‑1 (MQ=255) ggatAAGAACCGATAACTTTTTTATGTAACATAGCGGCTGCGGGGCTCTCGTCGTGCAGCGAGCCTCGGCCTATTATTTTTTATGGCGGTACATAGGCGTGAGATAGGGAAGTGAGGTCAGGCGGATGTTGTAGATGaa < 1:151476/136‑1 (MQ=255) tAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATGGCGGTACATAGGCGTGAGATAGGGAAGTGAGGTCAGGCGGa > 5:248931/1‑123 (MQ=255) tAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATGGCGGTACATAGGCGTGAGATAGGGAAGTGAGGTCAGGCGGa < 6:248931/123‑1 (MQ=255) aGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATGGCGGTACATAGGCGTGAGATAGGGAAGTGAGGTCAGGCGGATGTTGTAGATGAAGTCGa > 8:213973/1‑139 (MQ=255) aGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATGGCGGTACATAGGCGTGAGATAGGGAAGTGAGGTCAGGCGGATGTTGTAGATGAAGTCGa > 6:125332/1‑139 (MQ=255) aGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATGGCGGTACATAGGCGTGAGATAGGGAAGTGAGGTCAGGCGGATGTTGTAGATGAAGTCGa > 2:81530/1‑139 (MQ=255) aGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATGGCGGTACATAGGCGTGAGATAGGGAAGTGAGGTCAGGCGGATGTTGTAGATGAAGTCGa > 7:344503/1‑139 (MQ=255) gATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATGGCGGTACATAGGCGTGAGATAGGGAAGTGAGGTCAGGCGGATGTTGTAGATGAAGTCGAt < 4:112571/139‑1 (MQ=255) tCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATGGCGGTACATAGGCGTGAGATAGGGAAGTGAGGTCAGGCGGATGTTGTAGATGAAGTCGATGa < 1:231531/139‑1 (MQ=255) cGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCGATTATTTTTTATTGCGGTTCATAGGCGTGATATATGGAAGTGAGGTCAGGCGGATGTTGTAGATGAATTAGATGAct > 6:207735/1‑139 (MQ=255) gATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTAGTCGTGAAGAGAGCCTCTGCCAATTATTTTTTTTGGCGGTACATAGGAGTGAGATACGGAAGAGAGGTCAGGCTGATGTTGTAGATGAAGTCGATGActg > 7:280226/1‑138 (MQ=255) aTACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGCGCCGCTGGCTATTATTTTTTATGGCGGTACATAGGCGTGAGATAGGGAAGTGAGGTCCGGCGGATGTTGTAGATTAAGTCGATGCctct > 5:105221/1‑139 (MQ=255) | ACAGGCTGATTTTTGAAGCGCCTAACAAAACGCTTCAGCAAGGGTTTATTCAAAAAATCGGGCCGAATGTGAATCTTGCCAATATTCCATTTCATGATGCCATCGCGTTGGAAACGCTGCGTTTAGGGCTAAGATCCGATACCTTTTTTCTGTAAAATAGCGGCTGCGGGGCTCTCGTCGTGAAGAGAGCCTCTGCCTATTATTTTTTATGGCGGTACATAGGCGTGAGATAGGGAAGTGAGGTCAGGCGGATGTTGTAGATGAAGTCGATGACTCT > BS168_reference_genome/1173937‑1174213 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |