BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP006881	2,054,382	A→C	intergenic (+60/‑41)	U712_10180 → / → U712_10185	Putative aldehyde dehydrogenase dhaS/Squalene‑‑hopene cyclase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP006881	2,054,382	0	A	C	100.0%	425.1 / NA	111	intergenic (+60/‑41)	U712_10180/U712_10185	Putative aldehyde dehydrogenase dhaS/Squalene‑‑hopene cyclase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (50/61); total (50/61)

Only 100 of 111 total aligned reads displayed.

GGACGAGAAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTAAAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTACCGAGTTAAGAGACAGGCAAAATGCTGATGGTTCATGGACATT  >  CP006881/2054248‑2054514

ggACGAGAAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAg                                                                                                                                   <  2:134696/138‑1 (MQ=255)

 gACGAGAAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGAc                                                                                                                                 >  6:299393/1‑139 (MQ=255)

 gACGAGAAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGAc                                                                                                                                 >  3:39187/1‑139 (MQ=255)

 gACGAGAAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGAc                                                                                                                                 >  5:22763/1‑139 (MQ=255)

  aCGATAAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTACCATGTATGTTTAAAAAACTTCTGCATGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACATGACg                                                                                                                                <  8:34386/139‑1 (MQ=255)

  aCGAGAAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAATTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACg                                                                                                                                <  6:22763/139‑1 (MQ=255)

  aCGAGAAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACg                                                                                                                                <  1:304032/139‑1 (MQ=255)

  aCGAGAAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACg                                                                                                                                <  3:269235/139‑1 (MQ=255)

  aCGAGAAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACg                                                                                                                                <  3:340190/139‑1 (MQ=255)

  aCGAGAAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACg                                                                                                                                <  5:149560/139‑1 (MQ=255)

  aCGAGAAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACg                                                                                                                                <  6:200656/139‑1 (MQ=255)

  aCGAGAAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACg                                                                                                                                <  6:357453/139‑1 (MQ=255)

  aCGAGAAATGGGAGCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATCGGTAAACCATGAAGACTACCATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACg                                                                                                                                <  2:337610/139‑1 (MQ=255)

   cGAGAAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGc                                                                                                                               <  1:117359/139‑1 (MQ=255)

    gagaAATTGGTTCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCt                                                                                                                              <  1:481435/139‑1 (MQ=255)

    gagaAATTGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCt                                                                                                                              <  5:254314/139‑1 (MQ=255)

    gagaAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCt                                                                                                                              <  6:364596/139‑1 (MQ=255)

    gagaAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCt                                                                                                                              <  4:478826/139‑1 (MQ=255)

    gagaAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCt                                                                                                                              <  5:391849/139‑1 (MQ=255)

    gagaAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCt                                                                                                                              <  3:224994/139‑1 (MQ=255)

     agaAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCt                                                                                                                              >  2:420184/1‑138 (MQ=255)

     agaAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTg                                                                                                                             <  1:20810/139‑1 (MQ=255)

       aaaTGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGaa                                                                                                                           <  6:372818/139‑1 (MQ=255)

            ggATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAatata                                                                                                                       >  2:280117/1‑138 (MQ=255)

            ggATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAatata                                                                                                                       >  8:358989/1‑138 (MQ=255)

            ggATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAat                                                                                                                          <  5:363202/135‑1 (MQ=255)

                 atatGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGc                                                                                                                  <  2:34128/138‑1 (MQ=255)

                 atatGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCt                                                                                                                 <  6:24507/139‑1 (MQ=255)

                       cTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACg                                                                                                                                >  6:4902/1‑118 (MQ=255)

                       cTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACg                                                                                                                                <  1:76610/118‑1 (MQ=255)

                       cTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACg                                                                                                                                >  2:76610/1‑118 (MQ=255)

                       cTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGaa                                                                                                           <  4:125275/139‑1 (MQ=255)

                         tGGATAATTACACAGAAGTCTAAAGAGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCATCAGTTTTTTTCTATCTGTAATTGCAGTACAAGACGCTGAAAATATATGATTCTGAAg                                                                                                          >  2:8925/1‑138 (MQ=255)

                         tGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAg                                                                                                          >  8:219110/1‑138 (MQ=255)

                                ttACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAg                                                                                                  >  4:226537/1‑139 (MQ=255)

                                ttACAAAGAAGTCAAAAGAGAATGGGTAAACCTTCCAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTATCTTTCTGTAAACGCAGGACATGACACTGATAATATATTATTCTGAAGCAgattat                                                                                                  >  6:371425/1‑134 (MQ=255)

                                 tACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACg                                                                                                                                <  7:17125/108‑1 (MQ=255)

                                     caGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGa                                                                                             >  6:222739/1‑139 (MQ=255)

                                      aGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATTTATATGCTTCTGAAGGAGTTGAGCGTGAt                                                                                            <  5:134609/139‑1 (MQ=255)

                                        aaGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACg                                                                                                                                <  2:266845/101‑1 (MQ=255)

                                        aaGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACg                                                                                                                                >  1:266845/1‑101 (MQ=255)

                                        aaGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTg                                                                                                                             >  2:429286/1‑104 (MQ=255)

                                        aaGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTg                                                                                                                             <  1:429286/104‑1 (MQ=255)

                                        aaGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTg                                                                                              <  3:356731/135‑1 (MQ=255)

                                        aaGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTg                                                                                              >  4:356731/1‑135 (MQ=255)

                                        aaGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATgg                                                                                          >  2:206256/1‑139 (MQ=255)

                                          gTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGCCGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGc                                                                                        >  7:330922/1‑139 (MQ=255)

                                           tCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGca                                                                                       <  1:420184/139‑1 (MQ=255)

                                           tCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGca                                                                                       <  1:280117/139‑1 (MQ=255)

                                           tCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGca                                                                                       <  1:206256/139‑1 (MQ=255)

                                               aaGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACt                                                                                   <  8:161725/139‑1 (MQ=255)

                                                aGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACtt                                                                                  <  4:204870/139‑1 (MQ=255)

                                                  tgtATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGACCGTGATGGGCACACtt                                                                                  >  8:392961/1‑137 (MQ=255)

                                                    tATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCt                                                                                                                              <  7:459119/91‑1 (MQ=255)

                                                    tATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAATGAGTTGAGCGTGATGGGca                                                                                       <  7:61556/130‑1 (MQ=255)

                                                    tATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGAt                                                                                            <  2:73805/125‑1 (MQ=255)

                                                    tATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGAt                                                                                            >  1:73805/1‑125 (MQ=255)

                                                    tATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGca                                                                                       >  8:61556/1‑130 (MQ=255)

                                                    tATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGca                                                                                       <  6:484983/130‑1 (MQ=255)

                                                    tATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGca                                                                                       >  5:484983/1‑130 (MQ=255)

                                                    tATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGAAGCt                                                                                                                              >  8:459119/1‑91 (MQ=255)

                                                            aaCCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTg                                                                                                                             >  4:358528/1‑84 (MQ=255)

                                                            aaCCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTg                                                                                                                             <  3:358528/84‑1 (MQ=255)

                                                            aaCCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAatat                                                                                                                        >  1:21573/1‑89 (MQ=255)

                                                            aaCCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAatat                                                                                                                        <  2:21573/89‑1 (MQ=255)

                                                            aaCCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGt                                                                       >  5:375768/1‑138 (MQ=255)

                                                            aaCCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGt                                                                       >  7:400208/1‑138 (MQ=255)

                                                            aaCCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGt                                                                       >  1:451604/1‑138 (MQ=255)

                                                            aaCCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGt                                                                       >  7:369380/1‑138 (MQ=255)

                                                            aaCCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGt                                                                       <  7:10839/138‑1 (MQ=255)

                                                            aaCCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGt                                                                       >  4:55907/1‑138 (MQ=255)

                                                                  gAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACg                                                                                                                                >  1:212132/1‑75 (MQ=255)

                                                                  gAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACg                                                                                                                                <  2:212132/75‑1 (MQ=255)

                                                                  gAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCt                                                                                                                              >  1:161634/1‑77 (MQ=255)

                                                                  gAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCt                                                                                                                              <  2:161634/77‑1 (MQ=255)

                                                                  gAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGca                                                                                       <  1:55180/116‑1 (MQ=255)

                                                                  gAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGca                                                                                       >  2:55180/1‑116 (MQ=255)

                                                                        tAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAATGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCa                                                           >  6:253415/1‑138 (MQ=255)

                                                                        tAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCa                                                           >  1:207751/1‑138 (MQ=255)

                                                                               tatgtTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGaaaa                                                   <  5:37162/139‑1 (MQ=255)

                                                                                atgtTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAAc                                                  >  5:49869/1‑139 (MQ=255)

                                                                                 tgtTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGca                                                                                       <  1:260705/101‑1 (MQ=255)

                                                                                 tgtTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGca                                                                                       >  2:260705/1‑101 (MQ=255)

                                                                                     tAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCt                                                                                                                              <  1:324832/58‑1 (MQ=255)

                                                                                      aaaaaaCTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGCCGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTAc                                            >  7:442985/1‑139 (MQ=255)

                                                                                       aaaaaCTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTAcc                                           <  2:451604/139‑1 (MQ=255)

                                                                                       aaaaaCTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTAc                                            <  2:196403/138‑1 (MQ=255)

                                                                                       aaaaaCTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTAc                                            <  5:222739/138‑1 (MQ=255)

                                                                                       aaaaaCTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTAc                                            <  8:400208/138‑1 (MQ=255)

                                                                                          aaCTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTACCGAg                                        >  7:265381/1‑139 (MQ=255)

                                                                                            ctgctgCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTACCGAGtt                                      <  8:265381/139‑1 (MQ=255)

                                                                                                    tgccAGCAGTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTACCGAGTTAAgaga                                >  3:422148/1‑137 (MQ=255)

                                                                                                       cagcagTTTTTTTCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTACCGAGTTAAGAGACAgg                            >  8:54550/1‑138 (MQ=255)

                                                                                                               tttttCTTTCTGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTACCGAGTTAAGAGACAGGCAAAATGCt                   >  3:279420/1‑139 (MQ=255)

                                                                                                                  ttctttctGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTACCGAGTTAAGAGACAGGCAAAATGCTGa                 <  4:78829/138‑1 (MQ=255)

                                                                                                                       tctGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGca                                                                                       <  6:89309/63‑1 (MQ=255)

                                                                                                                       tctGTAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGca                                                                                       >  5:89309/1‑63 (MQ=255)

                                                                                                                           tAATGGCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTACCGAGTTAAGAGACAGGCAAAATGCTGATGGTTCAt         <  7:392961/137‑1 (MQ=255)

                                                                                                                                gCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTACCGAGTTAAGAGACAGGCAAAATGCTGATGGTTCATGGACAtt  <  4:396027/139‑1 (MQ=255)

                                                                                                                                gCAGTACAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTACCGAGTTAAGAGACAGGCAAAATGCTGATGGTTCATGGACAtt  <  6:49869/139‑1 (MQ=255)

GGACGAGAAATGGGATCATATGCCTTGGATAATTACACAGAAGTCAAAAGTGTATGGGTAAACCTTGAAGACTAACATGTATGTTTAAAAAACTGCTGCCTGCCAGCAGTTTTTTTCTTTCTGTAATGGCAGTAAAAGACGCTGAATATATATGCTTCTGAAGGAGTTGAGCGTGATGGGCACACTTCAGGAGAAAGTGAGGCGTTTTCAAAAGAAAACCATTACCGAGTTAAGAGACAGGCAAAATGCTGATGGTTCATGGACATT  >  CP006881/2054248‑2054514

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`