Predicted mutation
evidence seq id position mutation annotation gene description
RA CP006881 3,579,791 (A)7→6 coding (79/132 nt) U712_18380 → Hypothetical Protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068813,579,7850A.100.0% 443.8 / NA 97coding (73/132 nt)U712_18380Hypothetical Protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base . (60/37);  total (60/37)

Only 100 of 106 total aligned reads displayed.

GAAGCAAGCATACAATAGACATCTCTAGTAGAGGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGCAAAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCAGTCAAAAATTCAACAAAACTCCGCATCGCAAAAGGCTCTTCCTTTATTT  >  CP006881/3579649‑3579920
                                                                                                                                         |                                                                                                                                       
gAAGCAAGCATACAATAGACATCTCTAGTAGAGGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAACCCGCACTTTTTATTTCGGGTGTCTGCATGCaa                                                                                                                                        >  1:217437/1‑138 (MQ=255)
      agcaTACAATAGACATCTCTAGTAGAGGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGCaaaaaacac                                                                                                                                 >  4:430386/1‑136 (MQ=255)
      agcaTACAATAGACATCTCTAGTAGAGGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGCaaaaaaca                                                                                                                                  >  3:341060/1‑136 (MQ=255)
       gcaTACAATAGACATCTCTAGTAGAGGAAATCAACAAAGCAACGCTGATACCCACAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAAACCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGCaaaaaacaca                                                                                                                                <  2:1494/139‑5 (MQ=255)
             aaTAGACATCTCTAGTAGAGGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGa                                                                                                                         <  2:478417/139‑1 (MQ=255)
               tAGACATCTCTAGTAGAGGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATc                                                                                                                       >  8:139589/1‑139 (MQ=255)
                  aCATCTCTAGTAGAGGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGTATGAAGTCGGAATCAATCCTAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTc                                                                                                                    >  8:445950/1‑139 (MQ=255)
                  aCATCTCTAGTAGAGGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTc                                                                                                                    >  3:66600/1‑139 (MQ=255)
                  aCATCTCTAGTAGAGGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTc                                                                                                                    >  2:294279/1‑139 (MQ=255)
                  aCATCTCTAGTAGAGGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTc                                                                                                                    >  6:366913/1‑139 (MQ=255)
                    aTCTCTAGTAGAGGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTg                                                                                                                  >  6:147764/1‑139 (MQ=255)
                    aTCTCTAGTAGAGGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTg                                                                                                                  >  1:13257/1‑139 (MQ=255)
                    aTCTCTAGTAGAGGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTg                                                                                                                  >  3:96689/1‑139 (MQ=255)
                    aTCTCTAGTAGAGGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTg                                                                                                                  >  3:346470/1‑139 (MQ=255)
                     tctcTAGTAGAGGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTg                                                                                                                  >  2:260116/1‑138 (MQ=255)
                       tctAGTAGAGGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCgg                                                                                                                          <  7:406937/128‑1 (MQ=255)
                       tctAGTAGAGGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCgg                                                                                                                          >  8:406937/1‑128 (MQ=255)
                       tctAGTAGAGGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGa                                                                                                                >  1:125784/1‑138 (MQ=255)
                       tctAGTAGAGGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGa                                                                                                                >  7:111668/1‑138 (MQ=255)
                       tctAGTAGAGGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGa                                                                                                                >  1:302567/1‑138 (MQ=255)
                       tctAGTAGAGGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGa                                                                                                                >  6:127941/1‑138 (MQ=255)
                         tagtagAGGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCTGAATCAATCCGAAACCGCACTTTTAATTTCGGGTGTCTGCATGC‑AAAAAGCACACCCGGATCGTCTGGaaaa                                                                                                             >  4:118653/1‑139 (MQ=255)
                         tagtagAGGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTgg                                                                                                                 <  1:40600/135‑1 (MQ=255)
                         tagtagAGGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTgg                                                                                                                 <  8:205611/135‑1 (MQ=255)
                         tagtagAGGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGaaaa                                                                                                             >  5:467696/1‑139 (MQ=255)
                         tagtagAGGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGaa                                                                                                               <  3:473879/137‑1 (MQ=255)
                           ttatagGAAATCAACAAAGCCACGCCGTTACCCATAAAATAAAATCAAAAAAAACGCAT‑TATTAGGAAACAATCCGAAACCGGAATTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAAt                                                                                                            <  7:472198/134‑1 (MQ=255)
                           gtagAGGAAATCAACAAATCAACGCTGTTACACAGAAATGAATATC‑AAAAAAACGGATGAAGTCGTAATCATTCCGAAACCTCACTTTTTATTTCGTTTTTCTGCATGC‑AAAAAAGACACCCTGATCGTCTGGAAAAt                                                                                                            <  6:239549/138‑1 (MQ=255)
                           gtagAGGAAATCAACAAAGCTACGCTGTTACCCAGAATTGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGaa                                                                                                               <  1:3553/135‑1 (MQ=255)
                           gtagAGGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAAtc                                                                                                           >  7:329690/1‑139 (MQ=255)
                              gagGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAAtctc                                                                                                         >  1:235143/1‑138 (MQ=255)
                              gagGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAAtctc                                                                                                         >  5:445321/1‑138 (MQ=255)
                              gagGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAAtctc                                                                                                         >  5:141265/1‑138 (MQ=255)
                                ggAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTcaac                                                                                                      <  1:73602/139‑1 (MQ=255)
                                 gAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATTTC‑AAAAGACCGGATGAAGTCGGAATCAATCCGTAACCGCACTTGTTATTTCGGGTGTCTGCATGC‑ATAAAACACACCCGGATCGTCTGGAAAATCTccac                                                                                                      >  6:226005/1‑138 (MQ=255)
                                 gAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGCAAATCTcaac                                                                                                      >  2:349283/1‑138 (MQ=255)
                                 gAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAAt                                                                                                            <  6:26631/132‑1 (MQ=255)
                                 gAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAAt                                                                                                            >  5:26631/1‑132 (MQ=255)
                                 gAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTcaaca                                                                                                     >  2:106642/1‑139 (MQ=255)
                                 gAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTcaac                                                                                                      >  4:362545/1‑138 (MQ=255)
                                 gAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTcaac                                                                                                      >  1:212181/1‑138 (MQ=255)
                                 gAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTcaac                                                                                                      >  6:144741/1‑138 (MQ=255)
                                 gAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTcaac                                                                                                      >  6:15008/1‑138 (MQ=255)
                                 gAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGAACGACTGGAAAATCTaaac                                                                                                      >  7:95756/1‑138 (MQ=255)
                                 gAAATAAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAAAGGATGAAGTCGGAATCAATCAGAAACCGCACTTTTAATTTCGTGTGTATGCATGC‑AAAACACACACCCTTATCGTCAGGAAAATCTcaac                                                                                                      >  5:239549/1‑138 (MQ=255)
                                   attaaacaaAGCAACGCTGTTACCCAGAAATTAATATC‑AAAAAAACGGATGAAGTCGTAATCAATCCGAAACCGCACTTTTTATTTGGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTcaacaa                                                                                                    <  2:213385/134‑1 (MQ=255)
                                   aaTCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAAt                                                                                                   >  3:90117/1‑139 (MQ=255)
                                   aaTCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAAt                                                                                                   >  2:302648/1‑139 (MQ=255)
                                   aaTCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAAt                                                                                                   >  8:151514/1‑139 (MQ=255)
                                   aaTCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTATATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAAt                                                                                                   >  8:260173/1‑139 (MQ=255)
                                   aaTCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAAACCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTcaac                                                                                                      <  4:457000/136‑1 (MQ=255)
                                   aaTCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAAACCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTcaac                                                                                                      >  3:457000/1‑136 (MQ=255)
                                    aTCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCTATCCGAAACCGCACTTTTTATTTCGGTTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATc                                                                                                  <  6:434635/139‑1 (MQ=255)
                                        acaaAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCggg                                                                                              <  1:260116/139‑1 (MQ=255)
                                          aaaGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTg                                                                                            <  7:8824/139‑1 (MQ=255)
                                            aGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCa                                                                                          <  2:212181/139‑1 (MQ=255)
                                            aGCAACGCTGTTACACAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTg                                                                                            >  3:52853/1‑137 (MQ=255)
                                                actcTGTTACCCAGAAATGAATATC‑AAAAAAACGGAAGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTATTCATTC‑AAAAAACACAACCGGATCGTCTGGAAAATATCAACGATCCGGGTGCAGAtc                                                                                      <  7:136911/136‑1 (MQ=255)
                                                aCGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAAGCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGAtc                                                                                      <  1:345304/139‑1 (MQ=255)
                                                      ttACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCTGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGACTGCATGC‑AAAAAACACACCCGGATCGTCTTGAAAATCTCAACGATCCGGGTGCAGATctgctt                                                                                 >  8:136911/1‑138 (MQ=255)
                                                      ttACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATcttctt                                                                                 <  7:139589/138‑1 (MQ=255)
                                                      ttACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATcttctt                                                                                 >  6:51659/1‑138 (MQ=255)
                                                             gAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACAt                                                                         >  8:245213/1‑139 (MQ=255)
                                                              aaaTGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGCaaaaaa                                                                                                                                    >  2:389401/1‑80 (MQ=255)
                                                              aaaTGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGCaaaaaa                                                                                                                                    <  1:389401/80‑1 (MQ=255)
                                                              aaaTGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑‑AAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACAttt                                                                       >  8:365786/1‑139 (MQ=255)
                                                                   aaTATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACAttttttt                                                                   >  1:282792/1‑139 (MQ=255)
                                                                     tatC‑AAAAAAACGGATGAAGTAGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AATAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGc                                                                 <  6:419690/139‑1 (MQ=255)
                                                                       tC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCgt                                                               <  4:341060/139‑1 (MQ=255)
                                                                           aaaaaaCGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCgtctg                                                            >  8:239918/1‑139 (MQ=255)
                                                                                    aTGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCa                                                   <  6:141265/139‑1 (MQ=255)
                                                                                         gTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCAGTCaa                                              <  8:15779/139‑1 (MQ=255)
                                                                                              aatcaatcCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAACCACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCAGTCAAAAAtt                                         <  5:335648/139‑1 (MQ=255)
                                                                                              aatcaatcCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTAAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCAGTCAAAAAt                                          >  7:166281/1‑138 (MQ=255)
                                                                                                   atcCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCAGTCAAAAATTcaaca                                    <  6:467696/139‑1 (MQ=255)
                                                                                                   atcCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCAGTCAAAAATTcaac                                     >  5:356609/1‑138 (MQ=255)
                                                                                                   atcCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCAGTCAAAAATTcaac                                     >  6:473319/1‑138 (MQ=255)
                                                                                                    tcCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCAGTCAAAAATTcaaca                                    >  8:370371/1‑138 (MQ=255)
                                                                                                        aaaCCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTTGTACATTTTTTTGCGTCTGTCTTCCTGAGTCAAAAATTCAACACAACt                               >  2:326497/1‑139 (MQ=255)
                                                                                                        aaaCCGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCAGTCAAAAATTCAACAAAACt                               >  6:422046/1‑139 (MQ=255)
                                                                                                           ccGCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCAGTCAAAAATTCAACAAAACTCCg                            <  3:430386/139‑1 (MQ=255)
                                                                                                             gCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCAGTCAAAAATTCAACAAAACTCCGCa                          <  5:144741/139‑1 (MQ=255)
                                                                                                             gCACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCAGTCAAAAATTCAACAAAACTCCGCa                          <  5:434902/139‑1 (MQ=255)
                                                                                                             gCACTTTTTATTTCGGGGGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCAGTCAAAAATTCAACAAAACTCCGCa                          <  1:326497/139‑1 (MQ=255)
                                                                                                              cACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCAGTCAAAAATTCAACAAAACTCCGCAt                         >  2:72512/1‑139 (MQ=255)
                                                                                                              cACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCAGTCAAAAATTCAACAAAACTCCGCAt                         >  8:135230/1‑139 (MQ=255)
                                                                                                              cACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCAGTCAAAAATTCAACAAAACTCCGCAt                         >  1:327252/1‑139 (MQ=255)
                                                                                                              cACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCAGTCAAAAATTCAACAAAACTCCGCAt                         >  6:221495/1‑139 (MQ=255)
                                                                                                              cACTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCAGTCAAAAATTCAACAAAACTCCGCAt                         >  6:225334/1‑139 (MQ=255)
                                                                                                               aCTTTTTATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCAGTCAAAAATTCAACAAAACTCCGCa                          <  8:142106/137‑1 (MQ=255)
                                                                                                                   tttATTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCAGTCAAAAATTCAACAAAACTCCGCATCGCa                     >  7:25936/1‑138 (MQ=255)
                                                                                                                      aTTTCGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAAACTCAACAAACCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCAGTCAAAAATTCAACACAACTCCGCATAGCAAAAg                 >  4:110445/1‑139 (MQ=255)
                                                                                                                         tCGGGTGGCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCAGTCAAAAATTCAACAAAACTCCGCATCGCAAAAGGc               <  7:444745/138‑1 (MQ=255)
                                                                                                                          cGGGTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGCCTTCCTCAGTCAAAAATTCAACAAAACTCCGCATCGCAAAAGGctc             >  1:131433/1‑139 (MQ=255)
                                                                                                                           gggTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCAGTCAAAAATTCAACAAAACTCCGCATCGCAAAAGGctct            <  1:302648/139‑1 (MQ=255)
                                                                                                                           gggTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCAGTCAAAAATTCAACAAAACTCCGCATCGCAAAAGGctct            <  4:52853/139‑1 (MQ=255)
                                                                                                                           gggTGTCTGCATGC‑AAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCAGTCAAAAATTCAACAAAACTCCGCATCGCAAAAGGctc             <  1:72512/138‑1 (MQ=255)
                                                                                                                              gggcTGCATGC‑AAAAAACACACCCGGAGCGTCTGGAAACTCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCAGTCAAAAATTCACCAAAACTCCGCATCGCAAAAGGCTCTTcc         <  6:107806/136‑1 (MQ=255)
                                                                                                                                    catgc‑aAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCAGTCAAAAATTCAACAAAACTCCGCATCGCAAAAGGCTCTTCCTTTAt    <  3:362545/138‑1 (MQ=255)
                                                                                                                                      tgcaAAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCAGTCAAAAATTCAACAAAACTCCGCATCGCAAAAGGCTCTTCCTTTAttt  >  1:166000/1‑139 (MQ=255)
                                                                                                                                         |                                                                                                                                       
GAAGCAAGCATACAATAGACATCTCTAGTAGAGGAAATCAACAAAGCAACGCTGTTACCCAGAAATGAATATC‑AAAAAAACGGATGAAGTCGGAATCAATCCGAAACCGCACTTTTTATTTCGGGTGTCTGCATGCAAAAAAACACACCCGGATCGTCTGGAAAATCTCAACAATCCGGGTGCAGATCTTCTTTAATACATTTTTTTGCGTCTGTCTTCCTCAGTCAAAAATTCAACAAAACTCCGCATCGCAAAAGGCTCTTCCTTTATTT  >  CP006881/3579649‑3579920

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑