| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 2,598,116 | T→A | 17.4% | M1M (ATG→TTG) † | U712_13370 ← | putative transporter yrhG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 2,598,116 | 0 | T | A | 17.4% | 159.6 / 6.6 | 86 | M1M (ATG→TTG) † | U712_13370 | putative transporter yrhG |
| Reads supporting (aligned to +/- strand): ref base T (40/30); new base A (3/13); total (43/43) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.09e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CAAGCAAATACCCAAGCGCGATAAATGCACCGCCTAAAAACCCCAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAATAACCTGTGTCAAACCAGGCGTTTGAATGCTGCCTAACTTGTATGCATACCCATACAA > CP006881/2597981‑2598247 | cAAGCAAATACCCACGCGCTATAAATGCACCGCCAAAAAACCCCAGCACAAGCCGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCataat < 8:214617/139‑1 (MQ=255) aaGCAAATACCCAAGCGCGATAAATGCACCGCCTAAAAACCCCAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCTTCCGGTTTTCGAAAAGCCataat > 6:87893/1‑138 (MQ=255) aaGCAAATACCCAAGCGCGATAAATGCACCGCCTAAAAACCCCAGCACAAGCAGTGACGGCAGCGGGAGCGTTATTTTTTTCATCCCTGCGTAAATTTCTGCTTCCGCTATTTCATCCGGTTTTAGAAAATCCataat > 6:230028/1‑138 (MQ=255) aGCAAATACCCAAGCGCGATAAATGCACCGCCTAAAGACCCCAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCataata > 8:283707/1‑138 (MQ=255) aGCAAATACCCAAGCGCGATAAATGCACCGCCTAAAAACCCCAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCataata > 2:248133/1‑138 (MQ=255) aGCAAATACCCAAGCGCGATAAATGCACCGCCTAAAAACCCCAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCataata > 1:1883/1‑138 (MQ=255) aGCAAATACCCAAGCGCGATAAATGCACCGCCTAAAAACCCCAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCataata > 4:98509/1‑138 (MQ=255) aGCAAATACCCAAGCGCGATAAATGCACCGCCTAAAAACCCCAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCataata > 5:257497/1‑138 (MQ=255) aGCAAATACCCAAGCGCGATAAAAGCACCGCCTAAAAACCCCAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTACGCTATTTCATCCGGTTTTAGAAAAGCCaaaata > 2:266271/1‑138 (MQ=255) aaTACCCAAGCGCGATAAATGCACCGCCTAAAAACCCCAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACg > 1:277471/1‑139 (MQ=255) aaTACCCAAGCGCGATAAATGCACCGCCTAAAAACCCCAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACg > 8:242128/1‑139 (MQ=255) atccccACGCGCGATAAATGCACCGCCTAAAAACCCCACCACAAGCAGGGACGGCCGCGGGAGATTTATTTTTTTCATCCATGCTTAAATTGCTGCTTCCGCTATTTCATCCGTTTTTCGAAAAGCCAAAATAAAACGc < 5:335055/136‑1 (MQ=255) aGCGCGATAAATGCACCGCCTAAAACCCCCAGCACAAGCAGTTACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTTTTTAATACGGTTTTCGAAAAGCCAAAATAAAACGCCTCCAt > 3:144172/1‑138 (MQ=255) aGCGCGATAAATGCACCGCCTAAAAACCCCAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTAATACCATCTTCAATTGCTGCTTCCTCTATTTCATCCGGTTTTCGAAAAGCAATAAAAAAACTccaccaa > 2:356163/1‑137 (MQ=255) gcgcGATAAATGCACCGCCTAAAAACCCCAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTa > 1:86415/1‑139 (MQ=255) cgATAAATGCACCGCCTAAAAACCCCAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTActt > 8:11628/1‑139 (MQ=255) gATAAATGCACCGCCTAAAAACCCCAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTActtc > 7:224263/1‑139 (MQ=255) tAAATGCACCGCCTAAAAACCCCAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCAATTActtct > 8:51657/1‑138 (MQ=255) tAAATGCACCGCCTAAAAACCCCAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCCTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAAAAAAACGCCTCCATTActtct > 1:261619/1‑138 (MQ=255) aaTGCACCCCCTAAAAACCCCTCCACATGCTGTGACGGCAGCGGTAGCTTTATTTTTTTCATCGCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCTAAAAGCAATAATAAAACGCCTCCATTActtcttct < 6:173877/139‑1 (MQ=255) gCACCGCCTAAAAACCCCAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCtttt > 8:23909/1‑139 (MQ=255) cccGCCTAAAAACCCCACCACAAGCAGTGACGGCAGGGGTAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCTAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTtct < 1:266271/138‑1 (MQ=255) aCCGCCTAAAAACCCCAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCTAAAAGCCAAAAAAAAACGCCTCCATTACTTCTTCTTTtct < 7:23909/139‑1 (MQ=255) aCCGCCTAAAAACCCCAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTtct < 3:98509/139‑1 (MQ=255) aCCGCCTAAAAACCCCAGCACAAGCAGTGACGGCAGCGGGAGCTTTAATTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCAAAAATAAAACTCCTCCAATACTTCTTCATTtc > 3:78508/1‑138 (MQ=255) ccGCCTAAAAACCCCAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTtctc > 6:83591/1‑139 (MQ=255) ccGCCTAAAAACCCCAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTtct > 7:200446/1‑138 (MQ=255) ccGCCTAAAAACCCCAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTtct > 8:232703/1‑138 (MQ=255) ccGCCTAAAAACCCCAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTtct > 4:151967/1‑138 (MQ=255) ccGCCTAAAAACCCCAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTtct > 3:6679/1‑138 (MQ=255) ccGCCTAAAAACCCCAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTtct > 3:242236/1‑138 (MQ=255) ccGCCTAAAAACCCCAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTtct > 3:174879/1‑138 (MQ=255) gCCTAAAAACCCCAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTca > 8:144556/1‑138 (MQ=255) gCCTAAAAACCCCAGCACAAGCAGTGACGGCAGACGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAACCCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTca > 7:240293/1‑138 (MQ=255) ccAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCGATTTCATCCGGTTTTCGAAAAGCCATAATAAAACTCCTCCATTACTTCTTCTTTTCTCACAGTTaggg > 6:202844/1‑133 (MQ=255) ccAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCACTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCAATACTTCTTCTTTTCTCACAGTTATGc > 8:302876/1‑136 (MQ=255) cAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAATCCATAATAAAACGCCTCCATTACTTCTTCTTTTATCACAGTTATGCAAg > 2:111703/1‑138 (MQ=255) cAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAg > 6:202277/1‑138 (MQ=255) cAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAg > 8:115116/1‑138 (MQ=255) cAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGCTTTTCGAAAAGCCAAAATAAAACGCCTCCAATACTTCTTCTTTTCTCACAGTTATGCAAg > 8:226915/1‑138 (MQ=255) cAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTAATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACATTTATGCAAg > 6:300563/1‑138 (MQ=255) cAGCACAAGCAGTGACGGCAGCGGGAGCGTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTACGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCAATTAATTCTTCTTTTCTCACAGTTAttaaag > 8:128047/1‑133 (MQ=255) aaGCAGAGACGGCAGCGGGAGCTATATTTTTTACATCCCAGCATCAATTGCTGCTTCCGCTATTTAAACCCGTTTTCGAAAAGCCATAATAAAACGCCTCCAATACTACTTCTTTTCTCACAGTTATGCAAGAAAgcc > 6:92964/1‑136 (MQ=255) gCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTAt > 8:212462/1‑125 (MQ=255) gCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAACCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTAt < 7:212462/125‑1 (MQ=255) tGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACCCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATaaa > 4:36547/1‑138 (MQ=255) aCGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGGTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTATAACAGTTAATCAAGAAAGGCAATaaaa > 3:43720/1‑137 (MQ=255) ggCTGCGGGAGCTTTATTTTTAGCATCCCTGCTTCAATTGCTGCTGCCGCTTTTTCACCCGTTTTACTAAAAGCAAAAAAAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAgg < 2:153872/139‑1 (MQ=255) gCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGgcagc > 2:245725/1‑139 (MQ=255) gCGGGAGCGTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTAATCCGGTTTTCGAAAAGCCATAAAAAAACGCCACCAGTACATCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGgaagc > 1:178829/1‑139 (MQ=255) cGGTAGGTTTATTTTTTTCATCCCTTCTTCAATTGCTGCTTCCGATATTTCATCCGGTTTTCGAAAACCCAAAAAAACACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGgcagca < 3:65631/139‑1 (MQ=255) cGGGTGGTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCCAAAACCAAAAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGgcagca < 7:94445/139‑1 (MQ=255) cGGGAGCTTTTTTTTTTTCATCCCTGCTTCAATTGCTGCTTCCTTTATTTCATCCGCTTTTCTAAAAGCCATAAAAAAACGCCTCCATTACTTCTTCTTTTGTCACAGTTATGCAAGAAAGGCAATAAAAAAGgcagca < 2:152848/139‑1 (MQ=255) cGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGgcagca < 7:242128/139‑1 (MQ=255) cGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGgcagca < 7:89026/139‑1 (MQ=255) cGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGgcagca < 1:245725/139‑1 (MQ=255) cGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGgcagca < 1:248133/139‑1 (MQ=255) cGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTGCCGCTATTTCATCCGGTTTTCCAAAAGCCATAAAAACACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGgcagca < 5:271672/139‑1 (MQ=255) cGGGAGCTTTATTTTTTTAATCCCTGCTTAAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCAAAAAAAACACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGgcagca < 1:291017/139‑1 (MQ=255) gCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGgcagca > 6:82133/1‑134 (MQ=255) gCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGgcagca < 5:82133/134‑1 (MQ=255) gCTTTATTTTTTTCATACCTGCTTCAATTGCTGCTTACGCTATTTAATACGGTTTTCGAAAAACCATAATAAAACGCCTCCATTACTTCTTAGTTTATCACAGTTAAGCAAAAAAGGCAATAAAAAAGGCAGCAcaaa > 8:132874/1‑135 (MQ=255) cTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCaaa < 8:224263/139‑1 (MQ=255) ttATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAAt > 8:146332/1‑138 (MQ=255) tttttttCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAATAAc < 7:283707/138‑1 (MQ=255) tttttttCAACCTTGATTAATTTCCTGCTTCGGATATTTCAATCGTTTTTCGAAACGCCATAAAAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAATAAc < 7:226915/138‑1 (MQ=255) tCATCCCTCATTCAATTGCTGCTTCCGCTATTTCATCCGTTTTGCGAAAAGCCATAAAAACACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAATAACCTgtgt < 7:232703/138‑1 (MQ=255) cTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTGGAAACCCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAATAACCTGTGTCAAACCa < 5:87893/139‑1 (MQ=255) cttaatttGCTTCTTCCTTTATTTATTCCGTTTTTCTAATAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAATAACCTGTGTCAAACCAgg < 4:144172/132‑1 (MQ=255) cTTCATTTGCCGCTTCCGATATTTCATCCGTTTATATAAAATCCAAAAAAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAATAACCTGTGTCAAACCAgg < 7:132874/138‑1 (MQ=255) cTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAATAACCTGTGTCAAACCAgg < 7:144556/138‑1 (MQ=255) cTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAATAACCTGTGTCAAACCAgg < 3:151967/138‑1 (MQ=255) aaTTGCGGCTTCCGCTATTACATCGTGTTTTCCAAAAGCAATAATAACACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAATAACCTGTGTCAAACCAGGCGtt < 4:321275/138‑1 (MQ=255) ttGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGgcagca > 8:57828/1‑107 (MQ=255) ttGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGgcagca < 7:57828/107‑1 (MQ=255) ctgctTCCGCAATTTCATCCGGTTTTCTAAAAGCCATAAAAACACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAATAACCTGTGTCAAACCAGGCGTTTGAAtg < 3:71342/139‑1 (MQ=255) ccccgccGCTATTTCACCCGGTTTTCCAAAACCAAAAATAACACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAATAACCTGTGTCAAACCAGGCGTTTGAAtgc < 1:137490/134‑1 (MQ=255) tctaccGCTATTTCCTCCTTTAATCGAAACGCCATATTAAAACGCCTCCATTCCTGCTTCAGTTCTCACCGCAATGCAAGAAACGCAAAAAAAAAGGCAGCACTCAACTAACCTGTGTCACACCACGCGTTAGAAtgat > 8:286820/5‑137 (MQ=255) gctTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAATAACCTGTGTCAAACCAGGCGTTTGAAtgct > 2:117137/1‑139 (MQ=255) ctTCCGATAATTCATCGGTGTTCCTAAAACCCAAAAAAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAATAACCTGTGTCAAACCAGGCGTTTGAAtgc < 4:213505/137‑1 (MQ=255) ccGCTATTTCCACCGGTTTGCCAACAGCCAAAATAACACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAATAACCTGTGTCAAACCAGGCGTTTGAATGCTGCCt < 5:37619/139‑1 (MQ=255) ccGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAATAACCTGTGTCAAACCAGGCGTTTGAAtgctgc < 7:115116/137‑1 (MQ=255) ccGATATTCCACCCGGTCTACCAAAACCAAAAAAAACACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAATAACCTGTGTCAAACCAGGCGTTTGAATGCTGCCt < 5:47493/139‑1 (MQ=255) cGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAATAACCTGTGTCAAACCAGGCGTTTGAATGCTGCCTa < 1:117137/139‑1 (MQ=255) aTTTCTTCGGTTTTTCTAAAACCATTAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAATAACCTGTGTCAAACCAGGCGTTTGAATGCTGCCTAACt < 4:43720/138‑1 (MQ=255) tttCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAATAACCTGTGTCAAACCAGGCGTTTGAATGCTGCCTAACtt < 5:202277/138‑1 (MQ=255) ttacATCCGGTTTTCGAAAAGCAAAAAAAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAATAACCTGTGTCAAACCAGGCGTTTGAATGCTGCCTAACtt < 4:6679/135‑1 (MQ=255) ttaaTCCGGTTTTCTAAACGCATTAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATTCAAGAAAGGCTATAAAAAAGGCAGCACTCAAATAACCTGTGTCAAACCAGGCGTTTGAATGCTGCCTAACTTg < 8:240293/135‑1 (MQ=255) ttCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAATAACCTGTGTCAAACCAGGCGTTTGAATGCTGCCt < 5:189810/132‑1 (MQ=255) ttCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAATAACCTGTGTCAAACCAGGCGTTTGAATGCTGCCt > 6:189810/1‑132 (MQ=255) tCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAATAACCTGTGTCAAACCAGGCGTTTGAATGCTGCCTAACTTGt < 2:277471/138‑1 (MQ=255) tCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAATAACCTGTGTCAAACCAGGCGTGTTAATGCTGCCTAACTTTTATg > 7:320335/1‑138 (MQ=255) gTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAATAACCTGTGTCAAACCAGGCGTTTGAATGCTGCCTAACTTGTATGCATAc < 7:11628/139‑1 (MQ=255) ttCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAATAACCTGTGTCAAACCAGGCGTTTGAATGCTGCCTAACTTGTATGCATACCCa > 2:96126/1‑139 (MQ=255) aaaCCCAAAAAAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAATAACCTGTGTCAAACCAGGCGTTTGAATGCTGCCTAACTTGTATGCATACCCATacaa < 4:242236/139‑1 (MQ=255) | CAAGCAAATACCCAAGCGCGATAAATGCACCGCCTAAAAACCCCAGCACAAGCAGTGACGGCAGCGGGAGCTTTATTTTTTTCATCCCTGCTTCAATTGCTGCTTCCGCTATTTCATCCGGTTTTCGAAAAGCCATAATAAAACGCCTCCATTACTTCTTCTTTTCTCACAGTTATGCAAGAAAGGCAATAAAAAAGGCAGCACTCAAATAACCTGTGTCAAACCAGGCGTTTGAATGCTGCCTAACTTGTATGCATACCCATACAA > CP006881/2597981‑2598247 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |