| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 224,585 | G→T | 9.0% | A118E (GCA→GAA) | U712_01035 ← | Uncharacterized protein ybdN |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 224,585 | 0 | G | T | 9.0% | 310.9 / 2.1 | 117 | A118E (GCA→GAA) | U712_01035 | Uncharacterized protein ybdN |
| Reads supporting (aligned to +/- strand): ref base G (39/65); new base T (11/2); total (50/67) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.88e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 118 total aligned reads displayed.
CGCCGCTGAATTGGAACGTTCCGCTGCCTGATTTGATTCGGTCTTCAATTGAAAGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATCCCTGTATACGCGCTCTGGTATGTACTCCTCATGTATACTTTTT > CP006881/224448‑224720 | cgccgcTGAATTGGAACGTTCCGCTGCCTGATTTGATTCGGTCTTCAATTGAAAGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTg > 3:120640/1‑138 (MQ=255) gccgcTGAATTGGAACGTTCCGCTGCCTGATTTGATTCGGTCTTCAATTGAAAGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCa < 4:343585/139‑1 (MQ=255) aaTTGGAACGTTCCGCTGCCTGATTTGATTCGGTCTTCAATTGAAAGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCataaataa < 7:178889/139‑1 (MQ=255) aCGTTCCGCTGCCTGATTTGATTCGGTCTTCAATTGAAAGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAaagaag > 8:151443/1‑138 (MQ=255) gTTCCGCTGCCTGATTTGATTCGGTCTTCAATTGAAAGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGATGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGaaa < 3:4507/139‑1 (MQ=255) gTTCCGCTGCCTGATTTGATTCGGTCTTCAATTGAAAGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGaaa < 1:116959/139‑1 (MQ=255) gTTCCGCTGCCTGATTTGATTCGGTCTTCAATTGAAAGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGaaa < 3:77967/139‑1 (MQ=255) gTTCCGCTGCCTGATTTGATTCGGTCTTCAATTGAAAGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGaaa < 4:220612/139‑1 (MQ=255) ttCCGCTGCCTGATTTGATTCGGTCTTCAATTGAAAGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTGTGCATTTGGATAAATATAAGAAGaaaa > 1:78361/1‑139 (MQ=255) ttCCGCTGCCTGATTTGATTCGGTCTTCAATTGAAAGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGaaaa > 4:98257/1‑139 (MQ=255) ttCCGCTGCCTGATTTGATTCGGTCTTCAATTGAAAGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGaaaa > 1:331372/1‑139 (MQ=255) ttCCGCTGCCTGATTTGATTCGGTCTTCAATTGAAAGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCGGCATTTGCATAAATAAAATAAGaaa > 1:104748/1‑138 (MQ=255) ccGCTGCCTGATTTGATTCGGTCTTCAATTGAAAGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGGTTTTGGCGTGTGGATTTTCATAAATAAAAGAATAAAACg > 1:118900/1‑139 (MQ=255) cTGCCTGATTTGATTCGGTCTTCAATTGAAAGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTAt < 6:263672/139‑1 (MQ=255) tGCCTGATTTGATTCGGTCTTCAATTGAAAGAGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGGCTGCATTTGCATAAATAAAAGAAGAAAACGTAtt < 3:61003/139‑1 (MQ=255) ccTGATTTGATTCTGTCTTAAATTGAAAGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTa < 4:305795/138‑1 (MQ=255) ccTGATTTGATTCGGTCTTCAATTGAAAGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTAtt < 2:250392/137‑1 (MQ=255) tgatttgattCGGTCTTCAATTGAAAGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGGGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAggg > 2:24529/1‑139 (MQ=255) gattCGGTCTTCAATTGAAAGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTtaat < 1:296008/138‑1 (MQ=255) gattCGGTCTTCAATTGAAAGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTtaat < 3:97100/138‑1 (MQ=255) ttCGGTCTTCAATTGAAAGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTtaataa > 4:243374/1‑138 (MQ=255) gTCTTCAATTGAAAGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTtaat > 5:312879/1‑132 (MQ=255) gTCTTCAATTGAAAGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTtaat < 6:312879/132‑1 (MQ=255) gAAAGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTga < 4:228503/138‑1 (MQ=255) aaaGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTTGGGGTCTTCATTTGGATAAATAAAATAAAAAAAAGTATTATGGTTAATAAATTCTGTCACTTgat > 2:114629/1‑137 (MQ=255) aaaGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTGTGACATTGCATTAATAAAACAAGAAAAACTTATATGGTTTATAACTTGTGTCCCGTgag > 1:222272/1‑138 (MQ=255) aaaGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGGTTTGGGGGTCTGCATTTGCATTAATAAAAGAAGAAAACGTATTTTGGGTTATAACTTCTGTCCCTTgag > 2:302509/1‑138 (MQ=255) aaaGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGGTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATTACTTGTGTGCCTTgag > 1:335411/1‑138 (MQ=255) aGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGaaa < 1:257479/139‑1 (MQ=255) cGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTTACACTTTCACATAGAAGGTATCCGTCGTGGTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACa < 7:110953/139‑1 (MQ=255) cGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGGATTTGGATAAATAAAAGAAGAAAACGTATTAGGGTTAATTACTTATGTCCCTTTAGaaa > 8:305572/1‑137 (MQ=255) gTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTAtt < 7:305572/139‑1 (MQ=255) tCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAggg > 3:238431/1‑97 (MQ=255) tCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTg > 7:236534/1‑139 (MQ=255) tCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGGTTTGGGGGGGTGCATTTTGATAAATAAAAAAAAAAAAAGTATTTTTGTTTATAAAATGTGTGACTATGGAAACAACTATTGTGTTCttt > 2:163442/1‑138 (MQ=255) cAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTTCa > 5:263144/1‑68 (MQ=255) cAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCa < 6:263144/68‑1 (MQ=255) cAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGaaa < 7:302864/84‑1 (MQ=255) cAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTAt > 3:155409/1‑90 (MQ=255) cAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTAt < 4:155409/90‑1 (MQ=255) cAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTtaat < 5:135102/100‑1 (MQ=255) cAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAAAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGt > 4:324207/1‑138 (MQ=255) cAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGGTTTGGGCGTCTGCATTTTCATAAATAAAAGAAGAAAACGTATTAGGGTtaat > 6:135102/1‑100 (MQ=255) taGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGGTTTGGGCGGCGGCATTTGCATAAATAAAAGAATAAAAAGGATTAGTGTTAATTACTTGTGTACCGTGAGAAACAGGTTTTGTGTTCTTGTGATaaa > 6:352595/1‑139 (MQ=255) gTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGGGTCTGCATTTTGATAAATAAAAGAAGAAAACGTATTATGGTTAATAACTTCTGTCCCGTGAGAAACAGGTATTCTGTTGTTGTCGTAAAtt > 8:337885/1‑138 (MQ=255) gTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTTGATTTAATAAATAATAAAAAGGATTTTGTGTTATAACTTCTGTACCTTGAGTAAAAGGTAATATGTTGTTGTGAAAAAttt > 6:362153/1‑139 (MQ=255) gTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTTGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGCCATAAAttt > 8:1289/1‑139 (MQ=255) gTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTgaga < 3:302376/110‑1 (MQ=255) gTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTgaga > 4:302376/1‑110 (MQ=255) gTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAAtt > 3:345423/1‑138 (MQ=255) gTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGGTTTTGGCGGCGGCCATTGCATAAAAAAAAGAATAAAAAGTATTAGGGTTTATAAAATGAGTCCCGTGAGAAACAGGTATTGTGTTATTGTCATaaaat > 1:254296/1‑136 (MQ=255) gTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGGTTTGGGCGTCTGCATTTTCATTAATAAAATAAGAAAACGGATTAGGGTTAATAAATTCTGTCCCGATAGAAAAAGGTTTTGGGTTATTGTCATAAAtt > 8:337089/1‑138 (MQ=255) ccTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGGATTAATAAAAGAAGAAAACGTATTATGGTTTATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTGTTGTCATAAATTTCaa > 3:315559/1‑139 (MQ=255) ccTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCaa > 5:64124/1‑139 (MQ=255) ccTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCaa > 8:361883/1‑139 (MQ=255) ccTCGTGACACTTTCACATAGAAGGTATCCGTCGTGGTTTGGGCGTGTGCATTTGCATAAATAAAATAATAAAACGTATTTGGGTTTATAACTTCTGTCCCTTTTGAAACAGGTATTGTGTTGTTGTGATAAATTTCaa > 5:217858/1‑139 (MQ=255) tCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAATAAAACCTAATAGGGGTAATAACTTATGTCACTTTAGAAAAAGGTATTCTGTTCGTTGCATAAATTTCAAta > 1:53368/1‑138 (MQ=255) acacTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCa < 5:362153/138‑1 (MQ=255) acacTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCAt < 3:109126/139‑1 (MQ=255) acacTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCAt < 2:118900/139‑1 (MQ=255) acacTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCAt < 2:206271/139‑1 (MQ=255) acacTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAACAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCAt < 3:324207/139‑1 (MQ=255) acTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATcc < 3:98257/139‑1 (MQ=255) acTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATcc < 2:185355/139‑1 (MQ=255) acTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGGTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATcc < 2:250503/139‑1 (MQ=255) acTTTCACATAGAAGGTATCCGTCGTGTGATGGGCGTCTGCATTAGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATcc < 1:249225/139‑1 (MQ=255) cTTTCACATAGAAGGTATCCGTCGTGGTTTGGGGGTGTGGATTTGCATTAATAAAAGAAGAAAACCTATTAGGGGTTATTACTTCTGTCCCTTTGGGAAAAGGTTTTGTGTTCTTGTCATATATTTGAATTTTGAtg > 7:356437/1‑136 (MQ=255) acaTAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATCCCTGtat < 5:98381/139‑1 (MQ=255) tAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATCCCTGTATAcg < 4:345423/139‑1 (MQ=255) gAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATCCCTGTATAcgcg < 1:114629/139‑1 (MQ=255) aaGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATCCCTGTATACgcgc < 1:123670/139‑1 (MQ=255) aGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATCCCTGTATACGCGct < 1:106060/139‑1 (MQ=255) aGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATCCCTGTATACGCGct < 7:71798/139‑1 (MQ=255) aGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATCCCTGTATACGCGct < 1:337582/139‑1 (MQ=255) aGGTATCCGTCGTGTTTAGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATCCCTGTATACGCGct < 4:104873/139‑1 (MQ=255) aGGTATCCGTCGTGTGTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATCCCTGTATACGCGct < 8:257040/139‑1 (MQ=255) ggTATCCGTCGTGTTTTGGGCTTCTGCATTTGCTTAAATAAAAGAAGTAAACGTATTAGGGTTTATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATCCCTGTATACGCGct < 8:254011/138‑1 (MQ=255) tCCGTCGTGTTTTGGGGGTGAGCATTTTCATAAAATAAATATAAAAAAGTATTTGGGTTTATTACTTGTGTCCCTTGAGAAACAGGTTTTCTGTTGTTTTCATATATTTGAATTTTTATCCCAGTTTACGCGctaggt > 4:292704/1‑134 (MQ=255) tCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATCCCTGTATACGCGCTCTGGt < 7:361883/139‑1 (MQ=255) tCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATCCCTGTATACGCGCTCTGGt > 7:150069/1‑139 (MQ=255) tCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCAAAAATTTCAATTTTCATCCCTGTATACGCGCTCTGGt < 4:120640/139‑1 (MQ=255) tCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGGTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATCCCTGTATACGCGCTCTGGt < 3:292704/139‑1 (MQ=255) tCCGTCGTGTTTTGGGCGGCTGCAAGTGCATAAAAAAAAGAAGAAAACGTATTAGGGTTTATATCATCTGTCCCATGAGAAACAGGTATTCTGTTCTTGTCATAAATTTAAATTTTAATCCCTGTATACGCGCTCTGGt > 7:176694/1‑139 (MQ=255) gtcgtGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATCCCTGTATACGCGCTCTGGTATg < 2:78361/139‑1 (MQ=255) gtcgtGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATCCCTGTATACGCGCTCTGGTATg < 8:118135/139‑1 (MQ=255) gtcgtGTTTTGGGCGGCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATCCCTGTATACGCGCTCTGGTATg < 2:104748/139‑1 (MQ=255) tcgtGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATCCCTGTATAcgcg < 7:250375/128‑1 (MQ=255) tcgtGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATCCCTGTATAcgcg > 8:250375/1‑128 (MQ=255) tcgtGGTTTGGGGGGGTTCATTTGCATAAATAAAATAAGAAAAACTATTAGGGTTTATAACTTATGTCCCATGAGAAAACAGTATTATTTTCTTTTGATAAATTTAAATTTTGATACCTGTATAAGCGCTCTGGGATGt > 2:337582/1‑139 (MQ=255) tcgtGGTTTGGGCGTCTGCATTTTGATAAATAAAATAAATAAACGTATTTTGGTTAATAACTTCTGTGCCATTAGAAACAGGGTTTGTGTTCTTTGTATAAATTTAAATTTTGATCACTGGTTAAGCGCTCTgggttg > 4:338346/1‑134 (MQ=255) ttGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATCCCTGTATACGCGCTCTg > 4:312627/1‑126 (MQ=255) ttGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATCCCTGTATACGCGCTCTg < 3:312627/126‑1 (MQ=255) ttGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATCCCTGTATACGCGCTCTGGTATGTActcct < 8:236534/138‑1 (MQ=255) tGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATCCCTGTATACGCGCTCTGGTATGTActcctc < 4:315559/138‑1 (MQ=255) ggCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTATGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTATTGTCATAAATTTAAATTTTCATACCTGTATACGCGCTCTGGTATGTACTCCTCATg > 6:114056/1‑139 (MQ=255) gTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATCCCTGTATACGCGct < 8:329305/117‑1 (MQ=255) gTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATCCCTGTATACGCGCTCTGGTATGTACTCCTCATGtat < 7:337885/139‑1 (MQ=255) cTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATCCCTGTATACGCGct > 1:219523/1‑115 (MQ=255) tttGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATCCCTGTATACGCGCTCTGGTATGTACTCCTCATGTATACttttt < 5:352595/139‑1 (MQ=255) tttGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATCCCTGTATACGCGCTCTGGTATGTACTCCTCATGTATACttttt < 2:222272/139‑1 (MQ=255) | CGCCGCTGAATTGGAACGTTCCGCTGCCTGATTTGATTCGGTCTTCAATTGAAAGCGTAAAGTACATGTTTCCAGTATAGGTGCCTCGTGACACTTTCACATAGAAGGTATCCGTCGTGTTTTGGGCGTCTGCATTTGCATAAATAAAAGAAGAAAACGTATTAGGGTTAATAACTTCTGTCCCTTGAGAAACAGGTATTCTGTTCTTGTCATAAATTTCAATTTTCATCCCTGTATACGCGCTCTGGTATGTACTCCTCATGTATACTTTTT > CP006881/224448‑224720 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |