| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 1,644,786 | C→T | 15.7% | G44G (GGC→GGT) | U712_08460 → | Succinyl‑CoA ligase [ADP‑forming] subunit alpha |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 1,644,786 | 0 | C | T | 15.7% | 294.2 / 38.2 | 116 | G44G (GGC→GGT) | U712_08460 | Succinyl‑CoA ligase [ADP‑forming] subunit alpha |
| Reads supporting (aligned to +/- strand): ref base C (46/51); new base T (10/8); total (56/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.32e-01 | |||||||||||
Only 100 of 117 total aligned reads displayed.
AATAATGAGTGTTTTCATTAATAAAGATACAAGAGTTATTGTGCAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAACGCGTCTGTTATATATGTGCCCGCACCGTTTGCAGCTGATGCGATTATGGAAGCGGTAGATGCGGAGCTT > CP006881/1644651‑1644924 | aataatGAGTGTTTTCATTAATAAAGATACAAGAGTTATTGTGCAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCgg > 8:102294/1‑138 (MQ=255) atGAGTGTTTTCATTAATAAAGATACAAGAGTTATTGTGCAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACa < 4:159368/138‑1 (MQ=255) tGAGTGTTTTCATTAATAAAGATACAAGAGTTATTGTGCAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAg > 1:251116/1‑138 (MQ=255) aGTGTTTTCATTAATAAAGATACAAGAGTTATTGTGCAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAg > 6:185721/1‑139 (MQ=255) gtgtTTTCATTAATAAAGATACAAGAGTTATTGTGCAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGc > 4:290375/1‑139 (MQ=255) ttttCATTAATAAAGATACAAGAGTTATTGTGCAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCgg > 7:99184/1‑138 (MQ=255) ttttCATTAATAAAGATACAAGAGTTATTGTGCAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCgg > 8:212984/1‑138 (MQ=255) ttttCATTAATAAAGATACAAGAGTTATTGTGCAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCgg > 1:59871/1‑138 (MQ=255) ttCATTAATAAAGATACAAGAGTTATTGTGCAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCTTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAg > 3:29576/1‑139 (MQ=255) ttCATTAATAAAGATACAAGAGTTATTGTGCAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTCGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAg > 1:186097/1‑139 (MQ=255) tCATTAATAAAGATACAAGAGTTATTGTGCAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAg < 7:354694/138‑1 (MQ=255) cATTAATAAAGATACAAGAGTTATTGTGCAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAgg < 5:185721/138‑1 (MQ=255) aataaAGATACAAGAGTTATTGTGCAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCTCAAATATAGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGAGGAAGGTGTTc > 1:86169/1‑139 (MQ=255) ataaAGATACAAGAGTTATTGTGCAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTc < 1:36329/138‑1 (MQ=255) taaAGATACACGAGTTATTGTGCAAGGGATTCCAGGTGCTACCGCTTTATTTCATACGAAGCAGAGGCTTTAATACGGCACAAATATCGTTGGCGGGGTAACACCTGGAAAAGGTGGAACAGAAGCGGAAGGTGTTCCt < 7:113973/139‑1 (MQ=255) taaAGATACAAGAGTTATTGTGCAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCt < 6:284456/139‑1 (MQ=255) taaAGATACAAGAGTTATTGTGCAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCt < 5:294962/139‑1 (MQ=255) taaAGATACAAGAGTTATTGTGCAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCt < 2:224067/139‑1 (MQ=255) taaAGATACAAGAGTTATTGTGCAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCt < 5:153024/139‑1 (MQ=255) aaaaGATACCAGAGTTATCGTGCACGGGATTACCGGGTCTACCGCTTTATTTCATACGAACCAGAGGCTTGAATACGGAACAAATATCGTTGGCGGTGGAACACCTGGAAACGGCGGCCCAGAAGCGGAAGGGGTTCCt < 8:300015/138‑1 (MQ=255) aTACAAGAGTTATTGTGCAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTAtt < 5:260824/139‑1 (MQ=255) aTACAAGAGTTATTGTGCAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTAtt > 3:91952/1‑139 (MQ=255) tACAAGAGTTATTGTGCAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTAttt < 7:102294/139‑1 (MQ=255) agTTATTGTGCAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGTGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACa < 7:270075/139‑1 (MQ=255) ttATTGTGCAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGt > 7:203561/1‑139 (MQ=255) aTTGTGCAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTgg > 8:23181/1‑139 (MQ=255) cAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGTGGAACAGAAGCGGAAGGTGTTCCTGt > 5:123333/1‑119 (MQ=255) cAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCt > 2:6589/1‑117 (MQ=255) cAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCt < 1:6589/117‑1 (MQ=255) cAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATAc < 6:78597/128‑1 (MQ=255) cAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATAc > 5:78597/1‑128 (MQ=255) cAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAg > 1:192727/1‑139 (MQ=255) cAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAg > 4:67431/1‑139 (MQ=255) aGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGTTGTTCCTGAATTTAATCCAGTGGCTGAAg > 5:52847/1‑137 (MQ=255) aTTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGTGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAATCAGtg > 2:117905/1‑137 (MQ=255) tACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCt < 2:56361/109‑1 (MQ=255) tACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCt > 1:56361/1‑109 (MQ=255) tACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCa > 8:115888/1‑138 (MQ=255) tACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCa > 3:194748/1‑138 (MQ=255) tCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGTGGAACAGAAGCGGAAGGTGTTCCt > 6:10292/1‑102 (MQ=255) tCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGTGGAACAGAAGCGGAAGGTGTTCCt < 5:10292/102‑1 (MQ=255) tCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGTGGAACAGAAGCGGAAGGTGTTCCTGTTTTTAATACAGTGGCTGAAGCAGTTCAaacaacag > 6:331496/1‑137 (MQ=255) tCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGTGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCg > 7:161116/1‑139 (MQ=255) tCTACCGCTTTATTTCATACGAAGCAGATGCATGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCg > 5:135150/1‑139 (MQ=255) cTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGt < 4:311234/103‑1 (MQ=255) aCCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTTCt > 3:47797/1‑99 (MQ=255) aCCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTTCt < 4:47797/99‑1 (MQ=255) aCCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGgcg > 8:221347/1‑139 (MQ=255) tttAATTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCt > 6:159039/1‑136 (MQ=255) ttATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGTGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAAcg > 2:218920/1‑139 (MQ=255) tATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAAcg < 2:59871/138‑1 (MQ=255) aTTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACCGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAAcgc < 6:350712/138‑1 (MQ=255) aTTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAAcgc < 7:23181/138‑1 (MQ=255) tttCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGTGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAAcgcg < 4:55265/138‑1 (MQ=255) tttCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAACGCGt > 5:158669/1‑139 (MQ=255) tttCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAACGCGt < 7:221347/139‑1 (MQ=255) tttCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAACGCGt < 7:191607/139‑1 (MQ=255) tCATCCGACGCAGATGCTTGAATACGGAACAAATATCGTTGGCGGTGAAACACCTGCAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAACGCGTc < 2:192727/138‑1 (MQ=255) tCATACGATGCAGATGCTTGATTACGGCAAAAATATCGTTGGCGGGGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAACGCGTc < 6:135150/138‑1 (MQ=255) tCATACGACGCAGATGCTTGAATACGGCAAAAATATCGTTGGCGGTGTAACACCTGGAAAAGGTGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAACGCGTc < 1:218920/138‑1 (MQ=255) tCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGTAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAACGCGTc < 2:251116/138‑1 (MQ=255) tCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAACGCGTc < 3:296179/138‑1 (MQ=255) tCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAACGCGTc < 7:212984/138‑1 (MQ=255) aTACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAACGCGTCTg < 6:109004/138‑1 (MQ=255) tACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAACGCGTCTGtt < 3:290375/139‑1 (MQ=255) tACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAACGCGTCTGtt < 4:330988/139‑1 (MQ=255) tACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAACGCGTCTGtt < 7:115888/139‑1 (MQ=255) cgCAGATGCTTTAATACGGCACAAATATCGTGGGCGGTGTAACACGTTGAACAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAACGCGTCTGTtatata < 6:346461/138‑1 (MQ=255) aGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGTGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTACCGCGTCTGTtatata > 7:337828/1‑139 (MQ=255) aGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAg > 4:237302/1‑102 (MQ=255) aGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAg < 3:237302/102‑1 (MQ=255) aGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAACGCGTCTGTtatata < 3:67431/139‑1 (MQ=255) aGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAACGCGTCTGTtatata < 8:203561/139‑1 (MQ=255) tGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAACGCGTCTGTTATATATGTGCCCGCa > 7:293413/1‑139 (MQ=255) aaTACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCt < 6:314311/68‑1 (MQ=255) ggCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCTGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGAAGTTCAAACATCCGGCGCTAACGCGTCTGTTATATATGTGCCCGCACCGTTTg > 2:274380/1‑139 (MQ=255) ggCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGgtg > 3:70082/1‑58 (MQ=255) ggCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGgtg < 4:70082/58‑1 (MQ=255) ggCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCt > 6:272692/1‑63 (MQ=255) ggCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCt < 5:272692/63‑1 (MQ=255) ggCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTAtt < 2:190586/68‑1 (MQ=255) ggCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTAtt > 1:190586/1‑68 (MQ=255) gCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAACGCGTCTGTTATATATGTGCCCGCACCGTTTg > 5:273506/1‑138 (MQ=255) cacaAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCt > 4:91585/1‑61 (MQ=255) cacaAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCt < 3:91585/61‑1 (MQ=255) gTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAACGCGTCTGTTATATATGTGCCCGCACCGTTTGCAGCTGATGc < 4:71166/137‑1 (MQ=255) gTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAACGCGTCTGTTATATATGTGCCCGCACCGTTTGCAGCTGATGc > 3:71166/1‑137 (MQ=255) ggCGGTGTAACACCTGGAAAAGGTGGAACAGAAGCGGAAGGTGTTCCt < 6:229807/48‑1 (MQ=255) ggCGGTGTAACACCTGGAAAAGGTGGAACAGAAGCGGAAGGTGTTCCt > 5:229807/1‑48 (MQ=255) ggCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAACGCGTCTGTTATATATGTGCCCGCACCGTTTGCAGCTGATGCGATTa > 5:97713/1‑139 (MQ=255) ggCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAACGCGTCTGTTATATATGTGCCCGCACCGTTTGCAGCTGATGCGAGTa > 1:64849/1‑139 (MQ=255) gtgtAACACCTGGAAACGGCGAACCAGACGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTGCAAACAACCGGCGCTAACGCGTCTGTTATATATGTGCCCGCACCGTTTGCAGCTGATGCGATTATGGa < 4:194748/139‑1 (MQ=255) ggAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACa > 5:321257/1‑45 (MQ=255) ggAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACa < 6:321257/45‑1 (MQ=255) ggAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAACGCGt < 2:80226/82‑1 (MQ=255) ggAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAACGCGTCTGTTATATAtg > 1:66753/1‑94 (MQ=255) ggCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGTCTGAAGCAGTTCAAACAACCGGCGCTAACGCGTCTg < 2:279713/79‑1 (MQ=255) ggCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAACGCGTCTg > 1:279713/1‑79 (MQ=255) ggCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAACGCGTCTGTTATATATGTGCCCGCACCGTTTGCAGCTGATGCGATTATGGAAGCGGTAGATGCGGAGc > 6:97799/1‑139 (MQ=255) cGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAACGCGTCTGTTATATATGTGCCCGCACCGTTTGCAGCTGATGCGATTATGGAAGCGGTAGATGCGGAGCtt > 7:275959/1‑139 (MQ=255) | AATAATGAGTGTTTTCATTAATAAAGATACAAGAGTTATTGTGCAAGGGATTACAGGTTCTACCGCTTTATTTCATACGAAGCAGATGCTTGAATACGGCACAAATATCGTTGGCGGTGTAACACCTGGAAAAGGCGGAACAGAAGCGGAAGGTGTTCCTGTATTTAATACAGTGGCTGAAGCAGTTCAAACAACCGGCGCTAACGCGTCTGTTATATATGTGCCCGCACCGTTTGCAGCTGATGCGATTATGGAAGCGGTAGATGCGGAGCTT > CP006881/1644651‑1644924 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |