| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BS168_reference_genome | 1,222,981 | C→G | 5.5% | P150R (CCT→CGT) | oppC → | oligopeptide ABC transporter (permease) |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 1,222,981 | 0 | C | G | 5.5% | 274.2 / 6.4 | 78 | P150R (CCT→CGT) | oppC | oligopeptide ABC transporter (permease) |
| Reads supporting (aligned to +/- strand): ref base C (30/43); new base G (2/2); total (33/45) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.02e-01 | |||||||||||
TCAATCTTTATCGGTGTTGCAGCTGCTGTTCTCGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAGGCTGGATTAATATGGCCAGAATCGTGCGCGGACAAGTGCTGCAGCTGAAGAATCAGG > BS168_reference_genome/1222848‑1223118 | tcAATCTTTATCGGTGTTGCAGCTGCTGTTCTCGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCat > 8:24715/1‑139 (MQ=255) aaTCTTTATCGGTGTTGCAGCTGCTGTTCTCGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTc < 1:78323/135‑1 (MQ=255) aaTCTTTATCGGTGTTGCAGCTGCTGTTCTCGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTc < 8:271869/135‑1 (MQ=255) aTCTTTATCGGTGTTGCAGCTGCTGTTCTAGATTTGCTGATCGGCGTCATTTGGGGGAGAATTTCAGTCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCattat < 7:218131/139‑1 (MQ=255) tATCGGTGGTGCAGCTGCTGTGCTCGATTTGCTGATCGGCGTCATTTGGGGGAGCATCGCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAAt < 3:238339/138‑1 (MQ=255) aTCGGTGTTGCAGCTGCTGTTCTCGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATgg > 3:128888/1‑139 (MQ=255) tCGGTGTTGCAGCTGCTGTTCTCGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATgg < 3:25848/138‑1 (MQ=255) tgtTGCAGCTGCTGTTCTCGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAAt < 8:309992/132‑1 (MQ=255) tgtTGCAGCTGCTGTTCTCGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAAt > 7:309992/1‑132 (MQ=255) tgtTGCAGCTGCTGTTCTCGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATc > 5:118169/1‑139 (MQ=255) tgtTGCAGCTGCTGTTCTCGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCAGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATc > 6:241853/1‑139 (MQ=255) tgtTGCAGCTGCTGTTCTCGATTTGCTGATCGGCGTCATATGGGGGAGCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATc < 1:262086/139‑1 (MQ=255) tgtTGCAGCTGCTGTTCTCGATTTGCTGATCGGCGTCAATTGGGGGAGCATTTCACGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTAGCGCTGATATCCTTTCGGCAGTTCCTTCATTATAAATGGTTATc > 2:237688/1‑139 (MQ=255) ttGCAGCTGCTGTTCTCGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCTGGCTTCCGCGGATGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTc < 8:170279/121‑1 (MQ=255) ttGCAGCTGCTGTTCTCGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCTGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATGGCTGATATCCTTTGGGCAGTTCCTTc > 7:170279/1‑121 (MQ=255) cAGCTGCTGTTCTCGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCGTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACt < 7:152815/139‑1 (MQ=255) gctgTTCTCGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCTTTCATTATTAATGGTTATCTTAATGATgg > 7:134788/1‑139 (MQ=255) gctgTTCTCGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCattat > 4:49082/1‑118 (MQ=255) gctgTTCTCGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCattat < 3:49082/118‑1 (MQ=255) gctgTTCTCGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATgg > 6:152099/1‑139 (MQ=255) ctcGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCattat < 7:5024/112‑1 (MQ=255) ctcGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCattat > 8:5024/1‑112 (MQ=255) ctcGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGgttgtt < 5:228057/138‑1 (MQ=255) ctcGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGttc > 2:52202/1‑139 (MQ=255) gCTGATCGGCGTCATTTGGGGGCGCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAGTGGTTATCTTACTGATGGTTGTTCTTCCGa > 8:11157/1‑137 (MQ=255) gCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTTTCTTACTGATGGTTGTTCTTCCGa > 2:298034/1‑137 (MQ=255) gCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGaa < 8:111672/138‑1 (MQ=255) gCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGaa < 5:348861/138‑1 (MQ=255) gCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCATCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGa > 4:226723/1‑137 (MQ=255) aTCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGt < 5:231457/138‑1 (MQ=255) tCGGCGTCATTTGGGGGAGGATTTCAGGCTTACGCGGAGGAAGAAAAGATGAAATCATGATGCGTATCGCTGATATCCATTGGGCAGTTCCTTCATTATTAATGGTTATGTTTCTGATGGTTGTTATTCCGAAAGGTc > 6:205614/1‑138 (MQ=255) cGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGt > 3:231822/1‑102 (MQ=255) cGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGt < 4:231822/102‑1 (MQ=255) aTTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGa < 7:24715/139‑1 (MQ=255) tttGGGGGAGCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGat < 1:80537/139‑1 (MQ=255) gCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCGTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGc > 2:86120/1‑139 (MQ=255) gCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCGTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGc > 2:91558/1‑139 (MQ=255) cATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGcc < 3:267488/139‑1 (MQ=255) cATTTCAGGCGTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGcc < 1:237688/139‑1 (MQ=255) tttCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCAt < 1:52202/139‑1 (MQ=255) tttCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCATCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCAt < 3:226723/139‑1 (MQ=255) tCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTa > 4:178867/1‑138 (MQ=255) tCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTa > 6:303343/1‑138 (MQ=255) cgcgGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTTCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAg > 7:229234/1‑139 (MQ=255) cgcgGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAg > 7:109327/1‑139 (MQ=255) gcgGATGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGTGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAgg < 3:282055/139‑1 (MQ=255) gcgGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCGTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAgg < 1:86120/139‑1 (MQ=255) gcgGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCGTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAgg < 1:91558/139‑1 (MQ=255) gcgGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAgg < 4:128888/139‑1 (MQ=255) gcgGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAgg < 6:118169/139‑1 (MQ=255) cgGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAGGc < 4:243425/139‑1 (MQ=255) ggaggaAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTTCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAgg < 8:229234/137‑1 (MQ=255) aaCAGATGAAATCATGATGCGTATCGCTGATATCCTTTGTGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAGGCTGGATTAat < 1:308772/139‑1 (MQ=255) aaCAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAGGCTGGATTAat < 3:149218/139‑1 (MQ=255) aaCAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAGGCTGGATTAat < 6:60482/139‑1 (MQ=255) aaCAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAGGCTGGATTAat < 7:26176/139‑1 (MQ=255) aaCAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAGGCTGGATTAat < 3:178867/139‑1 (MQ=255) aCAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTTATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAGGCTTGATTAat < 5:241853/138‑1 (MQ=255) gAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAgg < 7:310862/122‑1 (MQ=255) gAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAgg > 8:310862/1‑122 (MQ=255) aaaTCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAATGTCTATTTTCGATTATTATTGCCATGACGATTACAGGCTGGATAAATATGGCCa < 5:205614/138‑1 (MQ=255) atgatgCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAGGCTGGa < 3:93571/121‑1 (MQ=255) atgatgCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAGGCTGGa > 4:93571/1‑121 (MQ=255) gatgCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTATAGGCTGGa > 5:220798/1‑119 (MQ=255) gatgCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTATAGGCTGGa < 6:220798/119‑1 (MQ=255) gatgCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAGGCTGGATTAATATGGCCAGAATCGTg > 6:90803/1‑139 (MQ=255) gatgCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAGGCTGGATTAATATGGCCAGAATCGTg > 3:277846/1‑139 (MQ=255) tgCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAGGCTGGATTAATATGGCCAGAATCGTgcg < 5:125380/139‑1 (MQ=255) cGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAGGCTGGATTAATATGGCCAGAATCGTGcgcg > 6:176097/1‑139 (MQ=255) atatCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATTGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAgg > 8:191653/1‑100 (MQ=255) atatCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATCGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAgg < 7:191653/100‑1 (MQ=255) tatCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGGTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAGGCTGGATTAATATGGCCAGAATCGTGCGCGGACAAGtgctg < 2:127940/139‑1 (MQ=255) ttgtcAGTTCCTTCATTATTAATGGTTAACATACTTATTTTTTTTATTCAAAAAAGTCTATTAACGATTATTAATGCAATTACTATTACAGGCTGGATTAATATTGCAAGAAAAGTGCTCGGACAATAGATTCAGCTg > 8:7895/5‑138 (MQ=255) tGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAGGCTGGATTAATATGGCCAGAATCGTGCGCGGACAAGTGCTGCAGCTg > 6:367101/1‑138 (MQ=255) gggCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAGGCTGGATTAATATGGCCAGAATCGTGCGCGGACAAGTGCTGCAGCTga < 7:7895/138‑1 (MQ=255) aGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAGGCTGGATTAATATGGCCAGAATCGTGCGCGGACAAGTGCTGCAGCTGAAGAAt < 1:14739/139‑1 (MQ=255) ttCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAGGCTGGATTAATATGGCCAGAATCGTGCGCGGACAAGtgctg > 5:127585/1‑125 (MQ=255) ttCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAGGCTGGATTAATATGGCCAGAATCGTGCGCGGACAAGtgctg < 6:127585/125‑1 (MQ=255) agccTTCATTATTAATGGTTATGTTACTGATGGTTTTTATGGCGAAAGCTCAATTTACGATTATTAATACCAAGACGATTACAGGCTGGATTAATATGGCCAGAATCGTGCGCGGACAAGTGCTGCAGAAGAAGAATCa > 3:134030/3‑139 (MQ=255) ccTTGATTTATAATGTTTTTGTTAATGATGGTTGGTGTTCCGATATGTGTATTTTCGATTATTATTGACATTAATATTACACGGGGGATTATTATGTCCAGAATCGTGCGCGGACAAGGGCTGCATCTGAAGAATCAg < 4:134030/138‑1 (MQ=255) cTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAGGCTGGATTAATATGGCCAGAATCGTGCGCGGACAAGTGCTGCAGCTGAAGAATCAgg < 5:367101/138‑1 (MQ=255) | TCAATCTTTATCGGTGTTGCAGCTGCTGTTCTCGATTTGCTGATCGGCGTCATTTGGGGGAGCATTTCAGGCTTCCGCGGAGGAAGAACAGATGAAATCATGATGCGTATCGCTGATATCCTTTGGGCAGTTCCTTCATTATTAATGGTTATCTTACTGATGGTTGTTCTTCCGAAAGGTCTATTTACGATTATTATTGCCATGACGATTACAGGCTGGATTAATATGGCCAGAATCGTGCGCGGACAAGTGCTGCAGCTGAAGAATCAGG > BS168_reference_genome/1222848‑1223118 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |