| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 3,724,053 | C→T | 100% | E258E (GAG→GAA) | U712_19200 ← | SacPA operon antiterminator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 3,724,053 | 0 | C | T | 100.0% | 415.6 / ‑6.6 | 130 | E258E (GAG→GAA) | U712_19200 | SacPA operon antiterminator |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (80/49); minor base A (0/1); total (80/50) | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 130 total aligned reads displayed.
GGGCTGGATGTATTACACGCTCAATCCCGATAAATAAAAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGACTCCGGCAAATGTAATTGATATTCA‑CTTTTCAAAAACTCTGCCAGCTCAAGCGCACATTGATAGGCAAATGAATACTTTTTTTGGATGAAATAAAGCATCTCCTCGTCCATACGATGGAGCGCTTCATTTGAT > CP006881/3723921‑3724185 | gggCTGTATGTACTACACAATGAATCCTCATAAATAAAAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTcc < 3:61248/136‑1 (MQ=255)gggCTGGATGTACTACACACTGAATCCTGATCAATAAAAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGc > 8:28332/1‑139 (MQ=255) ggCTGGATGTACTACACACTGAATCCTGATCAATAAAAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCg > 3:361378/1‑136 (MQ=255) cTGGATGTACTACACACTGAATCCTGATCAATAAAAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCaaa > 1:25415/1‑139 (MQ=255) ggATGTACTACACACTGAATCCTGATCAATAAAAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCa > 3:38330/1‑135 (MQ=255) gATGTACTACACACTGAATCCTGATCAATAAAAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCaaa > 4:381243/1‑136 (MQ=255) gATGTACTACACACTGAATCCTGATCAATAAAAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCaaa > 4:179095/1‑136 (MQ=255) tactACACACTGAATCCTGATCAATAAAAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAAt < 2:25415/135‑1 (MQ=255) actACACACTGAATCCTGATCAATAAAAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTg > 6:55284/3‑139 (MQ=255) acacacTGAATCCTGATCAATAAAAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAAtt > 3:385526/1‑135 (MQ=255) acactgaaTCCTGATCAATAAAAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGc > 6:58906/7‑123 (MQ=255) acactgaaTCCTGATCAATAAAAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGc < 6:255877/117‑1 (MQ=255) acactgaaTCCTGATCAATAAAAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGc < 5:58906/117‑1 (MQ=255) ctgaaTCCTGATCAATAAAAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCat > 7:305688/4‑138 (MQ=255) tgaaTCCTGATCAATAAAAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGCTATTCatt > 2:205014/3‑137 (MQ=255) tgaaTCCTGATCAATAAAAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCatt > 1:203181/3‑137 (MQ=255) tgaaTCCTGATCAATAAAAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCatt > 1:303218/3‑137 (MQ=255) tgaaTCCTGATCAATAAAAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCatt > 7:292924/3‑137 (MQ=255) tgaaTCCTGATCAATAAAAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCatt > 5:270431/3‑137 (MQ=255) tgaaTCCTGATCAATAAAAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCatt > 8:195468/3‑137 (MQ=255) tgaaTCCTGATCAATAAAAAAACTTCAAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCatt > 8:120812/3‑137 (MQ=255) aaTCCTGATCAATAAAAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑tttt > 2:375808/1‑139 (MQ=255) aaTCCTGATCAATAAAAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑tttt > 1:42554/1‑139 (MQ=255) aaTCCTGATCAATAAAAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑tttt > 6:208502/1‑139 (MQ=255) aaTCCTGATCAATAAAAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑tttt > 1:360986/1‑139 (MQ=255) aTCCTGATCAATAAAAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCatt > 3:205842/1‑134 (MQ=255) gATCAATAAAAAAACTTCCAGAGATCACTCCCTGAAAGTCAAAGCGGTTATTCCGAGAGAACTTGAAGAAGCTGGACATGCAGCGTGATATAGCCGGCCTCGGCTTCCGCCAAATGTAAATGAAATTCA‑TATTTCaaa > 1:50570/1‑138 (MQ=255) atcaataaaAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCaaaaa < 7:195468/136‑1 (MQ=255) aataaaAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTATTTGATATTCA‑TTTTTCataaa > 4:44696/1‑136 (MQ=255) aataaaAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCaaaac > 4:38943/1‑135 (MQ=255) taaaAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAActccg > 7:182693/1‑137 (MQ=255) aaaaCTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAg < 5:208502/139‑1 (MQ=255) tCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGcc > 6:88661/1‑131 (MQ=255) tCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGcc < 5:88661/131‑1 (MQ=255) gagaTCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAgc < 3:145646/136‑1 (MQ=255) gagaTCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGca < 7:49841/139‑1 (MQ=255) cccTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAg > 2:66997/1‑139 (MQ=255) ccTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAACCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAgg < 5:329445/139‑1 (MQ=255) gCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAg < 7:208098/122‑1 (MQ=255) gCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAg > 8:208098/1‑122 (MQ=255) aaGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGc > 4:94888/1‑135 (MQ=255) cAATGCGGTTATTGCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGACTCGGATTCCGGCAAATGTATTTGATATTAA‑TTTTTCAAAATCTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGaa < 1:112234/138‑1 (MQ=255) aaaGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGAGCACATAGATATGAGAATGAATa > 5:193949/1‑139 (MQ=255) aGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGc < 7:383202/104‑1 (MQ=255) aGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGaa > 2:342168/1‑135 (MQ=255) gCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATa > 4:101117/1‑136 (MQ=255) ttATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACtttttt > 1:320584/1‑139 (MQ=255) ttATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACtttttt > 5:380977/1‑139 (MQ=255) aTTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTg > 8:110489/1‑139 (MQ=255) ccGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACttttttt < 4:361378/135‑1 (MQ=255) ccGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACttttttt < 4:2177/135‑1 (MQ=255) ccGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGa < 6:380977/138‑1 (MQ=255) ccGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGa < 7:71027/138‑1 (MQ=255) gagagaTCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGa < 1:159467/139‑1 (MQ=255) agagaTCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATAGTCA‑TTTTTCAACAACTCCGCCAGCTCCAGCGCACATTGATAGGCGCATGAATCCTGTTTTTGGATGa > 6:353284/1‑138 (MQ=255) cTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAg > 5:140230/1‑139 (MQ=255) ttGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATa > 4:23527/1‑135 (MQ=255) ttGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATa > 4:44461/1‑135 (MQ=255) gAAGACGCTGGTCATGGAGAGTGATATAGCCGGCCTGGGTTTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGTATGAATACTTTTTTTGGATGAAATAAAGc < 1:406795/137‑1 (MQ=255) gAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATaa < 3:179095/134‑1 (MQ=255) gAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATaa < 3:381243/134‑1 (MQ=255) gAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGc < 5:153825/137‑1 (MQ=255) gAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGc < 1:357750/137‑1 (MQ=255) aGACGCGGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGCAtct < 7:328652/139‑1 (MQ=255) gACGCTGGACATGCAGCGTGATATAGCCGGACTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGCAtctc < 7:120812/139‑1 (MQ=255) aCGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGCATctcc < 2:360986/139‑1 (MQ=255) aCGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCAGACAGCTCCAGCTCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGCATctcc < 8:305688/139‑1 (MQ=255) cGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCATTTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGCATctcc < 2:178747/139‑1 (MQ=255) cGCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGCATctcct < 6:363615/139‑1 (MQ=255) gCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATa < 2:185670/127‑1 (MQ=255) gCTGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATa > 1:185670/1‑127 (MQ=255) tGGACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGCATctcctc < 5:284113/137‑1 (MQ=255) ggACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACttttttt < 4:366176/114‑1 (MQ=255) ggACATGCAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGCATctcctc > 4:295248/1‑136 (MQ=255) gccATGCAGCGTGATATAGCCGGCCTCGGCTTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGCATCTCCTCGTc > 1:392042/3‑138 (MQ=255) cAGCGTGATCTTGCCGGCCTCGGAATCCGGCAAATGTAATTTATATTCT‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGCATCTCCTCGTCCATACg < 1:375808/138‑1 (MQ=255) cAGCGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGCATCTCCTCGTCCATACGa > 2:225884/1‑139 (MQ=255) cGTGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGCATCTCCTCGTCCATACGATg > 6:148102/1‑138 (MQ=255) tGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGCATCTCCTCGTCCATACGATGGAg < 6:162832/139‑1 (MQ=255) tGATATAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGCATCTCCTCGTCCATACGATGGAg < 5:198285/139‑1 (MQ=255) atatAGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGCATCTCCTCGTCCATACGATGGAgcg > 7:226362/1‑139 (MQ=255) taGCCGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGCATCTCCTCGTCCATACGATGGAGCGCt < 1:167009/138‑1 (MQ=255) ccGGCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGCAtctc < 8:345125/113‑1 (MQ=255) ggCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGCATCTCCTCGTCCATACGATGGAGCGCTTCAttt > 7:241879/1‑139 (MQ=255) gCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGc < 7:34738/50‑1 (MQ=255) gCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGc > 8:34738/1‑50 (MQ=255) gCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACttttttt > 3:337098/1‑91 (MQ=255) gCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGCATCTCCTCGTCCATACGATGGAGCGCTTCAttt > 7:356273/1‑138 (MQ=255) gCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGCATCTCCTCGTCCATACGATGGAGCGCTTCAttt > 5:54274/1‑138 (MQ=255) gCCTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGACAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGCATCTCCTCGTCCATACGATGGAGCGATTCATTTg > 6:284767/1‑139 (MQ=255) ccTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGaaa < 1:278672/98‑1 (MQ=255) ccTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGaaa > 2:278672/1‑98 (MQ=255) ccTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGCAtc > 6:424243/1‑107 (MQ=255) ccTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGCAtc < 5:424243/107‑1 (MQ=255) ccTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGCATCTCCTCGTCCATACGATGGAGCGCTTCATTTGa > 1:137473/1‑139 (MQ=255) cTCGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGCATCTCCTCGTCCATACGATGGAGCGCTTCATTTGAt > 6:218145/1‑139 (MQ=255) cGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGCATCTCCTCGTCCATACGATGGAGCGCTTCATTTGa > 3:287746/1‑136 (MQ=255) cGGATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGCATCTCCTCGTCCATACGATGGAGCGCTTCATTTGa > 3:181340/1‑136 (MQ=255) ggATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGCAt > 4:85150/1‑102 (MQ=255) ggATTCCGGCAAATGTAATTGATATTCA‑TTTTTCAAAAACTCCGCCAGCTCCAGCGCACATTGATAGGCGAATGAATACTTTTTTTGGATGAAATAAAGCAt < 3:85150/102‑1 (MQ=255) | GGGCTGGATGTATTACACGCTCAATCCCGATAAATAAAAAAACTTCCAGAGATCACTCCCTGCAAGTCAAAGCGGTTATTCCGAGAGATCTTGAAGACGCTGGACATGCAGCGTGATATAGCCGGCCTCGGACTCCGGCAAATGTAATTGATATTCA‑CTTTTCAAAAACTCTGCCAGCTCAAGCGCACATTGATAGGCAAATGAATACTTTTTTTGGATGAAATAAAGCATCTCCTCGTCCATACGATGGAGCGCTTCATTTGAT > CP006881/3723921‑3724185 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |