BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	Exported	1,922	C→T	intergenic (–/‑1056)	– / → eryR	–//vntifkey=4

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	Exported	1,922	0	C	T	97.7%	12870.6 / 146.9	3685	intergenic (–/‑1056)	–/eryR	–//vntifkey=4
Reads supporting (aligned to +/- strand): ref base C (33/52); new base T (1444/2149); total (1482/2203)
Fisher's exact test for biased strand distribution p-value = 8.24e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 3685 total aligned reads displayed.

ACTCCCCGTTAGCTTAACAGGTCTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGCAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGATTTTGCCCGACATAGTCGGGGTGTTCAACGATATCTTTTATGTGCGATGAATATTTTTCATAAATACCAGGATGTTGTT  >  Exported/1786‑2059

 ctacccGTTAGCTTAACAGGTCTTTTTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAAt                                                                                                                                        <  8:216132/136‑1 (MQ=255)

 cTCCCCGTTAGCTTACCAGGTCTTTGTAAGCAATAAAACGTCCACTCTTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAAt                                                                                                                                        <  2:335798/139‑1 (MQ=255)

 cTCCCCGTTAGCTTAACATGTCTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAAt                                                                                                                                        <  7:215814/139‑1 (MQ=255)

 cTCCCCGTTAGCTTAACAGGTCTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTTGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAAt                                                                                                                                        <  8:391802/139‑1 (MQ=255)

 cTCCCCGTTAGCTTAACAGGTCTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAAt                                                                                                                                        <  4:240376/139‑1 (MQ=255)

 cTCCCCGTTAGCTTAACAGGTCTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAAt                                                                                                                                        <  4:461966/139‑1 (MQ=255)

 cTCCCCGTTAGCTTAACAGGTCTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAAt                                                                                                                                        <  3:290950/139‑1 (MQ=255)

 cTCCCCGTTAGCTTAACAGGTCTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAAt                                                                                                                                        <  3:257772/139‑1 (MQ=255)

 cTCCCCGTTAGCTTAACAGGTCTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAAt                                                                                                                                        <  5:42150/139‑1 (MQ=255)

 cTCCCCGTTAGCTTAACAGGTCTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAAt                                                                                                                                        <  2:74077/139‑1 (MQ=255)

 cTCCCCGTTAGCTTAACAGGTCTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAAt                                                                                                                                        <  2:252864/139‑1 (MQ=255)

 cTCCCCGTTAGCTTAACAGGTCTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAAt                                                                                                                                        <  7:424852/139‑1 (MQ=255)

 cTCCCCGTTAGCTTAACAGGTCTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAAt                                                                                                                                        <  7:5958/139‑1 (MQ=255)

 cTCCCCGTTAGCTTAACAGGTCTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAAt                                                                                                                                        <  8:178953/139‑1 (MQ=255)

 cTCCCCGTTAGCTTAACAGGTCTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAAt                                                                                                                                        <  8:315891/139‑1 (MQ=255)

 cTCCCCGTTAGCTTAACAGGTCTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAAt                                                                                                                                        <  1:454182/139‑1 (MQ=255)

 cTCCCCGTTAGCTTAACAGGTCTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGCAAt                                                                                                                                        <  8:69206/139‑1 (MQ=255)

    cccGTTAGCTTAACAGGTCTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTAGAGTAATTAg                                                                                                                                     >  6:59429/1‑139 (MQ=255)

      cGTTAGCTTAACAGGTCTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGCAAt                                                                                                                                        <  2:174435/134‑1 (MQ=255)

        ttAGCTTAACAGGTCTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGtata                                                                                                                                 <  5:207993/139‑1 (MQ=255)

            cTTAACAGGTCTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAACTAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGt                                                                                                                             >  4:397556/1‑139 (MQ=255)

            cTTAACAGGTCTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGt                                                                                                                             <  1:396598/139‑1 (MQ=255)

              tAACAGGTCTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCa                                                                                                                           >  6:450664/1‑139 (MQ=255)

               aaCAGGTCTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCAt                                                                                                                          >  7:14660/1‑139 (MQ=255)

                aCAGGTCTTTGTAAGCAATTAAACGTCCACTATTCAAACGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATACCCGCTTGGGACCAACGTTATAGTAATTAGTATATGGTCAtt                                                                                                                         >  4:319403/1‑139 (MQ=255)

                  aGGTCTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTa                                                                                                                       <  1:368513/139‑1 (MQ=255)

                  aGGTCTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTa                                                                                                                       <  1:197079/139‑1 (MQ=255)

                    gTCTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTaa                                                                                                                      >  7:111228/1‑138 (MQ=255)

                      cTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAAt                                                                                                                                        <  7:276594/118‑1 (MQ=255)

                      cTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTa                                                                                                                       <  6:268179/135‑1 (MQ=255)

                      cTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACAGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTa                                                                                                                       <  8:452476/135‑1 (MQ=255)

                       tttGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAAt                                                                                                                                        >  3:456546/1‑117 (MQ=255)

                       tttGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATc                                                                                                                  >  1:225681/1‑139 (MQ=255)

                       tttGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATc                                                                                                                  >  1:285420/1‑139 (MQ=255)

                       tttGTAAGCAATTAAACGTCCACTATTCAACCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATc                                                                                                                  >  1:83838/1‑139 (MQ=255)

                        ttGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATc                                                                                                                  <  4:78191/138‑1 (MQ=255)

                         tGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAAt                                                                                                                                        >  5:171633/1‑115 (MQ=255)

                         tGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAAt                                                                                                                                        <  2:438159/115‑1 (MQ=255)

                              gCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATc                                                                                                                  >  5:144175/1‑132 (MQ=255)

                                 aTTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAAtt                                                                                                        <  5:115031/139‑1 (MQ=255)

                                     taCGTCCTCTATTCAATCGTCTTTGGATTTTCTCTGGTCCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCATCTTTATAGTAATTAGTATATGGTCATTTCAAATCTTTACCAATTCaa                                                                                                     <  2:107972/137‑1 (MQ=255)

                                     aaCGTCCCCTCTTCACTCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCaa                                                                                                     <  4:18025/138‑1 (MQ=255)

                                     aaCGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCaa                                                                                                     <  1:130454/138‑1 (MQ=255)

                                     aaCGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCaa                                                                                                     <  7:246990/138‑1 (MQ=255)

                                     aaCGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCaa                                                                                                     <  6:168132/138‑1 (MQ=255)

                                     aaCGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCaa                                                                                                     <  3:225472/138‑1 (MQ=255)

                                     aaCGGCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCaa                                                                                                     <  6:138671/138‑1 (MQ=255)

                                      aCGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACg                                                                                                   <  6:417357/139‑1 (MQ=255)

                                         tCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCaa                                                                                                     >  6:383043/1‑134 (MQ=255)

                                         tCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTa                                                                                                <  3:71218/139‑1 (MQ=255)

                                          ccACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAAt                                                                                                                                        <  4:207157/98‑1 (MQ=255)

                                          ccACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATc                                                                                                                  <  8:425209/120‑1 (MQ=255)

                                          ccACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTAt                                                                                               >  1:100366/1‑139 (MQ=255)

                                          ccACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTAt                                                                                               >  2:369083/1‑139 (MQ=255)

                                            aCTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTAGAGTAATTAGTATATGGTCATTTAAATTCTTTACCAATTCAACGCTAt                                                                                               >  2:50563/1‑137 (MQ=255)

                                              tATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAgg                                                                                           <  7:446603/139‑1 (MQ=255)

                                              gaTTCAATCGTCTTTTGATTTTAGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAAAAAATAACCGCTTGGGTCCAACTTTATAGCAATTAGTATATGGTCATTTAAAATCTTTAACAATTCAACGCTATTAgg                                                                                           <  6:348389/138‑1 (MQ=255)

                                                ttCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAgg                                                                                           <  8:150444/137‑1 (MQ=255)

                                                   aaTCGTCTTTGGATTTTCGCAGGACCGTTATTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGAATATGGTAATTTAAAATCTTTACCAATTCAAACCTATTAGTTTCtt                                                                                      >  4:145371/1‑139 (MQ=255)

                                                     tCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAAt                                                                                                                                        >  2:99687/1‑87 (MQ=255)

                                                     tCGTCTTTGGATTTTCGAATGACCGTTATTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTAAAGCAATTAGTATATGGTCATATAAAATCATTACAAATTCAACGCTAATATGtcatact                                                                                    >  4:112344/1‑133 (MQ=255)

                                                        tCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGa                                                                                 >  7:186272/1‑139 (MQ=255)

                                                        tCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGa                                                                                 >  6:312570/1‑139 (MQ=255)

                                                          tttGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGAtt                                                                               >  1:429128/1‑139 (MQ=255)

                                                          tttGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGAtt                                                                               >  3:129342/1‑139 (MQ=255)

                                                            tGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGAtt                                                                               <  3:387492/137‑1 (MQ=255)

                                                               aTTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGATTTTGcc                                                                          <  6:230664/139‑1 (MQ=255)

                                                                   tCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAAt                                                                                                                                        <  5:458003/73‑1 (MQ=255)

                                                                   tCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGATTTTGCCCGa                                                                       <  7:84308/138‑1 (MQ=255)

                                                                   tCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGATTTTGCCCGa                                                                       <  7:31599/138‑1 (MQ=255)

                                                                     gCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGATTTTGCCCGACa                                                                     <  1:163354/138‑1 (MQ=255)

                                                                       aGGACCGTTTTTTAGATCGAACTTACTTGATAAGAACAAATTACCGCTTGGGTCCAACTTTATAGTAATTTGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGATTTTGCCCGACATAg                                                                  <  2:290506/139‑1 (MQ=255)

                                                                          aCCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGATTTTGCCCGACATAGTCg                                                               <  8:11233/139‑1 (MQ=255)

                                                                          aCCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCATGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAAGCTTTACCAATTCAACGCTATTAGGTTCTTTAGGATTTTGCCCGACATAGTCg                                                               <  3:321739/139‑1 (MQ=255)

                                                                            cGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGATTTTGCCCGACATAGTCggg                                                             <  5:387602/139‑1 (MQ=255)

                                                                              ttttttAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATAAGAATATGGTCATTTAAAATCTTTACCAATTCAACGCGAATAGGTTCTTTAGGATTTTGCCCGACATAGTCGGGgt                                                           >  3:160854/1‑139 (MQ=255)

                                                                                  ttAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGATTTTGCCCGACATAGTCGGGGTGtt                                                        <  6:84452/138‑1 (MQ=255)

                                                                                  ttAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGATTTTGCCCGACATAGTCGGGGTGtt                                                        <  3:352032/138‑1 (MQ=255)

                                                                                   tAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAgg                                                                                           >  2:207315/1‑102 (MQ=255)

                                                                                    aGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGATTTTGCCCGACATAGTCGGGGTGTTCa                                                      <  5:66697/138‑1 (MQ=255)

                                                                                     gATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGATTTTGCCCGACATAGTCGGGGTGTTCAAc                                                    <  8:278580/139‑1 (MQ=255)

                                                                                       tCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGATTTTGCCCGACATAGTCGGGGTGTTCAACGa                                                  <  3:421531/139‑1 (MQ=255)

                                                                                         gAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGATTTTGCCCGACATAGTCGGGGTGTTCAACGata                                                <  6:112696/139‑1 (MQ=255)

                                                                                               aGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGTATTTTGCCCGCCATAGTCGGGGTTTACAACGatataatt                                           >  4:353290/1‑134 (MQ=255)

                                                                                                   gATAAGTACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGTTTTTGCCCGACATAGTCGGGGTGTTCAACGATATCTTTTAtg                                       <  1:6037/138‑1 (MQ=255)

                                                                                                   gATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGATTTTGCCCGACATAGTCGGGGTGTTCAACGATATCTTTTAtg                                       <  7:383786/138‑1 (MQ=255)

                                                                                                   gATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGGCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGATTTTGCCCGACATAGTCGGGGTGTTCAACGATATCTTTTAtg                                       <  7:345298/138‑1 (MQ=255)

                                                                                                    aTAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGATTTTGCCCGACATAGTCGGGGTGTTCAACGATATCTTTTAtgtg                                     >  5:317545/1‑139 (MQ=255)

                                                                                                    aTAAGAACAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGATTTTGCCCGACATAGTCGGGGTGTTCAACGATATCTTTTAtgtg                                     >  5:240187/1‑139 (MQ=255)

                                                                                                    aTAAGAACAAATAACCGCTTGGGTCAAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAgg                                                                                           >  5:274970/1‑85 (MQ=255)

                                                                                                           cAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAgg                                                                                           <  1:333184/78‑1 (MQ=255)

                                                                                                           cAAATAACCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGATTTTGCCCGACATAGTCGGGGTGTTCAACGATATCTTTTATGTGCGATGaa                              >  8:347247/1‑139 (MQ=255)

                                                                                                                 aCCGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGATTTTGCCCGACATAGTCGGGGTGTTCAACGATATCTTTTATGTGCGATGAATAtttt                        <  3:193284/139‑1 (MQ=255)

                                                                                                                   cGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCACCGCTATTAGGTTCTTTAGGATTTTGCCCGACATAGTCGGGGTGTTCAACGATATCTTTTATGTGCGATGAATAttttt                       >  6:197640/1‑138 (MQ=255)

                                                                                                                   cGCTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGATTTTGCCCGACATAGTCGGGGTGTTCAACGATATCTTTTATGTGCGATGAATAttttt                       >  2:135966/1‑138 (MQ=255)

                                                                                                                     cTTGGGTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAAAGCTATTAGGTTCTTTAGGATTTTGCCCGACATAGTCGGGGTGTTCAACGATATCTTTTATGTGCGATGAATATTTTTCa                     >  2:401940/1‑138 (MQ=255)

                                                                                                                        gggTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGATTTTGCCCGACATAGTCGGGGTGTTCAACGATATCTTTTATGTGCGATGAATATTTTTCATaaa                 >  4:434981/1‑139 (MQ=255)

                                                                                                                        gggTCCAACTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGATTTTGCCCGACATAGTCGGGGTGTTCAACGATATCTTTTATGTGCGATGAATATTTTTCATaa                  <  8:244884/138‑1 (MQ=255)

                                                                                                                           tCCAACTTTATAGCAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGATTTTGCCCGa                                                                       <  4:274730/82‑1 (MQ=255)

                                                                                                                              aaCTTTATAGTAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGATTTTGCCCGACATAGTCGGGGTGTTCAACGATATCTTTTATGTGCGATGAATATTTTTCATAAATACCAg           <  5:352869/139‑1 (MQ=255)

ACTCCCCGTTAGCTTAACAGGTCTTTGTAAGCAATTAAACGTCCACTATTCAATCGTCTTTGGATTTTCGCAGGACCGTTTTTTAGATCGAACATAGTTGATAAGAACAAATAACCGCTTGGGTCCAACTTTATAGCAATTAGTATATGGTCATTTAAAATCTTTACCAATTCAACGCTATTAGGTTCTTTAGGATTTTGCCCGACATAGTCGGGGTGTTCAACGATATCTTTTATGTGCGATGAATATTTTTCATAAATACCAGGATGTTGTT  >  Exported/1786‑2059

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`