Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP006881 2,194,481 G→A 5.6% A267A (GCC→GCT U712_10995 ← Anthranilate synthase component 1

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068812,194,4810GA 5.6% 236.1 / 2.8 74A267A (GCC→GCTU712_10995Anthranilate synthase component 1
Reads supporting (aligned to +/- strand):  ref base G (43/24);  new base A (2/2);  total (46/28)
Fisher's exact test for biased strand distribution p-value = 6.20e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.43e-01

TGGATTTCCAAGTGCCCGTCCTTAACGTGGATTAATCGTTCCGGAGAGCTGCCGACTATTTCTCTGTCTTGGAGTTTCATATAATACATATACGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGTTTTTCATAATTAGAAGATACTGTCTCAAAG  >  CP006881/2194347‑2194619
                                                                                                                                      |                                                                                                                                          
tggatTTACAAGTGCCCGTCCTTAACGTGGATTAATCGTTCCGGAGAGCAGCCGACTATTTCTCTGTCTTGGAGTTTCATATAATACATATACGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCAt                                                                                                                                        <  7:344216/139‑1 (MQ=255)
       ccAAGTGCCCGTCCTTAACGTGGATTAATCGTTCCGGAGAGCTGCCGACTATTTCTCTGTCTTGGAGTTTCATATAATACATATACGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGAttt                                                                                                                                 >  1:289098/1‑139 (MQ=255)
             gCCCGTCCTTAACGTGGATTAATCGTTCCGGAGAGCTGCCGACTATTTCTCTGTCTTGGAGTTTCATATAATACATATACGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGTCATCTGATTTTATCg                                                                                                                            >  8:191166/1‑138 (MQ=255)
                 gTCCTTAACGTGGATTAATCGTTCCGGAGAGCTGCCGACTATTTCTCGGGCTTGGAGTTTCATATAATACATATACGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATAgg                                                                                                                           >  4:137222/1‑135 (MQ=255)
                         cGTGGATTAATCGTTCCGGAGAGCTGCCGACTATTTCTCTGTCTTGGAGTTTCATATAATACATATACGGAGAAGGATTGCCGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCaaa                                                                                                                  >  4:132490/1‑136 (MQ=255)
                         cGTGGATTAATCGTTCCGGAGAGCTGCCGACTAATTATCAGTATTGGAAGATAATATAATACATATTCGTACAATTAATCAACATCCTAACCACCACCTATAACTCAAACTCCTCAGATTTAATCAGCATATCaa                                                                                                                   >  4:239484/1‑135 (MQ=255)
                             gATTAATCGTTCCGGAGAGCTGCCGACTATTTCTCTGTCTTGGAGTTTCATATAATACATATACGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTtgt                                                                                                           >  7:26652/1‑139 (MQ=255)
                                tAATCGTTCCGGAGAGCTGCCGACTATTTCTCTGTCTTGGAGTTTCATATAATACATATACGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAAttttttt                                                                                                           >  3:170769/1‑134 (MQ=255)
                                     gTTCCGGTGAGCTGCCGACTATTTCTCTGTCTTGGAGTTTCATATAATACATATACGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGaa                                                                                                    <  1:155755/138‑1 (MQ=255)
                                         cGGAGAGCTGCCGACTATTTCTCTGTCTTGGAGTTTCATATAATACATATACGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCt                                                                                               <  2:289098/139‑1 (MQ=255)
                                                  gCCGACTATTTCTCTGTCTAGCAGTTTCATATAATACATATACGGCGAAGGATTGACGATCCTAAGCACTCGGTATAACTCAAAAGCATCTGCTTTTAt                                                                                                                              <  4:158539/99‑1 (MQ=255)
                                                  gCCGACTATTTCTCTGTCTAGCAGTTTCATATAATACATATACGGCGAAGGATTGACGATCCTAAGCACTCGGTATAACTCAAAAGCATCTGCTTTTAt                                                                                                                              >  3:158539/1‑99 (MQ=255)
                                                       cTATTTCTCTGTCTTGGAGTTTCATATAATACATATACGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGcc                                                                                 <  1:128351/139‑1 (MQ=255)
                                                       cTATTTCTCTGTCTTGGAGTTTCATATAATACATATACGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAACCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGcc                                                                                 <  5:405794/139‑1 (MQ=255)
                                                       cTATTCCTCTGTCTTGGAGTTTCATATAATACATATACGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGcc                                                                                 <  7:12521/139‑1 (MQ=255)
                                                            tctcTTTCTTGGAGTTTCATATAATACATATACGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTTGAAGATATCGCCCGCt                                                                             <  8:26652/138‑1 (MQ=255)
                                                            tctcTGTCTTGGAGTTTCATATAATACATATACGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGccc                                                                                <  4:212316/135‑1 (MQ=255)
                                                                  tCTTGGAGTTTCATATAATACATATACGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTtata                                                                       >  7:372404/1‑138 (MQ=255)
                                                                     tGGAGTTTCATATAATACATATACGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGc                                                                                  >  4:101239/1‑124 (MQ=255)
                                                                     tGGAGTTTCATATAATACATATACGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGc                                                                                  <  3:101239/124‑1 (MQ=255)
                                                                      ggAGTTTCATATTATACATATACGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTtat                                                                        <  3:239484/133‑1 (MQ=255)
                                                                      ggAGTTTCATATAATACATATACGGAGAAGGATTGACTATCCTAAGCACACGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTATGAGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTc                                                                  >  6:95433/1‑139 (MQ=255)
                                                                            tCATATAATACATATACGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGAGAGAACGCCTTGGAAGATATCGcc                                                                                 <  7:37489/118‑1 (MQ=255)
                                                                            tCATATAATACATATACGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGcc                                                                                                >  7:291877/1‑103 (MQ=255)
                                                                            tCATATAATACATATACGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGcc                                                                                                <  8:291877/103‑1 (MQ=255)
                                                                            tCATATAATACATATACGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGcc                                                                                 >  8:37489/1‑118 (MQ=255)
                                                                            tCATATAATACATATACGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTAt                                                            >  1:422757/1‑139 (MQ=255)
                                                                               tataATACATATACGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTAt                                                            >  3:177351/1‑136 (MQ=255)
                                                                                    taCATATACGGCGAAGGATTGACGATCCTAAGCACTCGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTgg                                                                                            >  5:1244/1‑99 (MQ=255)
                                                                                    taCATATACGGCGAAGGATTGACGATCCTAAGCACTCGGTATAACTCAAAAGCATCTGCTTTTATCGGCACCTCAAATTTTTGTGATAAAACACCCTgg                                                                                            <  6:1244/99‑1 (MQ=255)
                                                                                    taCATATACGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTa                                                    >  8:92677/1‑139 (MQ=255)
                                                                                       atatACGGAGAAGGATTGACTATCCTAAGCACCATGTATAACTCAAATGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGTTATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACAt                                                 <  5:95433/139‑1 (MQ=255)
                                                                                         ataCGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGccc                                                                                >  2:421999/1‑106 (MQ=255)
                                                                                         ataCGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGccc                                                                                <  1:421999/106‑1 (MQ=255)
                                                                                         ataCGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGcc                                                                                 <  2:26461/105‑1 (MQ=255)
                                                                                         ataCGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGcc                                                                                 >  1:26461/1‑105 (MQ=255)
                                                                                         ataCGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACAt                                                 >  7:83705/1‑137 (MQ=255)
                                                                                              gagaAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACTCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTAAATCATCCa                                           >  5:388106/1‑138 (MQ=255)
                                                                                              gagaAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCa                                           >  5:404446/1‑138 (MQ=255)
                                                                                               agaAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCAt                                          >  6:154966/1‑138 (MQ=255)
                                                                                                 aaGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTTTATATTATTTTATTTTTTCTAAATCAGCCATa                                         >  5:68068/1‑137 (MQ=255)
                                                                                                 aaGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTAtt                                                           <  1:191154/119‑1 (MQ=255)
                                                                                                 aaGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTAtt                                                           >  2:191154/1‑119 (MQ=255)
                                                                                                 aaGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCa                                           >  3:199300/1‑135 (MQ=255)
                                                                                                    gagtGACGATCCTTAGCACCCGTTATAACTCAAAGGCATCTGTTTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGc                                    <  7:57955/136‑1 (MQ=255)
                                                                                                         aCGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGtt                               >  5:204379/1‑139 (MQ=255)
                                                                                                         aCGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGtt                               >  2:332511/1‑139 (MQ=255)
                                                                                                            aTCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGTCTGGtt                               >  4:50218/1‑136 (MQ=255)
                                                                                                             tCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGTTTTTc                           <  2:172009/139‑1 (MQ=255)
                                                                                                              ccTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGTTTTTCa                          >  5:154765/1‑139 (MQ=255)
                                                                                                              ccTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGTTTTTCa                          >  2:419208/1‑139 (MQ=255)
                                                                                                              ccTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGTTTTTCa                          >  1:356615/1‑139 (MQ=255)
                                                                                                                  aGCACAAGGTATAACTCAAACGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGTTTTTCATaa                       <  8:372404/138‑1 (MQ=255)
                                                                                                                   gCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGTTTTTCATAAtt                     <  6:404446/139‑1 (MQ=255)
                                                                                                                         ggTATAACTCAAAGGCATCTGAGTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTATTTTATTTTTTCATCATCAGCCATAAAGTCTGGTATTTAATAATTag                   >  6:11269/1‑135 (MQ=255)
                                                                                                                          gTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGTTTTTCATAATTag                   >  3:141654/1‑134 (MQ=255)
                                                                                                                             taACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGTTTTTCATAATTAGAAGATAc            <  2:43025/138‑1 (MQ=255)
                                                                                                                              aaCTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGTTTTTCATAATTAGAAGATACTg          >  7:382628/1‑139 (MQ=255)
                                                                                                                                  cAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGTTTTTCATAATTAGAAGATACTGt         >  4:298971/1‑136 (MQ=255)
                                                                                                                                   aaaGGCATCTGATTTTCTCGGAATCTGATATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGTTTTTCATAATTAGAAGATACTGTCTCa     <  5:11269/139‑1 (MQ=255)
                                                                                                                                   aaaGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGTTTTTCATAATTAGAAGATACTGtctc      <  7:191166/138‑1 (MQ=255)
                                                                                                                                    aaGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGTTTTTCATAATTAGAAGATACTGTCTCa     >  2:41655/1‑138 (MQ=255)
                                                                                                                                     aGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCg                                                                               >  7:136051/1‑63 (MQ=255)
                                                                                                                                     aGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCg                                                                               <  8:136051/63‑1 (MQ=255)
                                                                                                                                     aGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGTTTTTCATaa                       >  7:78344/1‑119 (MQ=255)
                                                                                                                                     aGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGTTTTTCATaa                       <  8:78344/119‑1 (MQ=255)
                                                                                                                                     aGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGTTTTTCATAATTAGAAGATAc            <  7:47446/130‑1 (MQ=255)
                                                                                                                                     aGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGTTTTTCATAATTAGAAGATAc            >  8:47446/1‑130 (MQ=255)
                                                                                                                                     aGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGTTTTTCATAATTAGAAGATACTGTCTCa     >  1:55468/1‑137 (MQ=255)
                                                                                                                                     aGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGTTTTTCATAATTAGAAGATACTGTCTCa     >  1:391904/1‑137 (MQ=255)
                                                                                                                                     aGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGTTTTTCATAATTAGAAGATACTGTCTCa     >  6:398478/1‑137 (MQ=255)
                                                                                                                                     aGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGTTTTTCATAATTAGAAGATACTGTCTCa     >  5:19532/1‑137 (MQ=255)
                                                                                                                                     aGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGTTTTTCATAATTAGAAGATACTGTCTCa     >  1:146102/1‑137 (MQ=255)
                                                                                                                                     aGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGACTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTATACATAAGCCATAAAGGCTGGTTTTTAATAATTAAAAGATACAGTcaca     >  5:49071/1‑137 (MQ=255)
                                                                                                                                      ggCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGTTTTTCATAATTAGAAGATACTGTCTCAAAg  <  6:19532/139‑1 (MQ=255)
                                                                                                                                      |                                                                                                                                          
TGGATTTCCAAGTGCCCGTCCTTAACGTGGATTAATCGTTCCGGAGAGCTGCCGACTATTTCTCTGTCTTGGAGTTTCATATAATACATATACGGAGAAGGATTGACGATCCTAAGCACCCGGTATAACTCAAAGGCATCTGATTTTATCGGAATCTCAAATTTTTGTGACAGAACGCCTTGGAAGATATCGCCCGCTTTTATATATTCTTTTATTTTTTCTACATCAGCCATAAAGGCTGGTTTTTCATAATTAGAAGATACTGTCTCAAAG  >  CP006881/2194347‑2194619

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: