| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 1,941,847 | T→G | 8.0% | K219T (AAG→ACG) | U712_09650 ← | Plipastatin synthase subunit B |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 1,941,847 | 0 | T | G | 8.0% | 312.9 / 2.3 | 127 | K219T (AAG→ACG) | U712_09650 | Plipastatin synthase subunit B |
| Reads supporting (aligned to +/- strand): ref base T (46/66); new base G (11/2); total (59/68) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.99e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 127 total aligned reads displayed.
CCCAAATACTCATAAACAGCGTGTTTAATGTCACTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCGAGCCATTCAATATAACGGCTGTACGGCACCGTGCTGCCAAGCTGTACAGGT > CP006881/1941713‑1941984 | cccAAATACTCATAAACAGCGTGTTTAATGTCACTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCACCCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGCGTTTTTAGTACCCGGTGGCGGTGCGGGGGTTTa > 2:189347/1‑139 (MQ=255) taaTACTCATATACAGCGTGTTTAATGTCACTCCTCAGTTTTGGGCAGCCTCTGTCAGTTTATCTTCGATATCCGGCGCTAATGAAAAGCTTACCTTTTCGGC‑TTTATTATTCCCGTCTGCCGTGCGGCGCTTTAt < 3:276675/135‑1 (MQ=255) aaaTACTCATAAACAGCGTGTTTAATGGCACTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCg < 8:313159/139‑1 (MQ=255) cATAAACAGCGTGTTTAATGTCACTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTTCGGCGCTTTATTCGGGGaa > 7:197620/1‑137 (MQ=255) cATAAACAGCGTGTTTAATGTCACTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGaa > 7:143042/1‑137 (MQ=255) cATAAACAGCGTGTTTAATGTCACTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATa > 1:341510/1‑139 (MQ=255) cATAAACAGCGTGTTTAATGTCACTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATa > 7:75006/1‑139 (MQ=255) cATAAACAGCGTGTTTAATGTCACTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACAATATCCGGCGCTAATGAAAAGCTGCCCTGGTGGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGaa > 2:290515/1‑137 (MQ=255) tAAACAGCGTGTTTAATGTCACTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAAt < 4:33828/136‑1 (MQ=255) tAAACAGCGTGTTTAATGTCACTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAAt < 4:384666/136‑1 (MQ=255) tAAACAGCGTGTTTAATGTCACTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAAt < 3:370434/136‑1 (MQ=255) tAAACAGCGTGTTTAATGTCACTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGa < 2:396515/139‑1 (MQ=255) aaCAGCGTGTTTAATGTCACTCCCGAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCTGCGCTTTATTCGGGGAATAGAAg < 7:140457/139‑1 (MQ=255) aaCAGCGTGTTTAATGTCACTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAg < 8:142819/139‑1 (MQ=255) aaCAGCGTGTTTAATGTCACTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAg < 7:38751/139‑1 (MQ=255) cGTGTTTAATGTCCCTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTa > 6:145742/1‑139 (MQ=255) cGTGTTTAATGTCACTCCCCTGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTa < 1:383813/139‑1 (MQ=255) cGTGTTTAATGTCACTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTTTAATTCCCGTCTGCCGTGCGGCGCGTTATTCg > 5:142518/1‑123 (MQ=255) cGTGTTTAATGTCACTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCg < 6:142518/123‑1 (MQ=255) cGTGTTTAATGTCACTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAgga > 2:337071/1‑137 (MQ=255) cGTGTTTAATGTCACTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCGTTTTTGGGGGGATAGAAggcgta > 1:178349/1‑134 (MQ=255) cGTGTTTAATGTCACTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCGTTATTAGGGGTATAGAAGCAGTa > 1:384918/1‑139 (MQ=255) cGTGTTTAATGTCACTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTCCGGCGCTATATTCGGGGAATAGCAGCAGTa > 1:71651/1‑139 (MQ=255) cGTGTTTAATGTCACTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑GTTATAATTCCCGGCTGCCGTGCGGCGCGTTATTGGGGGATTTGAAGCAGTa > 2:187828/1‑139 (MQ=255) tgtTTAATGTCACTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTAtt > 7:281180/1‑139 (MQ=255) aaTGTCACTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTAt < 3:179923/113‑1 (MQ=255) aaTGTCACTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTAt > 4:179923/1‑113 (MQ=255) aaTGTCACTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑ATTATAATTCCCGTCTGCCGTTCGGCCCTTTATTCGGGGAATAGAAGCAGTATTTCCg > 2:24712/1‑138 (MQ=255) aTGTCACTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTa < 2:341510/139‑1 (MQ=255) aTGTCACTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTa < 8:197620/139‑1 (MQ=255) aTGTCACTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTa < 5:134163/139‑1 (MQ=255) tGTCACTCCCCAGTTTTGGGCAGCCTCTGGCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTAc < 2:129204/139‑1 (MQ=255) cTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCgg < 6:306126/110‑1 (MQ=255) cTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCgg > 5:306126/1‑110 (MQ=255) cTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTa < 8:300716/125‑1 (MQ=255) cTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCtt < 1:79780/139‑1 (MQ=255) cTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCATTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCtt > 8:394433/1‑139 (MQ=255) tCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCtt > 2:345589/1‑138 (MQ=255) cccAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCa < 1:24712/138‑1 (MQ=255) ttttGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATAtt < 1:260869/139‑1 (MQ=255) ttttGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATAtt < 5:41421/139‑1 (MQ=255) gggCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAg < 8:32937/108‑1 (MQ=255) gggCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAg > 7:32937/1‑108 (MQ=255) ggCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTc < 1:345589/139‑1 (MQ=255) ggCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTACCGTCTGCCGTGCGGCGCGTTATTGGGGGAATTTAAGCAGTATTGCCGTAAGACTTAAAATATTCGcaa > 5:65657/1‑137 (MQ=255) ggCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTACCGTCTGCCGTGCGGCGCGTTATTCGGGGAATTGAAGCAGTATTGCCGGACTCCTTCAAAAATTCGCTc > 2:266157/1‑139 (MQ=255) ggCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑GTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCGTCAAATATTCGCTc > 1:226099/1‑139 (MQ=255) gCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTACCGTCTGCCGTGCGGCGCTTTATTCGGGGTAAAGAAGCAGTAATGCCCTACTCCTTCAAATATTAGc > 4:179613/1‑136 (MQ=255) aGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTc > 3:321107/1‑136 (MQ=255) ccTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAg > 8:48100/1‑137 (MQ=255) ccTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAg > 7:318998/1‑137 (MQ=255) ccTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAg > 8:182338/1‑137 (MQ=255) ctGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAg > 3:133349/1‑134 (MQ=255) tCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGgcag < 1:376054/138‑1 (MQ=255) tCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGgcag < 7:304263/138‑1 (MQ=255) tttCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGtc > 6:90789/1‑139 (MQ=255) tttCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGtc > 8:7176/1‑139 (MQ=255) tctcAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGcagcag < 4:133349/135‑1 (MQ=255) ccATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTg < 1:216091/139‑1 (MQ=255) atatCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTcttctt < 4:321107/136‑1 (MQ=255) tatCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATc < 7:48100/139‑1 (MQ=255) tCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGAt < 4:19765/136‑1 (MQ=255) cgcTAATGAAAAGCTGACCTGGTCGGC‑GTTATAATTACCGTCTGCCGTGCGGCGCGTTATTAGGGGAATAGAAGCAGTATTGGCGTACTCCATCAAATATTAGCTCCAGTATGGAGCAGTCTCTTATTTATCTTGtttt > 2:350901/1‑137 (MQ=255) tAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTtct > 3:420957/1‑136 (MQ=255) aTGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCg < 7:7176/137‑1 (MQ=255) aaaaGCTGACCTGGTCGGC‑TTTATACTTCCCGTCTGCAGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCTGCAGTCTCTTCTTGATCTTGTGCTCCGAg < 3:287216/136‑1 (MQ=255) aaaaGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCGAGCCa < 1:337071/139‑1 (MQ=255) aaaaGCTGACCTGGTCGGC‑TTTATAATTCACGTATGCCGTGCCGCGCTTTAATATGGGAATAGAAGCAGTATTGCCGTGCTCCTTCAAATATTCGTTACAGTATGGAGCAGTATCTTCTTGATATTTTTAACCGAg > 3:313917/1‑136 (MQ=255) aaGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCGAGcc < 4:181696/136‑1 (MQ=255) aCCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCGAGCCATTCAatat < 7:182161/139‑1 (MQ=255) aCCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCGAGCCATTCAatat < 7:394433/139‑1 (MQ=255) cTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCGAGCCATTCAATATaa < 1:266157/139‑1 (MQ=255) gTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATTGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTGTCTTCTTGATCTTGTTCTCCGAGCCATTCAATATAAc < 1:290515/137‑1 (MQ=255) gTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCGAGCCATTCAATATAACgg < 8:281180/139‑1 (MQ=255) gTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCGAGCCATTCAATATAACgg < 8:345509/139‑1 (MQ=255) gTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTAGGGGAATAGAAGCAGTATTGACGTACTGCTTAAAATATTCGCGCCAGTAGGCAGCAGTCTGATCTTGATATTGTTATCCGAGCCATTCAATATAACgg > 8:190443/1‑139 (MQ=255) tataATTCCCTTCTGCCGTGCTGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTAGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCGAGCCATTCAATATAACGGCTGTa < 7:238433/136‑1 (MQ=255) taAATCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATATAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTGTTATTGATCTTGTTATACCAACCATTAAAAATAACCGCAGTACGGCa > 8:316710/1‑139 (MQ=255) tCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCGAGCCa < 8:267403/112‑1 (MQ=255) tCCCGTCTGCCGTGCGGCGCTTTATTAGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCGAGCCa > 7:267403/1‑112 (MQ=255) cccGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCGAGCCATTCAATATAACGGCTGTACGGCACCGtg > 1:89805/1‑139 (MQ=255) cccGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCGAGCCATTCAATATAACGGCTGTACGGCACCGtg > 1:303652/1‑139 (MQ=255) ccGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCGAGCCATTCAATATAACGGCTGTACGGCAcc < 3:240853/135‑1 (MQ=255) gTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCGAGCCCTTCAATATAACCGCTGTACGGGACCggggag > 6:269508/1‑134 (MQ=255) gTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCGAGCCATTCAATATAACGGCTGTACGGCACCGtgctg < 8:175098/139‑1 (MQ=255) gTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCGAGCCATTCAATATAACGGCTGTACGGCACCGtg > 4:361162/1‑136 (MQ=255) tGCCGTGCGGCGCTTTTTTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCGAGCCATTAAATATAACGGCTGTACGGCACCGtgctg > 4:98817/1‑136 (MQ=255) tGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCGAGCCATTCAATATAACGGCTGTACGGCACCGtgctg > 4:128365/1‑136 (MQ=255) ccGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCGAGCCATTCAATATAACGGCTGTACGGCACCGTGCTGcc < 3:361162/136‑1 (MQ=255) ccGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCGAGCCATTCAATATAACGGCTGTACGGCACCGTGCTGCCa < 7:245626/137‑1 (MQ=255) ccGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCGAGCCATTCAATATAACGGCTGTACGGCACCGTGCTGCCAAg < 7:182338/139‑1 (MQ=255) ccGTGCGGCGCGTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGGCTCTTCTTGATCTTGTTCTCCGAGCCATTCAATATAACGGCTGTACGGCACCGTGCTGCCAAg < 2:226099/139‑1 (MQ=255) ccGGGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCGAGCCATTCAATATAACGGCTGTACGGCACCGTGCTGCCAAg < 8:280234/139‑1 (MQ=255) ccGGGCGGCGCTTAATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCGAGCCATTCAATATAACGGCTGTACGGCACCGTGCTGCCAAg < 1:187828/139‑1 (MQ=255) tGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCg > 6:90940/1‑56 (MQ=255) tGCGGCGCGTTATTCGGGCAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCGAGCCATTCAATATAACGGCTGTACGGCACCGTGCTGCCAAGCTg < 2:388692/139‑1 (MQ=255) gggcgCTTTATTCGGGTAATACAACCTGTTTGGCCTTACGCATCAAAATATCCGCTCCTGTAGGCAGCAGTCTCTTCTTGATCTTGTGCTCCGCGCCATTAAATAAAACGGCTGTACGGCACCGTGCTGCCAAGCTGTa < 2:209523/138‑1 (MQ=255) cggcgCTTTATTCGGGGAATAGAAGCAGTAATGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCGAGCCATTCAATATAACGGCTGTACGGCACCGTGCTGCCAAGCt < 3:267671/136‑1 (MQ=255) cgcTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCGAGCCATTCAATATAACGGCTGTACGGCACCGTGCTGCCAAGCTGTACAg < 5:90789/139‑1 (MQ=255) cTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCGAGCCATTCAATATAACGGCTGTACGGCACCGTGCTGCCAAGCTGTACAGGt > 7:410736/1‑139 (MQ=255) | CCCAAATACTCATAAACAGCGTGTTTAATGTCACTCCCCAGTTTTGGGCAGCCTCTGTCAGTTTCTCAACCATATCCGGCGCTAATGAAAAGCTGACCTGGTCGGC‑TTTATAATTCCCGTCTGCCGTGCGGCGCTTTATTCGGGGAATAGAAGCAGTATTGCCGTACTCCTTCAAATATTCGCTCCAGTAGGCAGCAGTCTCTTCTTGATCTTGTTCTCCGAGCCATTCAATATAACGGCTGTACGGCACCGTGCTGCCAAGCTGTACAGGT > CP006881/1941713‑1941984 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |