Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	52,896	T→C	V45A (GTT→GCT)	U712_00225 →	Protein veg

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	52,896	0	T	C	100.0%	344.5 / NA	92	V45A (GTT→GCT)	U712_00225	Protein veg
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (40/52);  total (40/52)

CAATGGCGAAGACGTTGTCCGATATTAAAAGATCGCTTGATGGGAATTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGTTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATATTTTGACTGAGACTGTTGAGCTGACATTTAATGATGACGCCGCAAGCTCAGTGGCATTTTAACGGGCAGT  >  CP006881/52761‑53031                                                                                                                                        |                                                                                                                                        cAATGGCGAAGACGTTGTCCGATAATAACAGATCGCGTGATGCGAATTTACGAAAAAGGCTGACCTTAAAAGCAAACGGTGTCCGCCGAAAAACGATTGAGCGTTCGCGCATTTTAGCTGAGACGTACCCTTCTGcttt                                                                                                                                      <  8:471109/139‑1 (MQ=255)  aaTGGCGAAGACGTTGTCCGATATTAAAAGATCGCTTGATGGGAATTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGctttt                                                                                                                                     <  8:60884/139‑1 (MQ=255)  aaTGGCGAAGACGTTGTCCGATATTAAAAGATCGCTTGATGGGAATTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGctttt                                                                                                                                     >  7:115314/1‑139 (MQ=255)   aTGGCGAAGACGTTGTCCGATATTAAAAGATCGCTTGATGGGAATTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTtg                                                                                                                                    <  2:402330/139‑1 (MQ=255)      gagAAGACTTTGTCCGATATTAAAAGATCGCTTGTTTGGAATTTAGTTAAAAGGCTGACGTAAAAATCAAACGGTGGCTGCCGAATAACGATTGAGCGTTCTGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGa                                                                                                                                 <  3:12677/137‑1 (MQ=255)      gCGAAGACGTTGTCCGATATTAAAAGATCGCTTGATGGGAATTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGa                                                                                                                                 <  4:129785/139‑1 (MQ=255)      gCGAAGACGTTGTCCGATATTAAAAGATCGCTTGATGGGAATTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGa                                                                                                                                 <  7:133565/139‑1 (MQ=255)         aaGACGTTGTCCGATATTAAAAGATCGCTTGATGGGAATTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATa                                                                                                                               >  3:56273/1‑138 (MQ=255)            aCGTTGTCCGATATTAAAAGATCGCTTGATGGGAATTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAAc                                                                                                                           >  8:96234/1‑139 (MQ=255)               ttggacGATATTAAAAGAGAGCTGGATGGGAAGTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAg                                                                                                                        <  6:479993/134‑1 (MQ=255)                tGTCCGATATTAAAAGATCGCTTGATGGGAATTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACatc                                                                                                                           >  1:414317/1‑133 (MQ=255)                tGTCCGATATTAAAAGATCGCTTGATGGGAATTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAAc                                                                                                                           >  3:156091/1‑135 (MQ=255)                tGTCCGATATTAAAAGATCGCTTGATGGGAATTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAAc                                                                                                                           >  1:281275/1‑135 (MQ=255)                tGTCCGATATTAAAAGATCGCTAGATGGGAATTTAGGTAAAAGGCTGACGTTAAAATAAAACGGTGGCCTCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTCCCCTTCTGCTTTTGTGATACAAc                                                                                                                           >  4:443158/1‑135 (MQ=255)                tGTCCGATATTAAAAGATCGCTAGATGGGAATTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATAGAGCGTTCGGGCATATTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAg                                                                                                                        >  6:89849/1‑138 (MQ=255)                  tCCTATATTAAAAGATAGGGTGATGTTAATTTAGGTAAATGGCTTAATTTAAAAGCTATCTGTGGCCGCCGAAAAACGATTGAGCGTTCTTGCATTTTATCTGAGACGTACAATTCTGCTTTTGTTATACAACTAGATc                                                                                                                     <  4:106906/139‑1 (MQ=255)                    cGATATTAAAAGATCGCTTGATGGGAATTTAGGTAAAAGGCTGAAGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCa                                                                                                                    <  7:245036/138‑1 (MQ=255)                       tatTAAAAGATCGCTTGATGGGAATTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGAc                                                                                                                >  8:162917/1‑139 (MQ=255)                            aaaGATCGCTTGATGGGAATTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGaa                                                                                                           >  7:424732/1‑139 (MQ=255)                            aaaGATCGCTTGATGGGAATTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGaa                                                                                                           >  8:270400/1‑139 (MQ=255)                             aaGATCGCTTGATGGGAATTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAAc                                                                                                          <  7:480444/139‑1 (MQ=255)                             aaGATCGCTTGATGGGAATTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAAc                                                                                                          <  1:328634/139‑1 (MQ=255)                                 tCGCTTGATGGGAATTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGt                                                                                                      >  6:33503/1‑139 (MQ=255)                                 tCGCTTGATGGGAATTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGt                                                                                                      >  6:141300/1‑139 (MQ=255)                                 tCGCTTGATGGGAATTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGt                                                                                                      >  8:117607/1‑139 (MQ=255)                                 tCGCTTGATGGGAATTTAGGCAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGt                                                                                                      >  7:393736/1‑139 (MQ=255)                                  cGCTTGATGGGAATTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGtt                                                                                                     >  5:398462/1‑139 (MQ=255)                                   gCTTGATGGGAATTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGttt                                                                                                    >  7:246128/1‑139 (MQ=255)                                        aTGGTAATTTAGTTAAAAGGCTGACGTTAAAAGCAAACGGTGGCAGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGaaa                                                                                                <  8:424732/138‑1 (MQ=255)                                        aTGGGAATTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGaaa                                                                                                <  4:197729/138‑1 (MQ=255)                                        aTGGGAATTTAGGAAAAAGGCTGACGGTAAAAGCAAACGGTGGCCGCAGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGaaa                                                                                                <  8:393736/138‑1 (MQ=255)                                         tGGGAATTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAaga                                                                                              <  6:114255/139‑1 (MQ=255)                                           ggAATTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGa                                                                                                                                 <  1:386845/102‑1 (MQ=255)                                           ggAATTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGa                                                                                                                                 >  2:386845/1‑102 (MQ=255)                                           ggAATTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAagag                                                                                             <  7:48735/138‑1 (MQ=255)                                           ggAATTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAagag                                                                                             <  7:41509/138‑1 (MQ=255)                                             aaTTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGttt                                                                                          >  2:362076/1‑139 (MQ=255)                                               tttAGGTAAAAGGCTGACGTTAACAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCa                                                                                        <  2:429016/139‑1 (MQ=255)                                               tttAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCa                                                                                        <  3:283761/139‑1 (MQ=255)                                               tttAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCa                                                                                        >  5:28155/1‑139 (MQ=255)                                               tttAGGTAAAAGGCTGACGTAAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCa                                                                                        <  3:269355/139‑1 (MQ=255)                                                  aGGTAAAAGGCTGACGTTAAACGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATa                                                                                      <  5:328368/138‑1 (MQ=255)                                                  aGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCTGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATa                                                                                      <  3:258357/138‑1 (MQ=255)                                                  aGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATa                                                                                      <  8:246128/138‑1 (MQ=255)                                                  aGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATa                                                                                      <  7:96234/138‑1 (MQ=255)                                                    gTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAg                                                                                   <  2:328912/139‑1 (MQ=255)                                                       aaaGGCTGACGTTAAAAGCACACGGTGGCCGCCGAAAAACGCTTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTGTGAAAGAGTTTCATACAGTTa                                                                                >  1:241147/1‑139 (MQ=255)                                                       aaaGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGTGCATTTTAGCTGAGACGTACACTTCTGCTTTTGTGATACAACTAGATGAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTa                                                                                >  2:106220/1‑139 (MQ=255)                                                       aaaGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCa                                                                                        >  5:401096/1‑131 (MQ=255)                                                       aaaGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCa                                                                                        <  6:401096/131‑1 (MQ=255)                                                       aaaGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTa                                                                                <  1:23482/139‑1 (MQ=255)                                                       aaaGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTa                                                                                <  6:28155/139‑1 (MQ=255)                                                       aaaGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTa                                                                                <  8:186777/139‑1 (MQ=255)                                                           gCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTTATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCt                                                                            <  7:291937/139‑1 (MQ=255)                                                                 gTTAAACGCAAACGGGGGCCGCCGAAAAACGATTGAGCGTGCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATAtt                                                                      <  1:347571/139‑1 (MQ=255)                                                                 gTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATAtt                                                                      <  5:33503/139‑1 (MQ=255)                                                                 gTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATAtt                                                                      <  5:141300/139‑1 (MQ=255)                                                                 gTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATAtt                                                                      <  4:129823/139‑1 (MQ=255)                                                                      aaGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATATTTTGAc                                                                 <  7:72569/139‑1 (MQ=255)                                                                         cAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATATTTTGACTga                                                              <  2:289139/139‑1 (MQ=255)                                                                           aaCGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGa                                                                                                                                 <  2:129613/70‑1 (MQ=255)                                                                           aaCGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGa                                                                                                                                 >  1:129613/1‑70 (MQ=255)                                                                           aaCGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATATTTTGACTgaga                                                            >  6:38720/1‑139 (MQ=255)                                                                           aaCGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATATTTTGACTgaga                                                            <  2:10915/139‑1 (MQ=255)                                                                            aCGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATATTTTGACTGAGAc                                                           >  8:275357/1‑139 (MQ=255)                                                                               gTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATATTTTGACTGAGACTGt                                                        <  6:404374/139‑1 (MQ=255)                                                                                  gccgccGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGa                                                                                                                                 <  3:14037/63‑1 (MQ=255)                                                                                  gccgccGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGa                                                                                                                                 >  4:14037/1‑63 (MQ=255)                                                                                      ccgAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATATTTTGACTGAGACTGTTGAGCTg                                                 <  2:281275/139‑1 (MQ=255)                                                                                      ccgAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATATTTTGACTGAGACTGTTGAGCTg                                                 <  6:91169/139‑1 (MQ=255)                                                                                      ccgAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATATTTTGACTGAGACTGTTGAGCTg                                                 <  4:56273/139‑1 (MQ=255)                                                                                        gAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATATTTTGACTgaga                                                            <  7:208455/126‑1 (MQ=255)                                                                                        gAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATATTTTGACTgaga                                                            >  8:208455/1‑126 (MQ=255)                                                                                            atcGATTCCGCGGTCGGCCTTTTTAGCTTTGACGTACCCTTGTGCTTTTGTGATACAAATATATCAAGACGATAACTCGTTTGAAAGAGTTTCAAACAGTTATGCTGATATTTTGACTGCCACTGTTGAGCTGACAttt                                           <  2:348867/137‑1 (MQ=255)                                                                                                 ttGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCa                                                                                        <  8:431379/89‑1 (MQ=255)                                                                                                 ttGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCa                                                                                        >  7:431379/1‑89 (MQ=255)                                                                                                    aGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATATTTTGACTGAGACTGTTGAGCTGACATTTAAtgatga                                   <  7:446370/139‑1 (MQ=255)                                                                                                         tCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATAtt                                                                      <  6:132224/99‑1 (MQ=255)                                                                                                         tCGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATAtt                                                                      >  5:132224/1‑99 (MQ=255)                                                                                                          cGGGCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAACAGTTTCATACAGTTATGCTGATATTTTGACTGAGACTGTTGAGCTGACATTTAATGATGAcgccgc                             <  6:398462/139‑1 (MQ=255)                                                                                                             gCATTTTAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATATTTTGACTGAGACTGTTGAGCTGACATTTAATGATGACGCCGCAAg                          <  1:12581/139‑1 (MQ=255)                                                                                                                ttttAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAAc                                                                                                          <  7:73935/56‑1 (MQ=255)                                                                                                                ttttAGCTGAGACGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAAc                                                                                                          >  8:73935/1‑56 (MQ=255)                                                                                                                        gagaCGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATATTTTGACTGAGACTGTTGAGCTGACATTTAATGATGACGCCGCAAGCTCAGTGGCag               >  1:116237/1‑138 (MQ=255)                                                                                                                           aCGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATATTTTGACTGAGACTGTTGAGCt                                                  <  6:305011/101‑1 (MQ=255)                                                                                                                           aCGTACCCTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATATTTTGACTGAGACTGTTGAGCt                                                  >  5:305011/1‑101 (MQ=255)                                                                                                                                cccTTCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATATTTTGACTGAGACTGTTGAGCTGACATTTAATGATGACGCCGCAAGCTCAGTGGCATTTTAACg        <  4:144228/138‑1 (MQ=255)                                                                                                                                   ttCTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGAGATTTTGACTGAGACTGTTGAGCTGACATTTAATGATGACGCCGCACGCTCAGTGGAATTTTACCggg      >  6:48031/1‑137 (MQ=255)                                                                                                                                     cTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATATTTTGACTGAGACTGTTGAGCTGACATTTAATGATGACGCCGCAAGCTCAGTGGCATTTTAACGGGCAGt  >  8:180649/1‑139 (MQ=255)                                                                                                                                     cTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATATTTTGACTGAGACTGTTGAGCTGACATTTAATGATGACGCCGCAAGCTCAGTGGCATTTTAACGGGCAGt  >  2:423226/1‑139 (MQ=255)                                                                                                                                     cTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATATTTTGACTGAGACTGTTGAGCTGACATTTAATGATGACGCCGCAAGCTCAGTGGCATTTTAACGGGCAGt  >  1:142016/1‑139 (MQ=255)                                                                                                                                     cTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATATTTTGACTGAGACTGTTGAGCTGACATTTAATGATGACGCCGCAAGCTCAGTGGCATTTTAACGGGCAGt  >  1:173230/1‑139 (MQ=255)                                                                                                                                     cTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATATTTTGACTGAGACTGTTGAGCTGACATTTAATGATGACGCCGCAAGCTCAGTGGCATTTTAACGGGCAGt  >  5:39738/1‑139 (MQ=255)                                                                                                                                     cTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATATTTTGACTGAGACTGTTGAGCTGACATTTAATGATGACGCCGCAAGCTCAGTGGCATTTTAACGGGCAGt  >  7:259468/1‑139 (MQ=255)                                                                                                                                     cTGCTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATATTTTGACTGAGACTGTTGAGCTGACATTTAATGATGACGACGCAAGCTCAGTGGTATTTTAACGGGCAGt  >  1:416818/1‑139 (MQ=255)                                                                                                                                        |                                                                                                                                        CAATGGCGAAGACGTTGTCCGATATTAAAAGATCGCTTGATGGGAATTTAGGTAAAAGGCTGACGTTAAAAGCAAACGGTGGCCGCCGAAAAACGATTGAGCGTTCGGGCATTTTAGCTGAGACGTACCCTTCTGTTTTTGTGATACAACTAGATCAAGACGAGAACTCGTTTGAAAGAGTTTCATACAGTTATGCTGATATTTTGACTGAGACTGTTGAGCTGACATTTAATGATGACGCCGCAAGCTCAGTGGCATTTTAACGGGCAGT  >  CP006881/52761‑53031

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑