| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP006881 | 3,444,749 | A→C | 18.2% | S28A (TCC→GCC) | U712_17685 ← | UPF0750 membrane protein yvjA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP006881 | 3,444,749 | 0 | A | C | 18.2% | 133.4 / 8.1 | 75 | S28A (TCC→GCC) | U712_17685 | UPF0750 membrane protein yvjA |
| Reads supporting (aligned to +/- strand): ref base A (48/12); new base C (2/13); total (50/25) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.89e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CGCCAGCAATAAATAAAGGGATATTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCCATCATATATCCTCCGTTTCTTCCAATGCTCTCCGATAGCATTTTAATCCTTCCCT > CP006881/3444614‑3444880 | cGCCAGCAATAAATAAAGGGATATTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGacac > 1:256279/1‑139 (MQ=255) aaaGGGATAATAATAATCCACTGAACATCCGCTGCTACAAAACCATATGATTTTAAAATCGTACTGATCCCGCGGACCCCGCGGGCGTCAATCTTATGCGG‑AAGAAAAAAAACATA‑AAAGCACACGGCCGTAATCgctg < 7:243903/139‑1 (MQ=255) tatTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTATTCGCTGCTCCTAt > 6:344747/1‑139 (MQ=255) tatTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTAt > 5:88052/1‑139 (MQ=255) tatTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTAt > 6:339703/1‑139 (MQ=255) tatTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTAt > 1:44953/1‑139 (MQ=255) tatTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCGAt > 5:29636/1‑139 (MQ=255) tatTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCGAt > 3:24903/1‑139 (MQ=255) atTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTAt > 3:81957/1‑138 (MQ=255) atTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTAt > 1:106930/1‑138 (MQ=255) aataatCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTCACCCCGCCGGCGGAAATATTATTCGG‑AACAAAAAATAAATA‑AAAGCCCACGGCCGTAATCGCTGCTCCTATCaa < 2:16152/138‑1 (MQ=255) ttCCATTGTAAATCTGCTGCTTAAAAAAAATTTTTTTTTAAAATCGTACTGAACACGCTCCCCCCGCCGGC‑GCAATTTTTTTTGGAAATAAAAAATAAATT‑AACGGCCACGGCCGTAATCGCTGCTCCTATCAATATGt < 4:88583/138‑1 (MQ=255) atCCACTTTAAATACGCGTCTTAAAAACAATATGATTGAAAAATGTTCGTGATCCCGCGCACCCCGCGGGCGGAATTCTTAATCGG‑AAGAAAAAATAAATT‑AAAGCCCACGGCCGTAATCGCTGCTCCTATCAATATGt < 2:196504/139‑1 (MQ=255) tCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGta > 6:160967/1‑139 (MQ=255) tCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGt > 6:110500/1‑138 (MQ=255) tGTACATACGCTGCTTAAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGCCACGGCAGTAATCGCTGCTCCTATCAAAATGTAAACa > 1:257280/1‑138 (MQ=255) tACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATaa > 1:194898/1‑139 (MQ=255) tACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATaa > 3:16585/1‑139 (MQ=255) tACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATa > 6:336343/1‑138 (MQ=255) tACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATa > 7:316600/1‑138 (MQ=255) gctgcaTAAAAACAATATGATTCTAAAAGGGTACTCATCCCGCTGACCCCGCCGGCGGCAATCTTATTCCT‑AACAAAAAAAAAATA‑AACCCCCACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCa < 6:88052/139‑1 (MQ=255) gctTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGCCCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTAAACATAAACCCGCaaa > 5:252668/1‑138 (MQ=255) gctTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACGTT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATTTATACATAATCCCGCaaa > 2:270332/1‑138 (MQ=255) gctTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCaaaa > 7:109155/1‑139 (MQ=255) gctTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCaaaa > 7:343417/1‑139 (MQ=255) gctTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCaaa > 1:296721/1‑138 (MQ=255) gctTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCaaa > 7:66387/1‑138 (MQ=255) gctTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCaaa > 3:45748/1‑138 (MQ=255) gctTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAAAATGTATACATAATCCCGCaaa > 1:342224/1‑138 (MQ=255) gctTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAAACGCTGCTCCTATCAATAATTAAACATAATCCCGCaaa > 1:364150/1‑138 (MQ=255) gctTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACAGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCaaa > 5:184792/1‑138 (MQ=255) gctTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAACGCCCCGGCCGTAATCGCTGCTCCTATCAATATGTTTAAATAATCCCGCaaa > 6:224570/1‑138 (MQ=255) gctTCAAAACCATATGAATGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AATCAAAAATACATT‑AAAGGACACGGCCTTAATAGCTGCTCCTATCAATATGTATACATAATCCCGCaaa > 7:106773/1‑138 (MQ=255) ctTCAAACCCATATGATTGTAAAAGCGTACTGAACCCGCGGCCCCCGCCGGCGGAAATATTATTCGC‑AACCAAAAAAAAATT‑AAAGCACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCaaa < 5:160967/137‑1 (MQ=255) aaaaaCATTATGATTAAAAAAGCGTCCTCACCCCCCCGCCCCCGCCGGGGGAAATCTTTTAGTC‑AAAAAAAAAAAAATA‑AACCCCCACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCca < 3:230443/138‑1 (MQ=255) aaaCCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACAGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCcaca < 6:184792/139‑1 (MQ=255) aaaCAATTTGATTTTAAATTCGACCTGATCCCGCTCCCCCCGCGGGCGCAATTTTTATTCGC‑AACAAAAAATAAATA‑AACCCCCACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCcaca < 8:316600/139‑1 (MQ=255) aaaCAATATCATTTAAAAATCTTACTTCACCCGCTGCCCCCGCCGGAGTAATTCTTATTCGT‑ACGAAAAAATACATA‑AAAGGCCACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCcaca < 7:179716/139‑1 (MQ=255) cATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACCCGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGt > 5:46648/1‑139 (MQ=255) atatGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGtt > 1:301170/1‑139 (MQ=255) atatGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCGGCTCCTATCAATATTTTTACATAATCACGCAAAAACCACCATGtt > 1:182973/1‑139 (MQ=255) tatGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑ATGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGttt > 4:363117/1‑139 (MQ=255) tatGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGttt > 5:350237/1‑139 (MQ=255) tatGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGttt > 3:160177/1‑139 (MQ=255) tGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAAAGTTTTATTcc > 4:24381/1‑139 (MQ=255) aaaTCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTAc > 5:241512/1‑139 (MQ=255) attttACTGTTCCGGATCACCCGGGCGGCGTCATTATTA‑TGGG‑TAACAAAAAAAAATTAAAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGt < 6:252668/135‑1 (MQ=255) aTCGTACTTATCCCGCGCCCCCCGCCGGCGTCAATATTATTGGT‑AATAAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGt < 2:301170/139‑1 (MQ=255) aTCGTACTGCGCCGGCTGACCCCGCCGGCGTCAATATTATTCGT‑AATAAAAAATACATT‑AATGCCCACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGt < 2:194898/139‑1 (MQ=255) cGTTCTGATCGGTCTGACCGCGAGGGCTGAAATTTTTTTCTG‑ATTCAAAAATACATA‑AATGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTc < 8:106773/138‑1 (MQ=255) gTACTGATCCCGCGGCCCCCGCCGGCGGCAATATTATTCGG‑AACAAAAAAAAAATA‑ACCGCCCACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTcc < 4:45748/138‑1 (MQ=255) tACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCca > 2:279695/1‑138 (MQ=255) tACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCGGGTCCTATCAAATTGTATACATAATCCCGCAAAATCCACAAGGTTTTATTACGTACGTCcat > 2:117897/1‑139 (MQ=255) tACTGATCCCGCGGACCCCGCGGGCGGAAATATTATTCGG‑AACCAAAAATAAATT‑AACGCACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCcat < 2:106930/139‑1 (MQ=255) ctcaccccGCTCACCCCGCCGGCGGAAATCTTATTCGG‑AACAAAAAAAACATA‑AAAGGCCACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCcat < 5:344747/132‑1 (MQ=255) cTGACCCCGCTCACCCCGCCGGCGGAAATCTTATTCGG‑AACAAAAAATACATA‑AACGGCCACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCcat < 5:339703/137‑1 (MQ=255) cccGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCCATCttatat > 2:293417/1‑139 (MQ=255) cccGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCCATCatata > 2:305417/1‑138 (MQ=255) ccccGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCCATCATATATCCTCCGtt > 8:353259/1‑139 (MQ=255) ccccGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATAAATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCCATCATATATCCTCCGtt > 8:253420/1‑139 (MQ=255) ccccGCCGGCGGAAAAATAATTCGC‑AACAAAAAAAACATA‑AACGCACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCCATCATATATCCTCCGtt < 2:62366/139‑1 (MQ=255) cccGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCCATCATATATCCTCCGttt > 6:145772/1‑139 (MQ=255) gcaaaTCTAATCCGC‑AACAAAAAATACATA‑AACCCCCACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCCATCATATATCCTCCGTTTCTTCCAATg < 6:1846/136‑1 (MQ=255) gcAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCCATCATATATACTCCGTTTCTTCCAATGc > 2:102908/1‑139 (MQ=255) tATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCCATCATATATCCTCCGTTTCTTCCAATGCTCTCCg > 8:225457/1‑138 (MQ=255) aaGCAAAAATACATT‑AAAGGACACGTCCGTAATCGCTGCTCCTATCAATATGTATACATAATCACGCAAAATCCACAATGTTTTATTCCGTACGTACATCATATATCCTCCGTTTCTTCCAATGCTCTCAGATAGCAtt > 8:317763/1‑139 (MQ=255) aaGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCCATCATATATCCTCCTTTTCTTCCAATGCTCTCCGATAGCAtt > 8:268089/1‑139 (MQ=255) aaGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCCATCATATATCCTCCGTTTCTTCCAATGCTCTCCGATAGCAtt > 3:157978/1‑139 (MQ=255) aaGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCCATCATATATCCTCCGTTTCTTCCAATGCTCTCCGATAGCAtt > 8:275017/1‑139 (MQ=255) agaaaaaaTACATT‑AACGCACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCCATCATATATCCTCCGTTTCTTCCAATGCTCTCCGATAGCAttt < 8:343417/136‑1 (MQ=255) aaaTACAAT‑AACGCACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCCATCATATATCCTCCGTTTCTTCCAATGCTCTCCGATAGCATTTTAATc < 8:47402/139‑1 (MQ=255) aaaCATT‑ACAGCCCACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCCATCATATATCCTCCGTTTCTTCCAATGCTCTCCGATAGCATTTTAATCCt < 4:81957/137‑1 (MQ=255) cATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCCATCATATATCCTCCGTTTCTTCCAATGCTCTCCGATAGCATTTTAATCCTTcc < 7:225457/139‑1 (MQ=255) cATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCCATCATATATCCTCCGTTTCTTCCAATGCTCTCCGATAGCATTTTAATCCTTcc < 8:265660/139‑1 (MQ=255) tt‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCGGTAGGTCCATCAAATATCCTCCGATACTTCAAAAGCTCTCCGATAGCATTTTAATCCTGCCCt > 4:37432/1‑139 (MQ=255) tt‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCCATCATATATCCTCCGTTTCTTCCAATGCTCTCCGATAGCATTTTAATCCTTCCCt > 4:241093/1‑139 (MQ=255) | CGCCAGCAATAAATAAAGGGATATTAATAATCCACTGTACATACGCTGCTTCAAAACCATATGATTGTAAAATCGTACTGATCCCGCTGACCCCGCCGGCGGCAATCTTATTCGG‑AAGCAAAAATACATT‑AAAGGACACGGCCGTAATCGCTGCTCCTATCAATATGTATACATAATCCCGCAAAATCCACAATGTTTTATTCCGTACGTCCATCATATATCCTCCGTTTCTTCCAATGCTCTCCGATAGCATTTTAATCCTTCCCT > CP006881/3444614‑3444880 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |