BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	3,723,091	A→T	intergenic (‑205/‑96)	U712_19190 ← / → U712_19195	PTS system sucrose‑specific EIIBC component/putative transporter ywcJ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	3,723,091	0	A	T	100.0%	460.5 / NA	130	intergenic (‑205/‑96)	U712_19190/U712_19195	PTS system sucrose‑specific EIIBC component/putative transporter ywcJ
Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (46/84); total (46/84)

Only 100 of 130 total aligned reads displayed.

TTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTGAGAATACGCTTTCATCATAAATTATGATAGCGTTTTCGTCAAC‑T‑GT‑TTT‑TTAGTTAAATAGTTTGATAAAACTTTTAGACAAAAATTCGTAAAAACTATTTGTGAAAAACTTCACAATATCGTGCTATACTATGCTCAACCATCAAAGAAAGCAGGAAAAAACAATGGAAACTCAAGCATTGCAAAAAGTTG  >  CP006881/3722959‑3723214

      ttACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGa                                                                                                                   >  4:3494/1‑138 (MQ=255)

       tACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGAc                                                                                                                  >  6:197614/1‑138 (MQ=255)

              aTTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATAAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATATTTTTATATAACATGTATACAAAAATTc                                                                                                          >  8:236478/1‑139 (MQ=255)

                        ttGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTaaaaatt                                                                                                 >  7:217602/1‑136 (MQ=255)

                         tGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTaa                                                                                               >  5:338046/1‑138 (MQ=255)

                          gCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTaat                                                                                              >  7:77310/1‑137 (MQ=255)

                          gCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTaa                                                                                               <  4:204070/138‑2 (MQ=255)

                          gCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTaa                                                                                               <  1:272625/138‑2 (MQ=255)

                          gCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTaa                                                                                               <  3:3494/138‑2 (MQ=255)

                          gCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTaa                                                                                               <  1:375311/138‑2 (MQ=255)

                               cTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGa                                                                                         <  5:453825/139‑1 (MQ=255)

                               cTTTACCAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATAATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAATTAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATtgtg                                                                                          >  4:321622/1‑138 (MQ=255)

                                    ccAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGaaata                                                                                     <  1:270008/138‑3 (MQ=255)

                                    ccAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGaaata                                                                                     <  4:80249/138‑3 (MQ=255)

                                    ccAGTCACAATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATCTAGACAAAAATTCGTAAAAATTAATTGTGaaata                                                                                     <  3:191596/138‑3 (MQ=255)

                                    ccAGTCACAATCACGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGaaata                                                                                     <  2:248255/138‑3 (MQ=255)

                                         tacaATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGaaata                                                                                     <  8:310329/132‑3 (MQ=255)

                                         tacaATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGaaata                                                                                     >  7:310329/2‑131 (MQ=255)

                                         cacaATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACGA‑TT‑TTT‑TTATTTAAATAGTTTGATTTAACATTTAGACAAAAATTCGTAAAAATTAAATGTGAAATACTTca                                                                                >  2:202090/1‑138 (MQ=255)

                                         cacaATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTca                                                                                >  1:346030/1‑138 (MQ=255)

                                         cacaATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGAGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACttaa                                                                                >  3:465279/1‑136 (MQ=255)

                                          acaATCACGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTcaca                                                                              <  2:474710/139‑1 (MQ=255)

                                             atcactcTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                           <  4:465279/133‑1 (MQ=255)

                                             aTCCCTCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                           <  6:71431/139‑1 (MQ=255)

                                             aTCCCTCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGATAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                           <  2:73598/139‑1 (MQ=255)

                                             aTCCCGCTTCTACAGAGTAAGAATACGCTTTCATCATACCTCATGATAGCGTTTTCGTCCAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATCACCTGTAGACAAAAATTCGGAAAAATTAATTGTGAAATACTTCACAata                                                                           <  4:307461/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATATATCATGATATCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                           <  1:320388/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                           >  5:221850/1‑139 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                           <  6:134122/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                           <  5:197614/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                           <  4:279600/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                           <  5:229385/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                           <  6:383187/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                           <  5:230098/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                           <  5:237867/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                           <  7:22065/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                           <  3:420366/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                           <  1:275471/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                           <  1:90249/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                           <  2:1487/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                           <  8:164624/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                           <  2:24497/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                           <  8:111770/139‑1 (MQ=255)

                                             aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                           <  3:174471/139‑1 (MQ=255)

                                             aTCCCGCTTATTAAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                           <  8:14824/139‑1 (MQ=255)

                                             aTCACGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                           <  6:218473/139‑1 (MQ=255)

                                               cccGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATc                                                                         >  2:169465/1‑139 (MQ=255)

                                               cccGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATc                                                                         <  8:198201/139‑1 (MQ=255)

                                                ccGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATc                                                                         <  8:217602/138‑1 (MQ=255)

                                                ccGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCg                                                                        <  7:169915/139‑1 (MQ=255)

                                                ccGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGACAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATc                                                                         <  8:53177/138‑1 (MQ=255)

                                                  gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                      <  8:76623/139‑1 (MQ=255)

                                                  gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                      <  6:252084/139‑1 (MQ=255)

                                                  gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                      >  6:422690/1‑139 (MQ=255)

                                                  gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                      <  8:412783/139‑1 (MQ=255)

                                                  gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                      <  1:169465/139‑1 (MQ=255)

                                                  gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                      <  1:202090/139‑1 (MQ=255)

                                                  gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                      <  1:67613/139‑1 (MQ=255)

                                                  gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                      <  3:187233/139‑1 (MQ=255)

                                                  gCTTATTCAGATTAAGAATACCCATTCAACATAAATCATGATAGCGATTTCGTCTAC‑T‑ATGTAT‑TTAGATAAATACTTTCAAATAACCTGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACATCTCAATATCGTg                                                                      <  7:352667/139‑1 (MQ=255)

                                                  gCTTATTCAGATTAAGAATAAGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                      <  2:205964/139‑1 (MQ=255)

                                                  gCTTACTCAGATTAAGAATACTCATTCATCATAACTCATGATAGCGTTTTCGTCAAC‑TAAT‑TAT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                      <  2:485904/139‑1 (MQ=255)

                                                   cTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                           <  5:357607/133‑1 (MQ=255)

                                                   cTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                           >  6:357607/1‑133 (MQ=255)

                                                       ttCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCtata                                                                 <  3:3177/139‑1 (MQ=255)

                                                            aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACTATATCGTGCt                                                                    <  7:289188/131‑1 (MQ=255)

                                                            aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                      <  7:123648/129‑1 (MQ=255)

                                                            aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                      >  8:123648/1‑129 (MQ=255)

                                                            aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATg                                                            >  3:263383/1‑139 (MQ=255)

                                                            aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATg                                                            >  6:310302/1‑139 (MQ=255)

                                                                agaATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCa                                                        <  4:263383/139‑1 (MQ=255)

                                                                 gaATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCaa                                                       >  7:346440/1‑139 (MQ=255)

                                                                    tACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCa                                                    <  8:346440/139‑1 (MQ=255)

                                                                      cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGaaata                                                                                     <  8:25485/104‑3 (MQ=255)

                                                                      cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGaaata                                                                                     >  7:25485/1‑102 (MQ=255)

                                                                      cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                           >  4:424698/1‑114 (MQ=255)

                                                                      cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                           >  6:393741/1‑114 (MQ=255)

                                                                      cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                           <  3:424698/114‑1 (MQ=255)

                                                                      cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCtata                                                                 >  6:446884/1‑124 (MQ=255)

                                                                      cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCtata                                                                 <  5:446884/124‑1 (MQ=255)

                                                                      cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCt                                                                    >  7:86207/1‑121 (MQ=255)

                                                                      cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCAt                                                   >  1:318644/1‑138 (MQ=255)

                                                                      cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCAt                                                   >  7:115974/1‑138 (MQ=255)

                                                                      cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCAt                                                   >  7:379154/1‑138 (MQ=255)

                                                                      cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCAt                                                   >  2:198960/1‑138 (MQ=255)

                                                                      cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TAAT‑TTT‑TTAGTTAAATAGTTAGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGATATACTATGCTCAATCAt                                                   >  1:339932/1‑138 (MQ=255)

                                                                      cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑T‑AT‑TTTCTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTcaca                                                                              >  6:203660/1‑111 (MQ=255)

                                                                      cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑T‑AT‑TTTCTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTcaca                                                                              <  5:203660/111‑1 (MQ=255)

                                                                            catcatAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGaaaga                                             >  7:384313/1‑138 (MQ=255)

                                                                              tcatAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGaaagaaag                                          <  5:422690/139‑1 (MQ=255)

                                                                                              cGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                           <  1:213121/90‑1 (MQ=255)

                                                                                               gTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATAATATGCTCAATCATGAAATAAAGCAGGAAAAGACAATGGa                         <  4:209723/139‑1 (MQ=255)

                                                                                                                   t‑ttAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACaaa        <  2:318644/138‑1 (MQ=255)

                                                                                                                   t‑ttAGTTAAATAGTTAGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACaaa        <  1:333073/138‑1 (MQ=255)

                                                                                                                       aGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACaaaagg     <  1:198960/138‑3 (MQ=255)

                                                                                                                        gTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGTAAACTCATGCATTACAAAAGGtt   >  4:454354/1‑139 (MQ=255)

                                                                                                                        gTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGtt   <  3:52713/139‑1 (MQ=255)

                                                                                                                        gTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGtt   <  8:343430/139‑1 (MQ=255)

                                                                                                                        gTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGtt   <  5:310302/139‑1 (MQ=255)

                                                                                                                          tAAATAGTTTGATATAACATGTAGACATAAATTCGTAAAAATTTATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAATAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTg  <  2:339932/138‑1 (MQ=255)

TTTCATTTACGCAAATTTTAGGTCTTGCCTGCTTTACCAGTCACAATCCCGCTTATTCAGATTGAGAATACGCTTTCATCATAAATTATGATAGCGTTTTCGTCAAC‑T‑GT‑TTT‑TTAGTTAAATAGTTTGATAAAACTTTTAGACAAAAATTCGTAAAAACTATTTGTGAAAAACTTCACAATATCGTGCTATACTATGCTCAACCATCAAAGAAAGCAGGAAAAAACAATGGAAACTCAAGCATTGCAAAAAGTTG  >  CP006881/3722959‑3723214

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`