| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 125,619 | C→T | 53.6% | R21C (CGT→TGT) | U712_00560 → | DNA‑directed RNA polymerase subunit beta' |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 125,619 | 0 | C | T | 53.6% | 23.6 / 154.4 | 114 | R21C (CGT→TGT) | U712_00560 | DNA‑directed RNA polymerase subunit beta' |
| Reads supporting (aligned to +/- strand): ref base C (26/26); new base T (32/28); total (60/54) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.50e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 114 total aligned reads displayed.
AGTAACAAAAGAATAATCTCTAGTTATAAAGGCAAGTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACTAAGGACTGGGAATGTCATTGCGGGAA > CP006881/125482‑125749 | agtaACAAAAGAATAATCTCTAGTTATAAAGGCAAGTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCg > 5:149248/1‑139 (MQ=255) aaaGAATAATCTCTAGTTATAAAGGCAAGTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATgg > 2:59276/1‑139 (MQ=255) aGTTATAAAGGCAAGTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGt < 3:92428/119‑1 (MQ=255) aGTTATAAAGGCAAGTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGt > 4:92428/1‑119 (MQ=255) aGTTATAAAGGCAAGTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGgtgaagt > 7:26323/1‑139 (MQ=255) gTTATAAAGGCAAGTGACATCGTTTAATCCGAATATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGgtgaa < 6:264169/136‑1 (MQ=255) ataAAGGCAAGTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGgtgaagtgaa < 6:208927/138‑1 (MQ=255) ataAAGGCAAGTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGgtgaagtgaa < 2:340931/138‑1 (MQ=255) ggCAAGTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAATATCTGTTCATGGTCTTTTGGTGAAGTGAATCAGcc > 2:380780/1‑139 (MQ=255) aGTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTAATGGTCTTTTGGTGAAGTGAAAAAGCCTGa > 6:284810/1‑138 (MQ=255) gggACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGaaa < 6:175670/137‑1 (MQ=255) gACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTACACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGa > 4:253211/1‑135 (MQ=255) aTCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGAt > 5:333360/1‑138 (MQ=255) aTCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATa < 5:416727/139‑1 (MQ=255) aTCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGGCTTTTGGTGAAGTGAAAAAGCCTGAAACGATa < 6:384137/139‑1 (MQ=255) ggTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGAt < 3:253211/135‑1 (MQ=255) gTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATa > 3:42028/1‑135 (MQ=255) tCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGt < 8:26323/139‑1 (MQ=255) aaGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGt > 1:115425/1‑139 (MQ=255) aaGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGt > 6:200501/1‑139 (MQ=255) gATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGtt > 1:16660/1‑138 (MQ=255) aTAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAACCGATAAACTATCGTACGt > 4:223298/1‑136 (MQ=255) aTAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGt > 3:348035/1‑136 (MQ=255) aaaaGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTACTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTaa < 4:383017/136‑1 (MQ=255) aGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGaa > 5:17058/1‑137 (MQ=255) aGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGGCTTGCTTCACCATATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGaaaa < 2:323053/139‑1 (MQ=255) ggTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGaa < 4:53262/136‑1 (MQ=255) ggaGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGCACATCTGTCTTGCATCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAGAACCTGAAAAgg < 8:371448/137‑1 (MQ=255) gTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTTCGTTAAAACCTGAAAAgg < 5:73379/139‑1 (MQ=255) gTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAgg < 5:281529/139‑1 (MQ=255) gTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAgg < 2:41490/139‑1 (MQ=255) gTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAgg < 6:17058/139‑1 (MQ=255) gTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAgg < 6:333360/139‑1 (MQ=255) cTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTa > 1:402431/1‑139 (MQ=255) ttGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGt < 1:180090/135‑1 (MQ=255) tGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTAt > 7:303923/1‑138 (MQ=255) tAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTAt > 4:213319/1‑135 (MQ=255) tAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGACTGAAACGATAAACTATCGTACGTAAAAACCTGAAAAGGACGCTCTAt > 3:348140/1‑135 (MQ=255) tAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAgg < 5:366682/126‑1 (MQ=255) tAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAgg > 6:366682/1‑126 (MQ=255) aTGTGAACAATTTTGAGTATATGAACATCTGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGaaa < 3:227548/120‑1 (MQ=255) aTGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGaaa > 4:227548/1‑120 (MQ=255) aTGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCg > 5:276498/1‑138 (MQ=255) tgtgAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAATTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGCTCTATTCttctaa > 2:131395/1‑134 (MQ=255) tgAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACg < 1:32847/139‑1 (MQ=255) aaCAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATa > 1:194680/1‑90 (MQ=255) aaCAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATa < 2:194680/90‑1 (MQ=255) aaCAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCa > 7:111554/1‑139 (MQ=255) aaCAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTACATGCTCTTTAGGTGAAGTGAAAAAGCCAGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACTGACTATACTGAGAACGCa > 1:92345/1‑139 (MQ=255) aaCAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATaaa > 6:212709/1‑92 (MQ=255) aaCAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATaaa < 5:212709/92‑1 (MQ=255) aaCAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCa > 2:190264/1‑139 (MQ=255) aaCAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCa > 7:51559/1‑139 (MQ=255) aaCAATTTTGAGTATATGAACATCGGTCTTGCTTAACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGAGAACTCa > 5:416280/1‑139 (MQ=255) aCAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCGGTTCATGGTCTTTTGGTGAAGTGAAATAGCCTGAAACGATAAACTGTCGTACGTTAAAAGCTGAAAAGGACGGTCTATTCTGGGaggg > 4:341495/1‑133 (MQ=255) aaTTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCa > 4:348014/1‑136 (MQ=255) aTTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGAGAAAAATCATTAAAATATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGAGAACTCAt > 3:227660/1‑136 (MQ=255) tGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCAtttt < 4:284845/135‑1 (MQ=255) tGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGa > 1:233660/1‑139 (MQ=255) tGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGa > 5:403489/1‑139 (MQ=255) aGTATATGTACTTCTGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGGGAACTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAATACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGAc < 2:151807/138‑1 (MQ=255) aGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCg < 3:348014/135‑1 (MQ=255) aGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCg < 4:296934/135‑1 (MQ=255) aGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGAc < 2:16660/138‑1 (MQ=255) aGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGAcc < 1:59276/139‑1 (MQ=255) aGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGAc < 1:190264/138‑1 (MQ=255) aGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGAc < 2:233660/138‑1 (MQ=255) aGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGAc < 6:403489/138‑1 (MQ=255) tatGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGGCTATTCTGCGAACGCATTTTCGGACCGACt < 2:115425/139‑1 (MQ=255) tatGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCCTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACt < 8:51559/139‑1 (MQ=255) atGAACATCGGTCTTGCTTCACCTGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGATTAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGATAAGGACGGTCTATTCTGCGATCGCATTTTCGGACCGACt > 7:422889/1‑138 (MQ=255) atGAACATCGGTCTTGCTTCACCATATAAAATTCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACt < 5:284810/138‑1 (MQ=255) atGAACATCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGATAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACt > 8:240119/1‑138 (MQ=255) atGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACt > 1:210432/1‑138 (MQ=255) taCATCTGTCCTGCTTCACCAGAGAAAATCTGGTGATGGTCGTTTGGAGAAGTGAAAAAGCCTGAAACGATAAACTATCCTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACTAAg < 8:392886/137‑1 (MQ=255) aTCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACTAAgg < 4:348140/136‑1 (MQ=255) aTCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACTAAGGACt < 8:303923/139‑1 (MQ=255) tCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGAc < 7:16670/126‑1 (MQ=255) tCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGAc > 8:16670/1‑126 (MQ=255) tCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACTAAGGACt < 5:88321/138‑1 (MQ=255) tCGGTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACTAAGGACt > 6:88321/1‑138 (MQ=255) cGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAGAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACTAAGGAc > 4:383229/1‑136 (MQ=255) cGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCg < 4:418968/122‑1 (MQ=255) cGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCg > 3:418968/1‑122 (MQ=255) gTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGAc > 6:417012/1‑123 (MQ=255) gTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGAc < 5:417012/123‑1 (MQ=255) gTCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACTAAGGACTg > 4:242903/1‑136 (MQ=255) gTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACTAAGGACTg > 4:60439/1‑136 (MQ=255) gTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACTAAGGACTg > 3:238613/1‑136 (MQ=255) tCTTGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACTAAGGACTgg > 4:227688/1‑136 (MQ=255) ttGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACt > 6:258564/1‑125 (MQ=255) ttGCTTCACCAGATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACt < 5:258564/125‑1 (MQ=255) tCACCAGATAAACTCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACTAAGGACTGGGAATGTc < 4:348035/136‑1 (MQ=255) aGATAAAATCTGTTCATGGGCTTTTGGTGCAGTGAAACAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACTAAGGACTGGGAATGTCATTGCggg < 2:356334/139‑1 (MQ=255) aGATAAAATCCGTTCTTTGGCTTTTGGTGAATTGATAAATGATGAAAATATATACTATCGTTCGTTAAAACCTGAAATGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACTAAGGACTGGGAATGTCATTGc < 3:378435/136‑1 (MQ=255) gATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGaaa < 3:166414/76‑1 (MQ=255) gATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGaaa > 4:166414/1‑76 (MQ=255) gATAAAATCTGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACTAAGGACTGGGAATGTCATTGCg > 3:375880/1‑136 (MQ=255) aTAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACTAAGGACTGGGAATGTCTTTGCGGGac > 6:121254/1‑138 (MQ=255) aTAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACTAAGGACTGGGAATGTCATTGCggg > 7:340313/1‑137 (MQ=255) | AGTAACAAAAGAATAATCTCTAGTTATAAAGGCAAGTGACATCGGTTAATCCGAAGATAAAAAGGGAGGTAGGCCCCTTGCTAGATGTGAACAATTTTGAGTATATGAACATCGGTCTTGCTTCACCAGATAAAATCCGTTCATGGTCTTTTGGTGAAGTGAAAAAGCCTGAAACGATAAACTATCGTACGTTAAAACCTGAAAAGGACGGTCTATTCTGCGAACGCATTTTCGGACCGACTAAGGACTGGGAATGTCATTGCGGGAA > CP006881/125482‑125749 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |