| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 1,178,360 | A→C | 12.9% | K28N (AAA→AAC) | U712_05850 → | Oligopeptide transport system permease protein AppB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 1,178,360 | 0 | A | C | 12.9% | 253.0 / 10.8 | 116 | K28N (AAA→AAC) | U712_05850 | Oligopeptide transport system permease protein AppB |
| Reads supporting (aligned to +/- strand): ref base A (59/39); new base C (3/14); total (63/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.36e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 116 total aligned reads displayed.
GTTTTCTCCCTCTTCTGTTTTTAATAAGGAAAGTAAAGGGGGACAAGTATATGGCTGCATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAATGATCCTCAGTACGTTCAATATTTAAAGTGGCTAGGCAACA > CP006881/1178227‑1178490 | gTTTTCTCCCTCTTCTGTTTTTAATAAGGAAAGTAAAGGGGGACAAGTATATGGCTGCATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGTAATTACGATTTTATCATTTGTTATCATGAAAGc < 4:377295/136‑1 (MQ=255) ttCTCCCTCTTCTGTTTTTAATAAGGAAAGTAAAGGGGGACAAGTATATGTCTGCATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAACGCCGCGcc > 6:113179/1‑139 (MQ=255) ttCTCCCTCTTCTGTTTTTAATAAGGAAAGTAAAGGGGGACAAGTATATGGCTGCATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGcc > 8:292541/1‑139 (MQ=255) tctcCCTCTTCTGTTTTTAATAAGGAAAGTAAAGGGGGACAAGTATATGGCTGCATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCcgcg > 4:298196/1‑136 (MQ=255) ccTCTTCTGTTTTTAATAAGGAACGTAAAGGGGGACAAGTATATGGCTGCATATATTATCAGAAGAACCTTAATGTCTATCCCTATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCg < 7:354428/136‑1 (MQ=255) ttatttAATAAGCAAAGTAAAGGGGGCAAAGTATATGGCTCCAAATAATAACACAAGAACCATATTGTCAACCCCCATTTTATTGGTAATAACGATTTTATCATTTGTTAACATGACCGCCGCGCCCGGAGATCCGAt < 6:53453/135‑1 (MQ=255) tttttAATAAGGAAAGTAAAGGGGGACAAGTATATGGCTGCATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGa < 7:233673/136‑1 (MQ=255) tttttAATAAGGAAAGTAAAGGGGGACAAGTATATGGCTGCATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGAt < 7:243946/137‑1 (MQ=255) aataaGGAAAGTAAAGGGGGACAAGTATATGGCTGCATATATTATAAGAACAACCTTAATGGCTATCCCTATTTTATTGGGAATTACGATTTTATCATTTGTAATCATGAAAGCCGCGCCCGGAGATCCGATGACAtt < 1:332289/138‑1 (MQ=255) aaGTAAAGGGGGACAAGTATATGGCTGCATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATcc < 4:361469/121‑1 (MQ=255) ggggACAAGAATATGGCTGCATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTATAACATAAGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGTACCCGaaa > 1:87877/1‑138 (MQ=255) cAAGTATATGGCTGCATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTTTTGGGAATTACGATTTTATCATTTGTTATCATCAACGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATc < 4:75802/136‑1 (MQ=255) cAAGTATATGGCTGCATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGc > 6:21333/1‑139 (MQ=255) cAAGTATATGGCTGCATATAATATCAGAAGAACCTTAATGTCTATCCCGATTTTAGTGGGTATTACGATTTTATCTTTTTTTATCATGAAAGCCGCGACATGAGATCCGATGACATTAATGATGGACCCGAAAATCAga > 1:128667/1‑138 (MQ=255) aaaGTATATGGCTGCATATATAATCACAACAACCTTAATGTCAATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTAATCATGAACCCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGc < 1:175842/138‑1 (MQ=255) aatGGCTGCAAAATTAATCAGTAGAACCATAATGTCTATCCCGTTTTTATTGGGAATTACTTTTTTATCATTTCTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCAGAAAATGAGCCAGGc < 7:272359/137‑1 (MQ=255) tGGCTGCATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTTTTGGGAATTACGATTTTATCATTTGTTATCATGAACGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGa < 5:113179/139‑1 (MQ=255) ccagCAAATATTATCCGACTACCCTTAATGTCGATCCCATTATTATCGGGAATTACTATTTTACCTTTTCTTATCATCCACCCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTg < 4:277379/133‑1 (MQ=255) cTGCATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGc < 8:422268/128‑1 (MQ=255) cTGCATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGc > 7:422268/1‑128 (MQ=255) cTGCATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGa > 8:329315/1‑136 (MQ=255) cTGCATATATTATCAGAACAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTTTTATCATGAAAGCCGCGCCCTGAGATCCTATGACATTAATGATGGACCCGAAAATAAGCCAGGCTGa > 7:394311/1‑136 (MQ=255) cataatttatCAGAAGAACCTTAATGTCTATCCCGATTTTATAGGGAATTACGATTTTATCATTTGTTATCATGAAATCCGCGCCCGGTGATCCGATCAGATTAATTATTGACACGAAAATCAGAAATGCTGACagag > 8:272359/7‑138 (MQ=255) cATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAATGCAGCGCCCGGAGAACCGATGACATTATTGATGGACCCGAAAATCAGCCAGGCTGACagaga > 1:363669/1‑139 (MQ=255) cATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGCTGCCAGTAATGATGGACCCGAAAATCAGCCAGGCTCACagaga > 7:206934/1‑139 (MQ=255) cATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGa > 3:277379/1‑133 (MQ=255) cATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACagctg > 5:34804/1‑136 (MQ=255) cATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACaga > 7:297831/1‑137 (MQ=255) cATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACaga > 1:244348/1‑137 (MQ=255) cATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACaga > 7:61532/1‑137 (MQ=255) cATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACaga > 2:352473/1‑137 (MQ=255) cATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACaga > 2:265795/1‑137 (MQ=255) cATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACaga > 7:147488/1‑137 (MQ=255) cATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACaga > 7:343840/1‑137 (MQ=255) cATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACaga > 7:247301/1‑137 (MQ=255) cATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTATATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGATGACaga > 8:66760/1‑137 (MQ=255) cATATATTATCAGAAGAACATTAATGTCTATCCCGATTTTATTGTGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATAAGCAAGGCTGACaca > 8:342928/1‑135 (MQ=255) cATATATTATCAGAAGAAACTTAATGTCTATCCAGATTTTATAGGTAATAACTATTTTATAATTTGTTATAATGAAAGCATCGCACTGATATCCGATGACATAAATTATGGACGAGAAGATCAGCCATGATGACaga > 1:394308/1‑137 (MQ=255) cATATATTAGCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGATTTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACaga > 1:33913/1‑137 (MQ=255) atatttTATCAGAACAACCTTAATGTATATCCCGATTTTATTGGGAATTACTATTTAATCTTTTGTTATCATCAACGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACagagag < 6:53546/139‑1 (MQ=255) atatTATCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGACGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACaga > 4:120056/1‑134 (MQ=255) attatCAGAAGAACCATAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGt > 1:19885/1‑139 (MQ=255) tatCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACa < 1:157366/128‑1 (MQ=255) tatCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGCGCAGttt > 1:268019/1‑139 (MQ=255) tatCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGtt > 5:241845/1‑138 (MQ=255) tatCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGtt > 1:214460/1‑138 (MQ=255) cAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTAtt > 5:53546/1‑139 (MQ=255) agaagaACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCTAAATTCAGCCAGGCTGACAGAGAGCAGTTTAtt > 6:339736/1‑138 (MQ=255) aagaaCCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTAtt > 3:283509/1‑136 (MQ=255) aagaaCCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACACGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGa > 1:342853/1‑138 (MQ=255) aaCCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGa > 3:310053/1‑135 (MQ=255) aaCCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATAGa > 4:95349/1‑135 (MQ=255) ccatAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATa < 2:19885/136‑1 (MQ=255) tAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTG‑AAAATACGGt > 7:362127/1‑139 (MQ=255) aTGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGATAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTc > 1:320155/1‑139 (MQ=255) aTGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAACGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGt < 8:247301/138‑1 (MQ=255) gTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGAt < 2:110668/72‑1 (MQ=255) gTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGAt > 1:110668/1‑72 (MQ=255) tCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAACGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTc > 4:398745/1‑136 (MQ=255) tCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTg > 2:135814/1‑138 (MQ=255) tATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAAt > 1:299586/1‑139 (MQ=255) tATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAAt > 7:297417/1‑139 (MQ=255) tATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAAt > 7:303162/1‑139 (MQ=255) tATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAAt > 5:362050/1‑139 (MQ=255) tATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAAt > 5:29566/1‑139 (MQ=255) tATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAAt < 8:61532/139‑1 (MQ=255) tATCCAGATTTTATTGGTAATTACGATTTTATAATTTGTAATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAAt < 2:214460/139‑1 (MQ=255) atactcGATTTTATTGGGAATTACTTTTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCt < 3:274812/130‑1 (MQ=255) aTCCCGTTTTTTTTGTCAATTACTATTTTATATTTTGTAATCATCAACCCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAATg < 2:188046/139‑1 (MQ=255) aTCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAAt > 8:405955/1‑138 (MQ=255) aTCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAAt > 5:74116/1‑138 (MQ=255) tCCCGTTTTTATTGGGAATTACTTTTTTATATTTTTTAATAATGAACGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCt < 3:298196/133‑1 (MQ=255) tCCCGATTTTATTGGTAATTATTATTTTTTCTTTTTTTATCATGAAAGCCGCGCACGGAGATCCGATGACATTAATGATGGACGCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAATg < 8:394311/138‑1 (MQ=255) tCCCGATTTTATTGGGAATTACGTTTTTATCATTTTTTTTCATTAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGaa < 2:342853/136‑1 (MQ=255) tCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAATg < 7:73307/138‑1 (MQ=255) cccGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTGTTGAAAAATACGGTCTGAAt > 4:379548/1‑136 (MQ=255) cctaTTTTATTGGTAATTACGATTTTATAATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAAt < 4:283509/132‑1 (MQ=255) ccGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGCGCAGTTTATTGAAAAATACGGTCTGAAt > 4:134245/1‑135 (MQ=255) cGATTTTATTGGTAATTACGATTTTATCATTTGTTATCATGAACCCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAATGATcc < 2:70986/139‑1 (MQ=255) gATTTTTTTGGTAATTAAGATTTTATAATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAATGATCCt < 6:74116/139‑1 (MQ=255) aTTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAATGATCCt > 8:122916/1‑138 (MQ=255) ttttGGGAATTACGATTTTATCATTTGTTATCCTTAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAATGATCCTCAGt < 8:297417/136‑1 (MQ=255) tATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATcc < 3:161729/55‑1 (MQ=255) tATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATcc > 4:161729/1‑55 (MQ=255) tgAATTACTATTTTATCATTTGTTATCATGAAAGCCGGGTCAGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAACTACGGTCTGAATGATCCTCAGTACGTTc < 7:94137/138‑1 (MQ=255) ttttATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAATGATCCTCAGTACGTTCAATAttt < 3:204459/136‑1 (MQ=255) ttatATCATTTGATACCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAATGATCCTCAGTACGTTCAATATTTaaa < 1:409950/136‑1 (MQ=255) ttATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAATGATCCTCAGTACGTTCAATATTTAAAGt > 2:98164/1‑139 (MQ=255) aTCATTTGTTATCATGAACGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAATGATCCTCAGTACGTTCAATATTTAAAg < 3:398745/136‑1 (MQ=255) tCATTTGTTATCATGAACGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAATGATCCTCAGTACGTTCAATATTTAAAg < 3:392375/135‑1 (MQ=255) tCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAATGATCCTCAGTACGTTCAATATTTAAAGTgg < 2:96848/138‑1 (MQ=255) cATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTG‑AAAATACGGTCTGAATGATCCTCAGTACGTTCAATATTTAAAGTGGCt < 8:362127/138‑1 (MQ=255) tttGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTAATGAAAAATACGGTCTGAATGATCCTCAGTACGTTCAATATTTAAAGTGGc > 4:400702/1‑136 (MQ=255) tGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAATGATCCTCAGTACGTTCAATATTTAAAGTGGCTAgg < 2:244348/138‑1 (MQ=255) tGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAATGATCCTCAGTACGTTCAATATTTAAAGTGGCAAgg > 2:183156/1‑138 (MQ=255) tgcATGAAATCCGCGCCCGGAGATCCGATGACATTAATGAGGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGGTTATTGAAAAATACGGTCTGAATGATCCTCAGTACGTTCAATATTTAAAGTGGCTAGGCAAc < 2:33913/136‑1 (MQ=255) tCATGAACGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAATGATCCTCAGTACGTTCAATATTTAAAGTGGCTAGGCa < 4:194058/135‑1 (MQ=255) tCATGAACGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAATGATCCTCAGTACGTTCAATATTTAAAGTGGCTAGGCAACa < 6:375423/138‑1 (MQ=255) tCATGAAAGCCGCGCCCGGAGATCCGATGACATTATTGATGGACCCGAAAATCAGGCATGCTGACAGAGAGCAGTTTATTGAAAAATACTGTCTGATTGATCCTCAGTACGTTCAATATTTAAAGTGGCTAGGCAACa < 7:66760/138‑1 (MQ=255) tCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCAGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAATGATCCTCAGTACGTTCAATATTTAAAGTGGCTAGGCAACa < 7:111081/138‑1 (MQ=255) | GTTTTCTCCCTCTTCTGTTTTTAATAAGGAAAGTAAAGGGGGACAAGTATATGGCTGCATATATTATCAGAAGAACCTTAATGTCTATCCCGATTTTATTGGGAATTACGATTTTATCATTTGTTATCATGAAAGCCGCGCCCGGAGATCCGATGACATTAATGATGGACCCGAAAATCAGCCAGGCTGACAGAGAGCAGTTTATTGAAAAATACGGTCTGAATGATCCTCAGTACGTTCAATATTTAAAGTGGCTAGGCAACA > CP006881/1178227‑1178490 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |