Predicted mutation
evidence seq id position mutation annotation gene description
RA CP006881 3,723,130 A→T intergenic (‑244/‑57) U712_19190 ← / → U712_19195 PTS system sucrose‑specific EIIBC component/putative transporter ywcJ

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0068813,723,1300AT100.0% 427.8 / NA 114intergenic (‑244/‑57)U712_19190/U712_19195PTS system sucrose‑specific EIIBC component/putative transporter ywcJ
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (39/75);  total (39/75)

Only 100 of 117 total aligned reads displayed.

CACAATCCCGCTTATTCAGATTGAGAATACGCTTTCATCATAAATTATGATAGCGTTTTCGTCAAC‑T‑GT‑TTT‑TTAGTTAAATAGTTTGATAAAACTTTTAGACAAAAATTCGTAAAAACTATTTGTGAAAAACTTCACAATATCGTGCTATACTATGCTCAACCATCAAAGAAAGCAGGAAAAAACAATGGAAACTCAAGCATTGCAAAAAGTTGAACAGTACGCTTTGAACAAACTAAACATATTTGTTTCTAGCAAAATCCGT  >  CP006881/3723000‑3723264
                                                                                                                                      |                                                                                                                                      
cacaATCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAACGA‑TT‑TTT‑TTATTTAAATAGTTTGATTTAACATTTAGACAAAAATTCGTAAAAATTAAATGTGAAATACTTca                                                                                                                                  >  2:202090/1‑138 (MQ=255)
 acaATCACGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTcaca                                                                                                                                <  2:474710/139‑1 (MQ=255)
    atcactcTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             <  4:465279/133‑1 (MQ=255)
    aTCCCTCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             <  6:71431/139‑1 (MQ=255)
    aTCCCTCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGATAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             <  2:73598/139‑1 (MQ=255)
    aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCCTAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             <  6:37063/139‑1 (MQ=255)
    aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATATATCATGATATCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             <  1:320388/139‑1 (MQ=255)
    aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             <  3:174471/139‑1 (MQ=255)
    aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             <  6:383187/139‑1 (MQ=255)
    aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             <  2:24497/139‑1 (MQ=255)
    aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             <  6:221850/139‑1 (MQ=255)
    aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             <  6:134122/139‑1 (MQ=255)
    aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             <  4:277001/139‑1 (MQ=255)
    aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             <  5:230098/139‑1 (MQ=255)
    aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             <  5:229385/139‑1 (MQ=255)
    aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             >  5:221850/1‑139 (MQ=255)
    aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             <  3:420366/139‑1 (MQ=255)
    aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             <  5:197614/139‑1 (MQ=255)
    aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             <  4:480955/139‑1 (MQ=255)
    aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             <  4:279600/139‑1 (MQ=255)
    aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             <  1:275471/139‑1 (MQ=255)
    aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             <  2:1487/139‑1 (MQ=255)
    aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             <  1:90249/139‑1 (MQ=255)
    aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             <  1:7594/139‑1 (MQ=255)
    aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             <  8:186934/139‑1 (MQ=255)
    aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             <  8:111770/139‑1 (MQ=255)
    aTCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             <  8:164624/139‑1 (MQ=255)
    aTCACGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             <  6:218473/139‑1 (MQ=255)
     tCCCGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             >  7:412783/1‑138 (MQ=255)
      cccGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATc                                                                                                                           >  2:169465/1‑139 (MQ=255)
      cccGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATc                                                                                                                           <  8:198201/139‑1 (MQ=255)
       ccGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATc                                                                                                                           <  8:217602/138‑1 (MQ=255)
       ccGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCg                                                                                                                          <  7:169915/139‑1 (MQ=255)
       ccGCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGACAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATc                                                                                                                           <  8:53177/138‑1 (MQ=255)
         gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                                                                        <  6:252084/139‑1 (MQ=255)
         gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                                                                        >  6:422690/1‑139 (MQ=255)
         gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                                                                        <  8:412783/139‑1 (MQ=255)
         gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                                                                        <  1:169465/139‑1 (MQ=255)
         gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                                                                        <  8:76623/139‑1 (MQ=255)
         gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                                                                        <  1:67613/139‑1 (MQ=255)
         gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                                                                        <  1:202090/139‑1 (MQ=255)
         gCTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                                                                        <  3:422697/139‑1 (MQ=255)
         gCTTATTCAGATTAAGAATACCCATTCAACATAAATCATGATAGCGATTTCGTCTAC‑T‑ATGTAT‑TTAGATAAATACTTTCAAATAACCTGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACATCTCAATATCGTg                                                                                                                        <  7:352667/139‑1 (MQ=255)
         gCTTATTCAGATTAAGAATAAGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                                                                        <  2:205964/139‑1 (MQ=255)
         gCTTACTCAGATTAAGAATACTCATTCATCATAACTCATGATAGCGTTTTCGTCAAC‑TAAT‑TAT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                                                                        <  2:485904/139‑1 (MQ=255)
          cTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             >  6:357607/1‑133 (MQ=255)
          cTTATTCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             <  5:357607/133‑1 (MQ=255)
              ttCAGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCtata                                                                                                                   <  3:3177/139‑1 (MQ=255)
                 aGATTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACt                                                                                                                 <  7:236478/138‑1 (MQ=255)
                   aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACTATATCGTGCt                                                                                                                      >  8:289188/1‑131 (MQ=255)
                   aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACTATATCGTGCt                                                                                                                      <  7:289188/131‑1 (MQ=255)
                   aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                                                                        <  7:123648/129‑1 (MQ=255)
                   aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTg                                                                                                                        >  8:123648/1‑129 (MQ=255)
                   aTTAAGAATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATg                                                                                                              >  3:263383/1‑139 (MQ=255)
                       agaATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCa                                                                                                          <  4:263383/139‑1 (MQ=255)
                        gaATACGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCaa                                                                                                         >  7:346440/1‑139 (MQ=255)
                            aCGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCAt                                                                                                     >  3:155782/1‑139 (MQ=255)
                             cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             <  3:424698/114‑1 (MQ=255)
                             cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             >  4:424698/1‑114 (MQ=255)
                             cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             <  5:393741/114‑1 (MQ=255)
                             cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             >  6:393741/1‑114 (MQ=255)
                             cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCtata                                                                                                                   <  5:446884/124‑1 (MQ=255)
                             cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCtata                                                                                                                   >  6:446884/1‑124 (MQ=255)
                             cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCt                                                                                                                      >  7:86207/1‑121 (MQ=255)
                             cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCAt                                                                                                     >  1:318644/1‑138 (MQ=255)
                             cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCAt                                                                                                     >  1:245202/1‑138 (MQ=255)
                             cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCAt                                                                                                     >  7:115974/1‑138 (MQ=255)
                             cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCAt                                                                                                     >  4:398415/1‑138 (MQ=255)
                             cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCAt                                                                                                     >  1:33553/1‑138 (MQ=255)
                             cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCAt                                                                                                     >  2:198960/1‑138 (MQ=255)
                             cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCAt                                                                                                     >  7:379154/1‑138 (MQ=255)
                             cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑TAAT‑TTT‑TTAGTTAAATAGTTAGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGATATACTATGCTCAATCAt                                                                                                     >  1:339932/1‑138 (MQ=255)
                             cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑T‑AT‑TTTCTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTcaca                                                                                                                                >  6:203660/1‑111 (MQ=255)
                             cGCTTTCATCATAAATCATGATAGCGTTTTCGTCAAC‑T‑AT‑TTTCTTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTcaca                                                                                                                                <  5:203660/111‑1 (MQ=255)
                                     tcatAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGaaagaaag                                                                                            <  8:115974/139‑1 (MQ=255)
                                     tcatAAATCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGaaagaaag                                                                                            <  5:422690/139‑1 (MQ=255)
                                          aaTCATGATAGCGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGa                                                                                       <  8:34937/139‑1 (MQ=255)
                                                     cGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             >  2:213121/1‑90 (MQ=255)
                                                     cGTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAata                                                                                                                             <  1:213121/90‑1 (MQ=255)
                                                      gTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGa                                                                           <  4:155782/139‑1 (MQ=255)
                                                      gTTTTCGTCAAC‑TATT‑TTT‑TTAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATAATATGCTCAATCATGAAATAAAGCAGGAAAAGACAATGGa                                                                           <  4:209723/139‑1 (MQ=255)
                                                                          t‑ttAGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACaaa                                                          <  2:318644/138‑1 (MQ=255)
                                                                          t‑ttAGTTAAATAGTTAGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACaaa                                                          <  1:333073/138‑1 (MQ=255)
                                                                              aGTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACaaaagg                                                       <  1:198960/138‑3 (MQ=255)
                                                                               gTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGTAAACTCATGCATTACAAAAGGtt                                                     >  4:454354/1‑139 (MQ=255)
                                                                               gTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGtt                                                     >  7:343430/1‑139 (MQ=255)
                                                                               gTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGtt                                                     <  5:310302/139‑1 (MQ=255)
                                                                               gTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGtt                                                     <  8:343430/139‑1 (MQ=255)
                                                                               gTTAAATAGTTTGATATAACATGTAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGtt                                                     <  3:52713/139‑1 (MQ=255)
                                                                                                 acatgtAGACAAAAAATCGTAAAAATTAATTGTGAAATACTTCACAATATAGTGCTATACTCTGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGaa                                    <  6:61515/133‑1 (MQ=255)
                                                                                                  catgtAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGaaa                                   >  7:447523/5‑137 (MQ=255)
                                                                                                  catgtAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGaaa                                   >  2:140311/5‑137 (MQ=255)
                                                                                                  catgtAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGaaa                                   >  5:410674/5‑137 (MQ=255)
                                                                                                      tAGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGAAAAAAc                               >  3:324214/1‑138 (MQ=255)
                                                                                                       aGACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGAAAAAAca                              >  5:173844/1‑137 (MQ=255)
                                                                                                        gACAAAAATTCGTAAAAATTAATTGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGAAAAAAcaa                             <  6:410674/138‑3 (MQ=255)
                                                                                                                              ttGTGAAATACTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGAAAAAACAAAACATATTCGCTTCAAGCAAAAt      <  6:173844/139‑1 (MQ=255)
                                                                                                                                   aaataCTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGaa                                    <  1:343983/104‑1 (MQ=255)
                                                                                                                                   aaataCTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGaa                                    >  2:343983/1‑104 (MQ=255)
                                                                                                                                   aaataCTTCACAATATCGTGCTATACTATGCTCAATCATGAAAGAAAGCAGGAAAAGACAATGGAAACTCAAGCATTACAAAAGGTTGAACAGTATGCTTTGAAAAAACAAAACATATTCGCTTCAAGCAAAATCCGt  >  8:483021/1‑138 (MQ=255)
                                                                                                                                      |                                                                                                                                      
CACAATCCCGCTTATTCAGATTGAGAATACGCTTTCATCATAAATTATGATAGCGTTTTCGTCAAC‑T‑GT‑TTT‑TTAGTTAAATAGTTTGATAAAACTTTTAGACAAAAATTCGTAAAAACTATTTGTGAAAAACTTCACAATATCGTGCTATACTATGCTCAACCATCAAAGAAAGCAGGAAAAAACAATGGAAACTCAAGCATTGCAAAAAGTTGAACAGTACGCTTTGAACAAACTAAACATATTTGTTTCTAGCAAAATCCGT  >  CP006881/3723000‑3723264

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑