| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 3,444,703 | A→C | 16.1% | V43G (GTC→GGC) | U712_17685 ← | UPF0750 membrane protein yvjA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 3,444,703 | 0 | A | C | 16.1% | 157.5 / 8.4 | 103 | V43G (GTC→GGC) | U712_17685 | UPF0750 membrane protein yvjA |
| Reads supporting (aligned to +/- strand): ref base A (66/19); new base C (5/13); total (71/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.13e-05 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 104 total aligned reads displayed.
AGCGTCTTTAGTCCAAATTTCCCGCCGAGCAAAATGACGCCAGCAATAAATAAAGGGATATTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCCATCATATATCCTCCGT > CP006881/3444577‑3444841 | aGCGTCTTTAGTCCAAATTTCCCGCCGAGCAAAATGACGCCAGCAATAAATAAAGGGATATTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCcggcgg < 1:356223/139‑1 (MQ=255)aGCGTCTTTAGTCCAAATTTCCCGCCGAGCAAAATGACGCCAGCAATAAATAAAGGGATATTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCcgg < 4:315732/136‑1 (MQ=255) cGTCTTTAGTCCATAATACCCGCCGCGCAAAATGACGCCAGCAATAAATAAAGGGATATTAATAATCCACTGTACATACGCTGCATCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCggcggc > 8:247149/1‑138 (MQ=255) tttAGTCCAAATTTCCCGCCGCGCAAAATGACGCCAGCAATAAATAAAGGGATATTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATca > 2:197074/1‑138 (MQ=255) aGTCCAAATTTCCCGCCGAGCAAAATGACGCCAGCAATAAATAAAGGGATATTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCt > 3:202071/1‑136 (MQ=255) tCCAAATTTCCCGCCGAGCAAAATGACGCCAGCAATAAATAAAGGGATATTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTc > 1:68905/1‑139 (MQ=255) aTTTCCCGCCGAGCAAAATGACGCCAGCAATAAATAAAGGGATATTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAg > 6:361651/1‑139 (MQ=255) ccgccgAGCAAAATGACGCCAGCAATAAATAAAGGGATATTAATAATCCACTGTACATACGCTGCTTCAAACCCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCaaa > 7:379978/1‑138 (MQ=255) ccgccgAGCAAAATGACGCCAGCAATAAATAAAGGGATATTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCccgc > 6:86332/1‑112 (MQ=255) ccgccgAGCAAAATGACGCCAGCAATAAATAAAGGGATATTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCccgc < 5:86332/112‑1 (MQ=255) ccgccgAGCAAAATGACGCCAGCAATAAATAAAGGGATATTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCaaaa < 8:174409/139‑1 (MQ=255) ccgccgAGCAAAATGACGCCAGCAATAAATAAAGGGATATTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCaaaa < 6:27583/139‑1 (MQ=255) ccgccgAGCAAAATGACGCCAGCAATAAATAAAGGGATATTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCaaa > 7:25720/1‑138 (MQ=255) ccgccgAGCAAAATGACGCCAGCAATAAATAAAGGGATATTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCaaa > 1:395538/1‑138 (MQ=255) ccgccgAGCAAAATGACGCCAGCAATAAATAAAGGGATATTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGAACCCTCTGACCCCGCCGGCGCCAATCTTATTAGGAAGCaaa > 1:132417/1‑138 (MQ=255) cgccgcCCAAAATGACGCCAGCAATAAATAAAGGGATATTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCaaaaa < 7:85078/139‑1 (MQ=255) cgccgATCAAAATGACGCCAGCAATAAATAAAGGGATATTAATAATCCACTGTACATACGCTTATTCAAAACCATATGATTGTAAAATCTTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCaaaaa < 7:79022/139‑1 (MQ=255) cGCCAGCAATAAATAAAGGGATATTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGa > 5:184183/1‑116 (MQ=255) cGCCAGCAATAAATAAAGGGATATTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGa < 6:184183/116‑1 (MQ=255) aaaGGGATATTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCgctg > 2:225733/1‑139 (MQ=255) aGGGATATTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCgctgct > 7:138947/1‑139 (MQ=255) aGGGATATTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCgctgct > 6:71960/1‑139 (MQ=255) ggcaaatTAATAATCCACTGTACATACGCTGCTACAAAACAATATGATTGAAAAATCGTACTGACCCCGCTGACCCCGCCGGCGGAAATCTTATTCGGAAGAAAAAAAACATAAAAGCACACGGCCGTAATCGCTGCTc < 7:15506/134‑1 (MQ=255) tatTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGCCACCGCCGGCGGCACTCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAAACGCGGCTCCTAt > 5:353799/1‑139 (MQ=255) tatTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTAt > 8:310884/1‑139 (MQ=255) atTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTAt > 5:221221/1‑138 (MQ=255) aaaaaatCCACTGAACATCCGCTGATTCAAAACCATATTTTTTAAAAATCTTACTGACCCCGCTCCCCCCGCCGGCGGAAATCTTATTCGCAACAAAAAATACATAAACCCACACGGCCGTAATCGCTGCTCCTAt < 4:99729/132‑1 (MQ=255) aaaaaatCCACTCTACATACGCTCCTAAAAAACCATATGTTTGAAAACTCGTAGTCCCCCCGCTGCCCCCGCCGGCGCCAATATTTTTCCTAACAAAAAAAACAAAACAGCCCACGGCCGTAATCGCTGCTCCTAt < 4:411218/132‑1 (MQ=255) ataatCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGAAATCGCTGCTCCTATc > 4:111026/1‑135 (MQ=255) atCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATg > 7:7484/1‑138 (MQ=255) atCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGt > 2:121438/1‑139 (MQ=255) acccACTGAAAATAGGCTGCTTCAAAACCTTATGATTTAAAATTCGTAGTGAGCCGGCTGCCCCCGCCGGGGGAAATCTTTTTCGTACCCAAAAATACATAAATGGCCACGGCCGTAATCGCTGCTCCTATCAata < 4:197362/134‑1 (MQ=255) tCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGta > 1:108654/1‑139 (MQ=255) tCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTAGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGATCCTATCAATATTta > 2:199931/1‑139 (MQ=255) aCTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGta > 4:76485/1‑136 (MQ=255) aCTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCCCTGACCCCGCCGGCGCCAATCTTATTCGGAAGCAAAAATACATAAAAGGACACGGCCGTAATCCCTGCTCCTATaaaaaagaa > 3:95586/1‑130 (MQ=255) tGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACa > 1:201799/1‑138 (MQ=255) tGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACa > 2:73734/1‑138 (MQ=255) tGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCCCTGCTACTATCAAAATGTATACa > 5:127801/1‑138 (MQ=255) tACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATaa > 5:147289/1‑139 (MQ=255) aCATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACAt > 3:411218/1‑136 (MQ=255) aCATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCATATTCGGAAGCAAAAATACATTAAAGCACACGGCCGTAATCGCTGCTCCTATCAATAATTATACa > 3:276216/1‑135 (MQ=255) aCGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTATTCGCTGCTCCTATCAATATGTATACATAATCCCg > 6:232892/1‑139 (MQ=255) aCGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCg > 2:253936/1‑139 (MQ=255) gctTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCaaaa > 5:6887/1‑139 (MQ=255) gctTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCaaaa > 7:179875/1‑139 (MQ=255) gctTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCaaaa > 6:397986/1‑139 (MQ=255) gctTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCaaa > 1:302919/1‑138 (MQ=255) gctTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCaaa > 7:265011/1‑138 (MQ=255) gctTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCaaa > 7:332346/1‑138 (MQ=255) gctTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCaaa > 1:364053/1‑138 (MQ=255) gctTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCaaa > 1:392847/1‑138 (MQ=255) gctTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCaaa > 1:194775/1‑138 (MQ=255) gctTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCaaa > 7:381983/1‑138 (MQ=255) gctTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAACCCCGCaaa > 8:161456/1‑138 (MQ=255) gctTCAAAACCATATGATAGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGTACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCaaa > 7:305824/1‑138 (MQ=255) gctTCAAAACCATATGATAGTAAAATCGTACTGATCCCGCTGACCCCGCCGCCTGCAAACATATTCGGAAGCAAAAATACATTAAAAGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATACAGCaaa > 7:364523/1‑138 (MQ=255) ctTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATATTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATACCTCa > 4:276170/1‑135 (MQ=255) attaaaaaCAATATTATTTAAAAATCGTACTCACCCCCCTGCCCCGGCCGGCGTAAATATTATTCTCAACAAAAAATAAATTAACGCCCACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCaaa < 1:186388/133‑1 (MQ=255) aaaaaaaCAATATTATTGAAACATCGTACTCATCCCCCGGACCCCGCGCGCGTAAATCTTAATCCCAACAAAAAATACATAAACGCCCACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATc < 5:95618/136‑1 (MQ=255) tCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCCATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCaaa > 3:259203/1‑135 (MQ=255) tCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCaaaa > 3:174265/1‑136 (MQ=255) tCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCaaaa > 3:386878/1‑136 (MQ=255) tCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCaaaa > 3:79290/1‑136 (MQ=255) tCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCaaa > 3:140210/1‑135 (MQ=255) tCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTAATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATTTATACATAATCCCGCaaa > 3:47088/1‑135 (MQ=255) tCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCAGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATAAATAATCACGCaaa > 4:259729/1‑135 (MQ=255) tCAAAACCATATGATTGTAAAATCGTACTGATCCAGCTGCCCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATAAAAGGACACGGCCGAAATCGCTCCTCCTATCAATATGTATACATAATCCCGCaaa > 4:96911/1‑135 (MQ=255) acaCCATATGATTTAAAAATCGTACTGACCCCGCTGACCCCGCCGGCGGAAATCTTATTCGCAACAAAAAATAAATTAACGCCCACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCcaca < 2:34516/137‑1 (MQ=255) aaaCCATATTATTTTAAAATCGTACTGATCCCGCTGCCCCCGCCGGGGTCATTCTTATTCGGAACAAAAAAAACAAAAAAGCACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCcaca < 8:10003/139‑1 (MQ=255) aaaCCATATCATTCTAAACTCGAACGTACCCCGCCCACCCCGCGGGCGCCAATATAATTCGCAACAAAAAAAAAATAACCGCCCACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCcaca < 1:121438/139‑1 (MQ=255) aaaCAATTTTATTGTAAACTGGCACTCCCCCCGCGCCCCCCGCCGGCGGAAATTTTTTTCTCAAAAAAAAATAAATTAACGCCCACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATcc < 4:259203/136‑1 (MQ=255) aaaCAATTTGTTTTTAAACTCGTACGCACCCCGCGCCCCCCGCCGGCGCCAATCTTATTCGCAACAAAAAATAAATAAACGCCCACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCcaca < 8:25720/139‑1 (MQ=255) aaaCAATATGATTCTAAAATCTTACTGACCCCGCTGACCGGCCCGGCGTAAATTTTATTCTGAACAAAAAATACATACCCGCCCACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCcaca < 6:207671/139‑1 (MQ=255) atatGATTGTAAAATCGTACTGCTCCCGCTGCCCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGtt > 6:163614/1‑139 (MQ=255) tatGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGTCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGttt > 7:237636/1‑139 (MQ=255) tatGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGttt > 6:394963/1‑139 (MQ=255) tatGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGttt > 6:359260/1‑139 (MQ=255) tatGAGTGTAAAATCGTACTGATACCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAATGACAAGGCCGTAGTCGCGGCTCCTAACAATATGTATACATAATCCCGCAAAATCCACAATGttt > 8:392312/1‑139 (MQ=255) gTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTcct > 1:34516/1‑138 (MQ=255) tAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCg > 7:349113/1‑138 (MQ=255) aaaaCCGTACTGATCCCCCTGCCCCCGCCGGCCGCAATCTTATTCGGAACAAAAAATACATAAACGCACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGt < 7:148606/138‑1 (MQ=255) tCGAACTGCCCCCGCTCCCCCCGCGGGCGGAAATCTTATTCGCAACAAAAAATACAAAACCGCCCACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTc < 1:359011/139‑1 (MQ=255) cctACTCATCCCGCTGACCCCGCGGGCCGAAATCTTATTCGTAAGAAAAAATAAATTACCCCCCACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACg < 3:285429/134‑1 (MQ=255) cGTACTGAGCCCCCGCCCCCCGCCGCGGGAAATCTTATTCGCAACAAAAAATACAATCAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTcc < 1:15562/139‑1 (MQ=255) gTACTGAGCCCGCTGCCCCCGCCGGCGGCAATCTTATTCGCAAGAAAAAATACATTAACGCCCACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTcc < 1:225733/138‑1 (MQ=255) tACTGATCCCGCTGCCCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATACCGCAAAATCCAAAATGTTTTATTCCGTACGTccc > 8:158439/1‑137 (MQ=255) tACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCcat > 6:45726/1‑139 (MQ=255) ccccaccccGCTCCCCCCGCCGGCGCAAATATTAACCGCAACAAAAAATAAAATACCCCCCACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTcc < 2:194775/130‑1 (MQ=255) actttgcccGCTGACCCCGCCTGCGGAAATATTATTGGGAACCAAAAATACATAAAAGCACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCcat < 8:265011/132‑1 (MQ=255) cccccGCTCACCCCGCCGGCGGAAATATTATTCGAAACAAAAAATACATAAACGCACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCcatca < 3:111026/134‑1 (MQ=255) aTCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATa > 2:218244/1‑46 (MQ=255) aTCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATa < 1:218244/46‑1 (MQ=255) aTCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCAATCAATAATTATACATAATCCCGCAAAATCCACAATGATTTATTCAGTACGTACATCata > 1:202275/1‑138 (MQ=255) cccGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCCATCatatat > 5:404679/1‑139 (MQ=255) ccGGTGACCCCGCCGGCGTCAATATTATTCGCAAGAAAAAATAAATTAAAGCACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCCATCatat < 4:174265/136‑1 (MQ=255) gCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCCATCATATAtcct > 6:130899/1‑139 (MQ=255) gCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTAACAATATGTTTACATAATACCGCAAAATCCACAATGTTTTATTCCGTACGTCcatcatctg > 3:348593/1‑132 (MQ=255) gACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCCATCATATAtcct > 4:246185/1‑136 (MQ=255) aCCCCGCCGGCGGCAATCTTATTCGCAACAAAAAATACATAACTGCACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCCATCATATATCCTCCGt < 6:200232/139‑1 (MQ=255) | AGCGTCTTTAGTCCAAATTTCCCGCCGAGCAAAATGACGCCAGCAATAAATAAAGGGATATTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGGAAGCAAAAATACATTAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCCATCATATATCCTCCGT > CP006881/3444577‑3444841 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |