| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 3,905,563 | G→T | 12.9% | D86Y (GAT→TAT) | U712_20135 → | Uncharacterized protein yxcD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 3,905,563 | 0 | G | T | 12.9% | 141.2 / 4.6 | 86 | D86Y (GAT→TAT) | U712_20135 | Uncharacterized protein yxcD |
| Reads supporting (aligned to +/- strand): ref base G (41/32); new base T (5/8); total (46/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.66e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
GGTTCTTCGCTGAAGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATAAAGTTATTTCGTTTTTCCTA > CP006881/3905429‑3905699 | ggTTCTTCGCTGAAGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCCCAACTTCAATCCGGACGTGACCGTCGTTGAATTGAAAATTGATa > 7:77568/1‑138 (MQ=255)ggTTCTTCGCTGAAGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTTCAATTTGATaa > 1:234088/1‑139 (MQ=255) ttcttcGCTGAAGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTGGAATTTGAATTTTATAAg > 1:352924/1‑138 (MQ=255) ttcttcGCTGAAGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGAAGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTTATAAg > 8:344078/1‑138 (MQ=255) cttcGCTGAAGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGaa > 3:99720/1‑138 (MQ=255) ttcGCTGAAGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGaaa > 7:226275/1‑138 (MQ=255) tGAAGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGc > 8:223793/1‑139 (MQ=255) tGAAGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAAAAAAAAggg > 1:289225/1‑138 (MQ=255) aaGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAATGCtt > 4:256144/1‑139 (MQ=255) aaGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCtt > 4:11579/1‑139 (MQ=255) ttgggCCTGCACCACACGCAGCTTATGTCAGATGACATTTCAGAAGGAATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAACGGCTTCTCCGCCt < 8:181664/136‑1 (MQ=255) ggCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTgg > 7:22385/1‑139 (MQ=255) gCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTGGAATTGCAATTTTATAAGAAAAAAGGCTTCTCCGCCGTGGt > 8:134916/1‑139 (MQ=255) gCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGTCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGGCGTTTAATTGCTATTTGATAAGAAAAAAGTCTTCTCCGCCTTGGttttt > 6:291551/1‑139 (MQ=255) gCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTGGGATTGCAATTTTTTAATAAAAAAGGCGTAGCCGCCGTGGgtttt > 1:173685/1‑139 (MQ=255) acaAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCaa < 8:226275/139‑1 (MQ=255) agcTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAg > 8:22743/1‑138 (MQ=255) cTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAg > 4:224437/1‑136 (MQ=255) cTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACCAAg > 5:166271/1‑136 (MQ=255) cTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGAAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCag < 5:119254/139‑1 (MQ=255) tGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCagaag > 5:332587/1‑138 (MQ=255) aGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTTCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTAAACGAAGCAGAataata > 6:316015/1‑138 (MQ=255) aTGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTTAATTGCAATTTGATAAGAAAAAAAGCTTCTACGCCGTGGTTTTTGTAAAAGCAGCAAAAGAATaaa > 2:335085/1‑138 (MQ=255) aTGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTTCAATTTGATAATAAAAAATGAGTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAATAATaaa > 2:245459/1‑138 (MQ=255) aTGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATaaaa < 3:165164/139‑1 (MQ=255) aTGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATaaa > 8:284052/1‑138 (MQ=255) tcaCATTTCTTTAGTCATTATTTATTTATTAGATTAATACCAAAAATTCAATCCGGACTTTACGTTTTTTTATTTTAATTTTTAAAATAAAAAAGGCTTCTCCGGCTTGGTTTTTGTCAACGAAGCAGAAGAATaaaa < 6:23202/136‑1 (MQ=255) tGACTTTTCAGAAGGCATTATTCTGTTCTTAGATGAATACCACAACTTCAATCCGGAAGTTACCGTCGTTCAATTGCATTTTGATAAGAAAAAACGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATataa < 2:231991/138‑1 (MQ=255) aTTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTc < 8:303339/139‑1 (MQ=255) aTTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACCTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCGTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTc > 3:134890/1‑139 (MQ=255) tttCAAAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCGTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCt > 7:63832/1‑139 (MQ=255) taaGGAATTATTCAGTTCTTAGAGCAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTTATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 6:166271/138‑1 (MQ=255) gacggCATTATTCTGTTCTTAGAGTAATACCACAACTTCAATCGGGCCGTTACGGTCGTTGAATTGCAATTTGATACGAAAAACGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 8:173662/136‑1 (MQ=255) gAAGGCATTATTCAGTTCTTAGAGTAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 6:332587/139‑1 (MQ=255) gAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAACGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 7:134916/139‑1 (MQ=255) gAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 6:271878/139‑1 (MQ=255) gAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 4:341688/139‑1 (MQ=255) gAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 3:224437/139‑1 (MQ=255) gAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 3:144540/139‑1 (MQ=255) gAAGGCATTATTCAGTTCTTACAGTAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAACGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 2:78914/139‑1 (MQ=255) gAAGGCATTATTAATTTCTTAGAGTAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAATAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 5:114568/139‑1 (MQ=255) gAAGGAATTATTCAGTACTTAGAGAAATACCAAAAATTCAATCCGTACGTTACGGTCGTTTAATTGAATTTTTAAAACAAAAACCGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 2:352924/139‑1 (MQ=255) ctaGGCATTATTCCGTTATTAGAGAAAACCCACAACTTCAATCCGCACGTTCCCGTCGTTGAATTGAAATTTTAAAACAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 3:8510/137‑1 (MQ=255) cATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTtct > 4:233727/1‑86 (MQ=255) cATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTtct < 3:233727/86‑1 (MQ=255) aGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTGCGCCTTGGGTTTTGTCAACCAAGCAGAAAAATAAAAATTTATTAATAAAACCATACtacc > 5:304828/1‑136 (MQ=255) gTTCTTATAGCAATACCACAACTTCAATCCGGACGTTACCGGCGTTGAATTGAAATTTTATAACAAAAAACGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCcgc < 5:316015/139‑1 (MQ=255) ttCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTTCAATTTTATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCcg > 2:8090/1‑137 (MQ=255) ttCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTc < 1:75726/118‑1 (MQ=255) ttCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc > 7:86545/1‑124 (MQ=255) ttCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATc < 8:86545/124‑1 (MQ=255) ttCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCcgcg > 7:265600/1‑139 (MQ=255) ttCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCcg < 1:8090/137‑1 (MQ=255) ttCTTAGAGGAATACCACAACTTCAATCAGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTc > 2:75726/1‑118 (MQ=255) tattATAGTAATACCACAAAATAAATCCGGACGTTACCGTCTTTCAAATGCAATTTGATAACAAAAAACGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCcgcg < 3:11579/136‑1 (MQ=255) tCTTAGAGCAATACAACAACTTCAATCCGTACGTTACCGTCGTTGATTTGCAATTTGTTAATAAAAACCGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCcgcg < 7:204047/138‑1 (MQ=255) agagGAATACCACAACTTCAATCCGCACGTTACCGTCGTTGCAATGCAATTTGAAAACAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGt > 1:280149/1‑139 (MQ=255) gagGAATACCACAACTTCACTCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAACGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGt < 1:245459/138‑1 (MQ=255) agtaaTACCAAAACTTAAATCCGGACGTTACGGTAGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTaa < 8:265600/136‑1 (MQ=255) agcaaaaCCACACCTTCAATCCGGACTTTACGGTCTTTTAATTGAATTTTTATAATAAAAACGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTaa < 8:308805/133‑1 (MQ=255) acaaCCACAACTTCAATCCGCACGAAACCGTCGTTGAATTGCAATTTGAAAAGAAAAAAGGCTTCTCCGCCTTTGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGt < 2:289225/136‑1 (MQ=255) aaTACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATAAAACCTTACTCCGCGCGGGTAAGGt > 3:209139/1‑139 (MQ=255) tACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATa > 3:291141/1‑49 (MQ=255) tACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATa < 4:291141/49‑1 (MQ=255) tACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAATAAAAAAGGCTTGTCCGCCTTGGTTTTTGTGAACGAAGCAGAATAATAAAAATGTCTTAATAAAACCATACTACGCGCGGGTAAGGttt > 7:308805/1‑139 (MQ=255) tACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGttt > 6:365324/1‑139 (MQ=255) tACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCGTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGgtt > 6:118886/1‑139 (MQ=255) caACTTCAATCCGGACGTTACCGTCGTTGAATTGAAAATTGATAAGAAAAAAAGCGTCTACGCCATTGTTTTTTGAAAAGAAGCAGAAGAATAAAAATTTATTAATAAAACATTTCTCCGCGCCGGTAAGGttttttt > 2:56839/1‑138 (MQ=255) caACCTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAATAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTa < 4:134890/139‑1 (MQ=255) cTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAATAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTc < 8:165614/98‑1 (MQ=255) cTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTc > 7:165614/1‑98 (MQ=255) cTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCGTCTCCGCCTTGGTTTTTGTCAACGAAGCAGCAGAATAAAAATGTCTTAATAAAACCTTCCTCCGCGCGGGGAAGGGTTTTTTTATg > 8:71519/1‑139 (MQ=255) aTCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTTTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAAACTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTtc > 6:118876/1‑139 (MQ=255) aTCCGGACGTTACCGTCGTTGAATTGAAATTTGATAAGAAAAAATGCTTCACCGCCGTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCATACACCGCGCGCGTAAGGTTTTTTTAATGGTTtc > 4:132771/1‑139 (MQ=255) cGGACTTTACCGGCTTTGAATTCCAATTTGATAAGAAAAAACGCTTCTCCGCCTTGGTATTTGTCAACGAAGCAGAAGAATAAAAATGTGTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTctct < 8:77568/139‑1 (MQ=255) gACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCag < 8:161699/73‑1 (MQ=255) gACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCag > 7:161699/1‑73 (MQ=255) gTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCa < 7:22743/139‑1 (MQ=255) tcgtTGAATTGCAATTTTATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCcgc < 6:356006/98‑1 (MQ=255) tcgtTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCcgc > 5:356006/1‑98 (MQ=255) tcgtTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCATGGTTTTTGTCCACGAAGCAGAAGAATAAAAATGTCTTAATCAAAACTTTCTCCGGCCGGGTACGGTTTTTTTATTGGTTTCGCTGAGCATATAGt > 5:323634/1‑138 (MQ=255) tcgtTGAATTGCAATTTGATAAG‑AAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGGAAGGTTTTTTTAATGGTTTCTCTGAGCATAAAGTTa > 1:17484/1‑139 (MQ=255) gtTGAATTGCAATTTGATAAGAAAAACGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATAAAGTTAt < 8:91835/139‑1 (MQ=255) ccAATTTTATAATAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATAAAGTTATTTCGtat < 1:56839/137‑3 (MQ=255) aTTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATAAAGTTATTTCGTTTTTcc > 2:21281/1‑139 (MQ=255) tGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATAAAGTTATTTCGTTTTTCCTa < 2:234088/138‑1 (MQ=255) | GGTTCTTCGCTGAAGCTACATTTGGCCTGCACCACAAGCAGCTTATGTCAGATGACATTTCAGAAGGCATTATTCAGTTCTTAGAGGAATACCACAACTTCAATCCGGACGTTACCGTCGTTGAATTGCAATTTGATAAGAAAAAAGGCTTCTCCGCCTTGGTTTTTGTCAACGAAGCAGAAGAATAAAAATGTCTTAATCAAACCTTACTCCGCGCGGGTAAGGTTTTTTTAATGGTTTCTCTGAGCATAAAGTTATTTCGTTTTTCCTA > CP006881/3905429‑3905699 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |