| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | BS168_reference_genome | 2,648,641 | A→G | 5.6% | F4S (TTT→TCT) | yqeF ← | putative lipoprotein; putative esterase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | BS168_reference_genome | 2,648,641 | 0 | A | G | 5.6% | 217.0 / 4.2 | 71 | F4S (TTT→TCT) | yqeF | putative lipoprotein; putative esterase |
| Reads supporting (aligned to +/- strand): ref base A (30/37); new base G (2/2); total (32/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.10e-01 | |||||||||||
ACCCACTGCTGTGCTTTTGGATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCACTGTTTTTTCCTATAGTTAACGTGTCCCCCTCAGTGAATATCATTC > BS168_reference_genome/2648503‑2648773 | aCCCACTGCTGTGCTTTTGGATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATaa < 7:79930/139‑1 (MQ=255) ctgctgTGCTTTTGGATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGt < 1:252858/139‑1 (MQ=255) gtgCTTTTGGATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCAt > 6:312890/1‑139 (MQ=255) ttGGATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATaa < 2:9600/123‑1 (MQ=255) ttGGATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATaa > 1:9600/1‑123 (MQ=255) tGGATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTac < 7:339551/138‑1 (MQ=255) tCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCa > 6:301909/1‑138 (MQ=255) tAATCCCATTTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCt < 2:102194/139‑1 (MQ=255) tAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCt < 5:301909/139‑1 (MQ=255) tAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCt < 2:294736/139‑1 (MQ=255) tAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCt < 2:1666/139‑1 (MQ=255) aTCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTc < 1:351684/138‑1 (MQ=255) ccAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACtt < 5:312890/139‑1 (MQ=255) ccAATTAGAGACACGCGTATTACTGTCACCAAATGCTACAACGGCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACtt < 2:113748/139‑1 (MQ=255) cAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACttt < 3:314029/139‑1 (MQ=255) cAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACttt < 3:156961/139‑1 (MQ=255) aatAGAGCCACGCGAATTACAGTCACCAAATGCTACAACGTCTTCGTATCCACTTCCCTCGCATCATGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGATTCATCTTTACACCCCCAAAAGCCTCACTGTaa > 3:59541/3‑139 (MQ=255) aTTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTaa < 8:46842/139‑1 (MQ=255) aTTAGAGCCAAGAGTATTACTTTCAACAAATTCTACAACGTCTTCGTATCCACTTCCCTAGCATCCTGCTGTAACTAACAGCATAAGGATAATTATTATAAAATTTTTCATCTTTACACCCCCAAAAGCCTCACTTTaa < 8:49043/139‑1 (MQ=255) agagCCACGAGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATg < 4:262360/138‑1 (MQ=255) gCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTtat < 8:143744/139‑1 (MQ=255) cACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATAc > 7:95201/1‑139 (MQ=255) aCGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATAc > 8:117590/1‑138 (MQ=255) cgcgTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATaaa > 1:60381/1‑92 (MQ=255) cgcgTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATaaa < 2:60381/92‑1 (MQ=255) cgcgTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCa < 8:256089/100‑1 (MQ=255) cgcgTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCa > 7:256089/1‑100 (MQ=255) cgcgTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCt > 4:71830/1‑121 (MQ=255) cgcgTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCt > 5:46996/1‑121 (MQ=255) cgcgTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCt < 3:71830/121‑1 (MQ=255) cgcgTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCt < 6:46996/121‑1 (MQ=255) cgcgTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACct < 8:95201/139‑1 (MQ=255) cgcgTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACct < 7:117590/139‑1 (MQ=255) tGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTctct > 1:277001/1‑139 (MQ=255) tCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTc > 4:340608/1‑139 (MQ=255) tCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTc > 3:350398/1‑139 (MQ=255) cACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCg > 8:312532/1‑139 (MQ=255) aCCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCt > 1:116562/1‑107 (MQ=255) aCCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCt < 2:116562/107‑1 (MQ=255) aCCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTaa < 4:263727/115‑1 (MQ=255) aCCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTaa > 3:263727/1‑115 (MQ=255) aCCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGt > 4:65600/1‑139 (MQ=255) aCCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGt > 8:101085/1‑139 (MQ=255) ccAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTaca < 1:161266/93‑1 (MQ=255) ccAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTaca > 2:161266/1‑93 (MQ=255) ccAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGtt < 2:277001/139‑1 (MQ=255) cTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGaa > 8:21750/1‑139 (MQ=255) cTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGaa < 7:312532/139‑1 (MQ=255) accGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAACAGCCTCACTTTAATCTTATACATCTGTTTCTCTGCGTTCAGTGAAGAGt > 8:274803/3‑139 (MQ=255) tCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGGTATACCTCTGTTTCTCTTCGTTCAATGAAGAGttttt > 4:245590/1‑139 (MQ=255) cGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAATTGATTATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCg < 4:59541/137‑1 (MQ=255) tCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCa < 1:69245/139‑1 (MQ=255) tCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCa < 3:65600/139‑1 (MQ=255) ccTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCa < 4:294114/136‑1 (MQ=255) ccTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCa > 3:294114/1‑136 (MQ=255) tCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCt > 5:77947/1‑77 (MQ=255) tCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCt < 6:77947/77‑1 (MQ=255) ccTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAGAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCACTGttttt > 6:73493/1‑139 (MQ=255) ccTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAGAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCACTGttttt > 6:68129/1‑139 (MQ=255) gCATCCTGCTGTATCGAACATCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCACTGTTTTTTcc < 7:274803/138‑1 (MQ=255) gCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAGAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCACTGTTTTTTcc < 5:68129/138‑1 (MQ=255) gCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAGAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCACTGTTTTTTcc < 5:73493/138‑1 (MQ=255) gCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCACTGTTTTTTcc < 3:324763/138‑1 (MQ=255) ctgTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTGTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGATATCACTGTTTTTTCCTATAGTTaa > 4:68982/1‑139 (MQ=255) tAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTATACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCACTGTTTTTTCCTATAGTTAAc < 1:287249/137‑1 (MQ=255) aaCGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCACTGTTTTTTCCTATAGTTAACgtg > 4:216838/1‑139 (MQ=255) aaCAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGATGAGTTTTTCGATATCACTGTTTTTTCCTATAGTTAACGTGTccc > 8:265884/1‑139 (MQ=255) aaCAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCACTGTTTTTTCCTATAGTTAACGTGTccc > 6:281595/1‑139 (MQ=255) agcagAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCACTGTTTTTTCCTATAGTTAACGTGTCCCCCt < 3:340608/139‑1 (MQ=255) agcagAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCACTGTTTTTTCCTATAGTTAACGTGTCCCCCt < 7:101085/139‑1 (MQ=255) cagAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGttt < 3:251011/96‑1 (MQ=255) cagAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGttt > 4:251011/1‑96 (MQ=255) cagAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCACTGTTTTTTCCTATAGTTAACGTGTCCCCCt > 1:187233/1‑137 (MQ=255) gAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCACTGTTTTTTCCTATAGTTAACGTGTCCCCCTCAGTGaa > 2:362757/1‑138 (MQ=255) aaaGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCACTGTTTTTTCATATAGTTAACGTGTCACCCTCAGTGAatat > 5:300848/1‑139 (MQ=255) atgatAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCACTGTTTTTTCCTATAGTTAACGTGTCCCCCTCAGTGAATATCATTc < 5:281595/139‑1 (MQ=255) | ACCCACTGCTGTGCTTTTGGATAATCGCGATAATCCCAATTAGAGCCACGCGTATTACTGTCACCAAATGCTACAACGTCTTCGTATCCCCTTCCCTCGCATCCTGCTGTAACGAACAGCAGAAGGAAAAGGATGATAAAATGTTTCATCTTTACACCCCCAAAAGCCTCACTTTAATGTTATACCTCTGTTTCTCTTCGTTCAATGAAGAGTTTTTCGCTATCACTGTTTTTTCCTATAGTTAACGTGTCCCCCTCAGTGAATATCATTC > BS168_reference_genome/2648503‑2648773 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |