| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 929,530 | A→C | 10.0% | S58S (TCT→TCG) | U712_04525 ← | putative lipoprotein ygaO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 929,530 | 0 | A | C | 10.0% | 146.3 / 3.2 | 82 | S58S (TCT→TCG) | U712_04525 | putative lipoprotein ygaO |
| Reads supporting (aligned to +/- strand): ref base A (25/48); new base C (5/4); total (30/52) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GACAGCGATATATGACGCGCGACATGCTTTTGCCGTCATCATCTGCTCTCTTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATACCATCCCGCCGCTCTTTGTGCCGAAAAAAGATGCTATGCCTTCTGAGGCTTCAAAGTATGAAATCAGCGCCCAGCATGCAAGGCCAAA > CP006881/929395‑929664 | gACAGCGATATATGACGCGCGACATGCTTTTGCCGTCATCATCTGCTCTCTTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑Ga < 5:147668/138‑1 (MQ=255) aCAGCGATATATGACGCGCGACATGCTTTTGCCGTCATCATCTGCTCTCTTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GAcg < 5:274807/139‑1 (MQ=255) cGATATATGACGCGCGACATGCTTTTGCCGTCATCATCTGCTCTCTTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GAcgccgc > 7:33142/1‑139 (MQ=255) cGATATATGACGCGCGACATGCTTTTGCCGTCATCATCTGCTCTCTTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCGTTTTTTATTTAAGTACAAATAAAACCCA‑CAcgccgc > 8:382908/1‑139 (MQ=255) gagatatGACGCGCGACATGCTTTTGCCGTCATCATCTGCGCGCTTTCATCCTGCTCTTCAACCACAGCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GAcgcc < 4:71279/133‑1 (MQ=255) gATATTTGAGGCGCGACATGGTTTTGCCGTCATCATCTGCTCTCTTTCTTGCTGCTCTTCAAACTGATCAGGCAGATGTTGGTGCTTTCTGGCTGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GACGCCGca < 8:204646/139‑1 (MQ=255) gATATATGACGCGCGACATTCTTTTGCCGTCATCATCTGCTCTCTTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGAACAAATAAACCGCA‑GACGCCGca < 7:96938/139‑1 (MQ=255) gATATATGACGCGCGACATGCTTTTGCCGTCATCATCTGCTCTCTTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GACGCCGca < 8:306812/139‑1 (MQ=255) tatatGACGCGCGACATGCTTTTGCCGTCATCATCTGCTCTCTTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GACGCCGcaac < 2:133659/139‑1 (MQ=255) tatatGACGCGCGACATGCTTTTGCCGTCATCATCTGCTCTCTTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTATTTAATTACAAATAAACCGCA‑GAcgcccc > 4:135599/1‑134 (MQ=255) tatatGACGCGCGACATGCTTTTGCCGTCATCATCTGCTCTCTTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTATGTAAGTACAAATAAACCGCA‑GACGCCGcaa > 8:45676/1‑138 (MQ=255) tGACGCGCGACTTGCTTTTGGCGTCATCATCTGCTCTCTTTCATCATGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GACGCCGCaacaaac < 7:382908/139‑1 (MQ=255) tGACGCGCGACATGCTTTTGCCGTCATCATCTGCTCTCTTTCATCCTGCTCTTCAAACTCATCAGGCCGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GACGCCGCaacaaac < 8:248843/139‑1 (MQ=255) tGACGCGCGACATGCTTTTGCCGTCATCATCTGCTCTCTTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GACGCCGCaacaaac < 6:98577/139‑1 (MQ=255) tGACGCGCGACATGCTTTTGCCGTCATCATCTGCTCTCTTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GACGCCGCaacaaac < 1:284427/139‑1 (MQ=255) tGACGCGCGACATGCTTTTGCCGTCATCATCTGCTCTATTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GACGCCGCaacaaac < 1:399555/139‑1 (MQ=255) tGACGCGCGACATGCTTTTGCCGTCATCATCTGATCTCTTTCATCCTGCTCTTCAAACTAATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTAAAAATAAACCGCA‑GACGCCGCaacaaac < 1:166913/139‑1 (MQ=255) tGACGCGCGACATGATTTTGCCGTCATCATCTGCTCTCTTTCATCCTGCTGTTCAAACTCTTCAGGCAGATGTAGGTGCTTTCTGGCTGGGCGGCTTTTTTTGTGTAAGTACAAATAAACCGCA‑GACGCCGcaaca < 3:76236/136‑1 (MQ=255) ggACGCGCGACATGCTTTTGCCGTCATCATCTGCTCTCTTTCCTCCTGCGCTTCAAACTCATCAGGCAGAAGTCGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GACGCCGCaacaaac < 2:250319/138‑1 (MQ=255) gccgcgcgACATGCTTTTGCTGTCATCATCTGCTCTCTTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GACGCCGCaacaaac < 8:326/136‑1 (MQ=255) gccgcgcgACATGCTTTTGCCGTCTTCATGTGCTGTCTTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCTGGGCGGCTTTTTTTCTGTAATTACAAATAACCCGCA‑GACGCCGcaaca < 3:125873/133‑1 (MQ=255) cgcgcgACATGCTTTTGCCGTCATCATCTGCTCTCTTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGGAAGTACAAAAAAACCGCA‑GACGCCCCaacaaacac > 1:151367/1‑137 (MQ=255) cgcgcgACATGCTTTTGCCGTCATCATCTGCTCTCTTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTGTGTTTGTGTTATTTCAAATAAACCCCC‑GACCCCGCcacaaaacg > 1:420912/1‑135 (MQ=255) cgcgcgACATGCTTTTGCCGTCATCATCTGCTCTCTTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCGTTTTTTGTGGAAGTACAAATAAACCGCA‑GACGCCGCCACAAACAg > 7:77585/1‑138 (MQ=255) cgcgcgACATGCTTTTGCCGTCATCATCTGCTCTCTTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCGTTTTTTCTGTTAGTACAAATAAACCGCC‑GCCGCCGCAACCAACAg > 7:52515/1‑138 (MQ=255) gcgACATGCTTTTGCCGTCATCATCTGCTCTCTTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCGTTTTTTATGTAAATACAAATTAAACCCA‑GACGCCGCaacaaacaa > 4:125873/1‑134 (MQ=255) gcgACATGCTTTTGCCGTCATCATCTGCTCTCTTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCGTTCTGGCAGGGCGGC‑TGTTTTCTTTAAGGAAAAATAAACCCCA‑GACGCCGCAACAAACAGAATa > 8:286533/1‑138 (MQ=255) gACTTGCTTTTGCCGTATTATTCTGCTCTCTTTCATCTTGGTTTTAAAAATGATCTGGCTGATGTTGCTGCTTTTTGGCAGGGGGGTTTTTTTTATGAATGTACAAATAAACCGCA‑GACGCCGCAACAAACAGAATaaa < 2:317120/139‑1 (MQ=255) gACATGCTTTTGCCGTAATCTTCTGCTCTCTTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGGTTTCTGGCAGGGGGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GACGCCGCAACAAACAGAATaaa < 8:97694/139‑1 (MQ=255) cATGCTTTTGCCGTCATCATCTGCTCTCTTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTGTTTTTTTTTTATTAAAAAAAAAACCCC‑GGCGCCGCACCCAACAGAATa > 3:254378/1‑135 (MQ=255) ggTCATCATCTGCTGTCTTTCATCCTGCTCTTCAAAATCTTCTGGCAGAAGTAGCTGCTTTCTGGCTGGGCGGCTTTTTTTGTGTAAGTAAAAATAAACCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGttt < 8:147363/138‑1 (MQ=255) cttcatcaTCTGCTCTCTTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAgg < 3:135599/134‑1 (MQ=255) cGTCATCATCTGCTCTCTTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGttt < 7:56344/139‑1 (MQ=255) atcatcTGCTCTCTTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTaaa < 8:33142/138‑1 (MQ=255) tcatcTGCTCTCTTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATc < 8:356232/139‑1 (MQ=255) tcatcTGCTCTCTTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATc < 6:360790/139‑1 (MQ=255) tcatcTCCGCGCTTGCATCAGGCTCTTCACAAGCATCCGGCTCAAGTCGCTGCTTTCTGGCCGGGGGGCTTTTTTTCTGTAAGTAAAAATAACCCGCC‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATc < 2:420912/139‑1 (MQ=255) catcTGCTCTCTTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCGTTTTTTGTGTAATTACAAATAAACCCCA‑GCCGCCGCAACCAACAGAATAAAGGGAGTGAGGTTTaaa > 3:306690/1‑136 (MQ=255) ctctctTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCaaa < 7:172958/135‑1 (MQ=255) ctctctTTCAACCTGCTCTTCAAACACATCAGGCAGCAGTAGCTGCTTTCTGGCAGGGCGCCGTTTTTTCTCTAAGTACAAATAAACCGCA‑CAACCCCCCACAAACAGAATAAATGCAGTGCTGTTTAAATCAAAAAcc > 7:147363/1‑139 (MQ=255) tctTTCATCCTGCTCTTCAACCTCATCAGGCAGAAGTAGCTGCTTTCGGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAACCCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATa < 4:288745/134‑1 (MQ=255) tctTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAACCCCCC‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATACCa < 5:427725/137‑1 (MQ=255) tttCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATACCAt < 1:26228/136‑1 (MQ=255) tttCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCGGTTTTTATGTTATTAAAAAAAAACCCCC‑AACCCCGCAACAAACAAAATAAAAGGACTGTGGTTTAAAACAAAAACCAAccc > 2:220581/1‑139 (MQ=255) ttCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTGTTTTAATAAAAAAAAACCGCA‑GACCCCCCAACCAAAAGAATAAAAGGTCTGAGGTTTAAAAAAAATAACaaaccg > 8:172958/1‑134 (MQ=255) ctctTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATACCATCCCGCCGCTCttt > 7:323814/1‑139 (MQ=255) ctctTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTATGTTAGTACAAATAAACCGCA‑GCCGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATACCATACCGCCGCTCttt > 5:303089/1‑139 (MQ=255) ctctTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCGTTTTTTTTGTAAGTTAAAATAAACCGCA‑GACGCCGCCAAAAACAGAAAAAAGGGAGTGTGGTTTAAAAAAAATACCAACCcgccgccgctt > 5:415560/1‑134 (MQ=255) tctTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTTTGTTAGTTCAAAAAAAACCCA‑GACGCCGCAACAAAAACAATAAATGGAGTGATGTTTAAATAAAATACCATAacgccccggt > 3:39570/1‑131 (MQ=255) tctTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTATTTAATTTAAAATAAACCGCA‑GACGCCGCAACAAAAAGAAAAAAAGGAGTGAGGTTTAAATAAAATAACAAACccccgcggt > 3:149035/1‑133 (MQ=255) ttCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCGTTTTTTATGTTAGTTCAAATAAACCCCA‑CACCCCGCAACAAACACAATAAATGGAGTGAGGTTTAAATAAAATACCATCCcgccgcgggtt > 3:42169/1‑131 (MQ=255) aCTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTTAGTACCAATAAACCGCA‑GACGCCGCCACAAACAGAATAAAGGGTGTGAGGTTTAAATCAAATACCATCCCGCCGCGGGTTGTGCCGa > 6:162069/1‑138 (MQ=255) aCTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATACCATCCCGCCGCTCTTTGTGCCGaa < 1:73944/139‑1 (MQ=255) tcaGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTATGTTAGTTAAAATAAAACCCC‑GCCGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAAAAAAATACCAACCCCCCCCGCCTTGTGCCGcaaa > 1:90055/1‑136 (MQ=255) ggCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTATTTAATTAAAAAAAAACCGCA‑GACGCCGCACCAAACAAAATTAAGGGAGTGATGTTTTAATCAAATACCATCCCGCCGCTCGTTGTGCCGaaaa > 3:269999/1‑133 (MQ=255) cAGACGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATACCATCCCGCCGCTCTTTGTGCCGAAAAAAGATGCt < 2:151367/139‑1 (MQ=255) cAGAAGTAGCGGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAAAAACCCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATACCATCCCGCCGCTCTTTGTGCCGAAAAAAGATGCt < 2:294251/139‑1 (MQ=255) gAAGTAGCTGCGTTCTGGCCGGGCGGCGTTTTTTCTGTACGAACAAATAAACCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATACCATCCCGCCGCTCTTTGTGCCGAAAAAAGATGCTAt < 8:116254/139‑1 (MQ=255) aGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATACCATCCCGCCGCTCTTTGTGCCGAAAAAAGATGCTATg < 2:222939/138‑1 (MQ=255) aGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATACCATCCCGCCGCTCTTTGTGCCGAAAAAAGATGCTATg > 1:222939/1‑138 (MQ=255) gctgctTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATACCATCCCGCCGCTCTTTGTGCCGAAAAAAGATGAGATGACtta > 7:368788/1‑138 (MQ=255) ctgctTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GCCGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATACCATCCCGCCGCTCTTTGTGCCGCAAAAAGATGCTATGCCTTCt > 7:227187/1‑139 (MQ=255) ctgctTTCTGGCAGGGCGGCTTTTTTTCGGTAAGTTCAAATAAACCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATACCCTACCGCCGCTCTTTGTGGCGAAAAAAGATGCTATGCCTTCt > 1:2737/1‑139 (MQ=255) tgctTTCGGGCAGGGGGTCTGTTGTTCTGTAAGTAAAAAAAACCCGAA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATACCATCCCGCCGCTCTTTGTGCCGAAAAAAGATGCTATGCCTTCTg < 1:119844/139‑1 (MQ=255) gctTTCTGGCAGGGCGGCTTTTTTTCTGTAAGAACAAATAAACCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATACCATCCCGCCGCTCTTTGTGCCGAAAAAAGATGCTATGCCTTCTGa < 2:90055/139‑1 (MQ=255) ctTTCTGGCAGGGCGGCTTTTTTTCTGTATGTACAAATAAACCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATACCATCCCGCCGCTCTTTGTGCCGAAAAAAGATGCTATGCCTTc < 4:269999/135‑1 (MQ=255) ctTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAACCCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATACCATCCCGCCGCTCTTTGTGCCGAAAAAAGATGCTATGCCTTCTg < 2:257568/137‑1 (MQ=255) gCAGGGCGGCTTTTTTTCTGTAAGTACAAAAAAACCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATACCATCCCGCCGCTCTTTGTGCCGAAAAAAGATGCTATGCCTTCTGAGGCTTCaa < 2:2737/139‑1 (MQ=255) gcggcTTTTTTTCTGTAAGTACAAATAAACCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATACCATCCCGCCGCTCTTTGTGCCGAAAAAAGATGCTATGCCTTCTGAGGCTTCAAAGTAt < 8:323814/139‑1 (MQ=255) tCTGTAAGTACAAATAAACCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATACCATCCCGCCGCTCTTTGTGCCGAAAAAAGATGCTATGCCTTCTGAGGCTTCAAAGTATGAAATCAgcg < 2:253244/138‑1 (MQ=255) gcTGTACGTACAAATAAACCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATACCATCCCGCCGCTCTTTGTGCCGAAAAAAGATGCTATGCCTTCTGAGGCTTCAAAGTATGAAATCAgcg < 8:278543/137‑1 (MQ=255) aaaatACAAAAAACCCCCC‑GCCGCCGCAACAAACATAATAACGGCGGGGAGGTTTAAATCAAAAACCAACCCGCCGCTCTTTGTGCCGAAAAAAGATGCTATGCCTTCTGAGGCTTCAAAGTATGAACTCAGCGCCCa < 6:51042/134‑1 (MQ=255) tatcaaaaaaaaACCCCATGACGCCGCAACAAAAAGAATAATGGGAGTGAGGTTTAAATCAAATACCATCCCGCCGCTCTTTGTGCCGAAAAAAGATGCTATGCCTTCTGAGGCTTCAAAGTATGAAATCAGCGCCCa < 1:418836/132‑1 (MQ=255) aaTAAACCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATACCATCCCGCCGCTCTTTGTGCCGAAAAAATATGCTATGCCTTCTGAGGCTTCAAAGTTTGAAATATGCGCCCAGCATGCAAg > 6:305034/1‑139 (MQ=255) aaTAAACCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATACCATCCCGCCGCTCTTTGTGCCGAAAAAAGATGCTATGCCTTCTGAGGCTTCAAAGTATGAAATCCGCGCCCAGCATGCAAg > 6:397265/1‑139 (MQ=255) aaaaaCCCCC‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATACCATCCCGCCGCTCTTTGTGCCGAAAAAAGATGCTATGCCTTCTGAGGCTTCAAAGTATGAAATCAGCGCCCAGCATGCAAgg < 5:56083/137‑1 (MQ=255) aaaaaCCCCA‑CACGCCGCAACAAACAGAAAAAAGGCACTGAGGATTAAAACAAATACCATCCCGCCGCTCTTTGTGCCGAAAAAAGATGCTATGCCTTCTGAGGCTTCAAAGTATGAAATCAGCGCCCAGCATGCAAgg < 5:305034/137‑1 (MQ=255) aTAACCCCCA‑GACGCCGCAACAAACAGACTAAAGGGAGTGAGGTTTAAATCAAATACCATCCCGCCGCTCTTTGTGCCGAAAAAAGATGCTATGCCTTCTGAGGCTTCAAAGTATGAAATCAGCGCCCAGCATGCAAgg < 2:119890/139‑1 (MQ=255) aTAAACCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATACCATCCCGCCGCTCTTTGTGCCGAAAAAAGATGCTTTGCCTTCTGTGGCTTCAAAGTATGAAATCAGCTCCCAGCATGCa < 4:149035/136‑1 (MQ=255) aTAAACCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATACCATCCCGCCGCTCTTTGTGCCGAAAAAAGATGCTATGCCTTCTGAGGCTTCAAAGTATGAAATCAGCGCCCAGCATGCa < 4:39570/136‑1 (MQ=255) aTAAACCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATACCATCCCGCCGCTCTTTGTGCCGAAAAAAGATGCTATGCCTTCTGAGGCTTCAAAGTATGAAATCAGCGCCCAGCATGCa < 4:306690/136‑1 (MQ=255) ccGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGGTTAAATCAAATACCATCCCGCCGCTCTTTGTGCCGAAAACAGATGCTATGCCTTCTGAGGCTTCAAAGTATGAAATCAGCGCCCAGCATGCAAGGCCaaa < 8:77585/139‑1 (MQ=255) | GACAGCGATATATGACGCGCGACATGCTTTTGCCGTCATCATCTGCTCTCTTTCATCCTGCTCTTCAAACTCATCAGGCAGAAGTAGCTGCTTTCTGGCAGGGCGGCTTTTTTTCTGTAAGTACAAATAAACCGCA‑GACGCCGCAACAAACAGAATAAAGGGAGTGAGGTTTAAATCAAATACCATCCCGCCGCTCTTTGTGCCGAAAAAAGATGCTATGCCTTCTGAGGCTTCAAAGTATGAAATCAGCGCCCAGCATGCAAGGCCAAA > CP006881/929395‑929664 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |